EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021177 (Gene tree)
Gene ID: -
Gene Symbol: Zfp108
Alias: -
Full Name: zinc finger protein 108
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 8021 bases
Position: chr19:19757550-19765570
Accession: 1891198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	1	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	2	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	3	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	4	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	5	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	6	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	7	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	8	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	9	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	10	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	11	12
MGP_PahariEiJ_P0046221	zf-C2H2	PF00096.26	1e-62	12	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	1	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	2	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	3	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	4	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	5	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	6	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	7	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	8	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	9	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	10	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	11	12
MGP_PahariEiJ_P0046220	zf-C2H2	PF00096.26	1.2e-62	12	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	1	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	2	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	3	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	4	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	5	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	6	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	7	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	8	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	9	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	10	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	11	12
MGP_PahariEiJ_P0046222	zf-C2H2	PF00096.26	1.3e-62	12	12
MGP_PahariEiJ_P0046221	zf-met	PF12874.7	1.6e-07	1	1
MGP_PahariEiJ_P0046220	zf-met	PF12874.7	1.8e-07	1	1
MGP_PahariEiJ_P0046222	zf-met	PF12874.7	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0046222	-	2348	-	MGP_PahariEiJ_P0046222	647 (aa)	-	-
MGP_PahariEiJ_T0046221	-	2516	-	MGP_PahariEiJ_P0046221	638 (aa)	-	-
MGP_PahariEiJ_T0046220	-	2489	-	MGP_PahariEiJ_P0046220	643 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0021177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0021177	Zfp108	66	48.558	MGP_PahariEiJ_G0021003	Zfp628	63	48.241
MGP_PahariEiJ_G0021177	Zfp108	61	40.000	MGP_PahariEiJ_G0026165	Zfp64	70	46.316
MGP_PahariEiJ_G0021177	Zfp108	99	51.781	MGP_PahariEiJ_G0017441	Zfp354a	99	51.781
MGP_PahariEiJ_G0021177	Zfp108	57	36.628	MGP_PahariEiJ_G0021012	-	67	30.319
MGP_PahariEiJ_G0021177	Zfp108	55	35.714	MGP_PahariEiJ_G0021013	Zfp784	69	35.714
MGP_PahariEiJ_G0021177	Zfp108	99	46.561	MGP_PahariEiJ_G0012663	-	98	42.130
MGP_PahariEiJ_G0021177	Zfp108	65	54.839	MGP_PahariEiJ_G0019324	Zkscan4	68	54.839
MGP_PahariEiJ_G0021177	Zfp108	67	53.448	MGP_PahariEiJ_G0022533	Zfp637	85	50.000
MGP_PahariEiJ_G0021177	Zfp108	73	42.197	MGP_PahariEiJ_G0023018	Zfp319	90	42.197
MGP_PahariEiJ_G0021177	Zfp108	58	43.210	MGP_PahariEiJ_G0019173	Zfp236	66	43.210
MGP_PahariEiJ_G0021177	Zfp108	93	78.428	MGP_PahariEiJ_G0021178	Zfp93	99	86.158
MGP_PahariEiJ_G0021177	Zfp108	99	74.665	MGP_PahariEiJ_G0021173	Zfp235	100	73.778
MGP_PahariEiJ_G0021177	Zfp108	99	58.056	MGP_PahariEiJ_G0021172	Zfp112	99	58.056
MGP_PahariEiJ_G0021177	Zfp108	79	52.941	MGP_PahariEiJ_G0012839	-	69	52.941
MGP_PahariEiJ_G0021177	Zfp108	79	53.955	MGP_PahariEiJ_G0012724	Zfp420	98	53.955
MGP_PahariEiJ_G0021177	Zfp108	72	36.124	MGP_PahariEiJ_G0022097	Repin1	92	34.967
MGP_PahariEiJ_G0021177	Zfp108	77	36.269	MGP_PahariEiJ_G0022203	Prdm5	71	46.154
MGP_PahariEiJ_G0021177	Zfp108	99	45.299	MGP_PahariEiJ_G0013708	-	88	45.299
MGP_PahariEiJ_G0021177	Zfp108	99	45.708	MGP_PahariEiJ_G0015756	Zfp748	100	46.318
MGP_PahariEiJ_G0021177	Zfp108	99	44.326	MGP_PahariEiJ_G0017548	Zfp39	92	42.857
MGP_PahariEiJ_G0021177	Zfp108	100	45.227	MGP_PahariEiJ_G0023460	Zfp945	97	45.519
MGP_PahariEiJ_G0021177	Zfp108	99	58.246	MGP_PahariEiJ_G0021180	Zfp94	93	58.246
MGP_PahariEiJ_G0021177	Zfp108	99	45.890	MGP_PahariEiJ_G0017434	Zfp354b	98	45.890
MGP_PahariEiJ_G0021177	Zfp108	99	43.880	MGP_PahariEiJ_G0015741	Zfp759	99	43.880
MGP_PahariEiJ_G0021177	Zfp108	99	45.455	MGP_PahariEiJ_G0021668	Zfp882	99	45.333
MGP_PahariEiJ_G0021177	Zfp108	70	44.315	MGP_PahariEiJ_G0029075	Zbtb17	61	44.315
MGP_PahariEiJ_G0021177	Zfp108	60	49.206	MGP_PahariEiJ_G0017280	Gfi1	100	49.206
MGP_PahariEiJ_G0021177	Zfp108	99	50.505	MGP_PahariEiJ_G0019959	Zfp251	94	50.505
MGP_PahariEiJ_G0021177	Zfp108	56	35.094	MGP_PahariEiJ_G0024597	Gtf3a	78	35.094
MGP_PahariEiJ_G0021177	Zfp108	99	53.982	MGP_PahariEiJ_G0025706	Zfp661	96	53.982
MGP_PahariEiJ_G0021177	Zfp108	72	37.895	MGP_PahariEiJ_G0021209	Zfp574	87	38.421
MGP_PahariEiJ_G0021177	Zfp108	99	51.867	MGP_PahariEiJ_G0023178	Zfp1	100	51.867
MGP_PahariEiJ_G0021177	Zfp108	70	40.000	MGP_PahariEiJ_G0021011	-	79	40.870
MGP_PahariEiJ_G0021177	Zfp108	100	50.000	MGP_PahariEiJ_G0017567	Zfp867	96	51.163
MGP_PahariEiJ_G0021177	Zfp108	99	45.299	MGP_PahariEiJ_G0013709	-	88	45.299
MGP_PahariEiJ_G0021177	Zfp108	58	52.727	MGP_PahariEiJ_G0013707	Zfp768	54	50.883
MGP_PahariEiJ_G0021177	Zfp108	57	49.231	MGP_PahariEiJ_G0016960	Zbtb49	73	49.275
MGP_PahariEiJ_G0021177	Zfp108	99	48.108	MGP_PahariEiJ_G0023447	Zfp51	87	48.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021177	Zfp108	99	47.826	ENSG00000159915	ZNF233	99	47.826	Homo_sapiens
MGP_PahariEiJ_G0021177	Zfp108	99	49.123	ENSAMEG00000006122	ZNF233	99	47.027	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021177	Zfp108	99	51.988	ENSCATG00000015076	ZNF233	99	48.352	Cercocebus_atys
MGP_PahariEiJ_G0021177	Zfp108	99	54.915	ENSCSAG00000003326	ZNF233	99	54.915	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021177	Zfp108	99	51.969	ENSCHOG00000010443	ZNF233	99	51.969	Choloepus_hoffmanni
MGP_PahariEiJ_G0021177	Zfp108	99	50.437	ENSCANG00000032081	ZNF233	99	50.437	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021177	Zfp108	96	55.377	ENSCGRG00000015629	-	92	55.377	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0021177	Zfp108	99	57.741	ENSCGRG00000015809	-	99	57.741	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0021177	Zfp108	99	45.598	ENSDNOG00000038729	ZNF233	99	51.841	Dasypus_novemcinctus
MGP_PahariEiJ_G0021177	Zfp108	59	54.762	ENSFALG00000009044	-	100	54.762	Ficedula_albicollis
MGP_PahariEiJ_G0021177	Zfp108	93	50.183	ENSGGOG00000013940	ZNF233	96	50.183	Gorilla_gorilla
MGP_PahariEiJ_G0021177	Zfp108	99	62.896	ENSMFAG00000039215	ZNF233	99	44.925	Macaca_fascicularis
MGP_PahariEiJ_G0021177	Zfp108	99	50.904	ENSMMUG00000012797	ZNF233	99	50.923	Macaca_mulatta
MGP_PahariEiJ_G0021177	Zfp108	66	54.774	ENSMZEG00005024630	-	82	54.774	Maylandia_zebra
MGP_PahariEiJ_G0021177	Zfp108	99	54.915	ENSMICG00000016725	ZNF233	98	54.915	Microcebus_murinus
MGP_PahariEiJ_G0021177	Zfp108	94	76.159	MGP_CAROLIEiJ_G0029327	Zfp93	99	76.159	Mus_caroli
MGP_PahariEiJ_G0021177	Zfp108	100	89.028	MGP_CAROLIEiJ_G0029326	Zfp108	100	89.028	Mus_caroli
MGP_PahariEiJ_G0021177	Zfp108	99	74.851	MGP_CAROLIEiJ_G0029322	Zfp235	100	73.926	Mus_caroli
MGP_PahariEiJ_G0021177	Zfp108	99	67.577	ENSMUSG00000068962	Zfp114	99	67.577	Mus_musculus
MGP_PahariEiJ_G0021177	Zfp108	99	89.720	ENSMUSG00000030486	Zfp108	100	89.720	Mus_musculus
MGP_PahariEiJ_G0021177	Zfp108	99	77.414	ENSMUSG00000055305	Zfp93	100	77.209	Mus_musculus
MGP_PahariEiJ_G0021177	Zfp108	99	73.810	ENSMUSG00000047603	Zfp235	100	72.889	Mus_musculus
MGP_PahariEiJ_G0021177	Zfp108	99	73.661	MGP_SPRETEiJ_G0030416	Zfp235	100	72.741	Mus_spretus
MGP_PahariEiJ_G0021177	Zfp108	91	63.902	MGP_SPRETEiJ_G0030417	Zfp114	99	63.430	Mus_spretus
MGP_PahariEiJ_G0021177	Zfp108	71	82.816	MGP_SPRETEiJ_G0030421	-	99	82.816	Mus_spretus
MGP_PahariEiJ_G0021177	Zfp108	100	90.513	MGP_SPRETEiJ_G0030420	Zfp108	100	90.654	Mus_spretus
MGP_PahariEiJ_G0021177	Zfp108	66	53.125	ENSORLG00015017539	-	73	51.765	Oryzias_latipes_hsok
MGP_PahariEiJ_G0021177	Zfp108	99	48.071	ENSOGAG00000001912	ZNF233	100	48.071	Otolemur_garnettii
MGP_PahariEiJ_G0021177	Zfp108	99	53.061	ENSPPAG00000030145	ZNF233	99	52.030	Pan_paniscus
MGP_PahariEiJ_G0021177	Zfp108	99	53.061	ENSPTRG00000011111	ZNF233	99	52.030	Pan_troglodytes
MGP_PahariEiJ_G0021177	Zfp108	99	45.137	ENSPANG00000010670	ZNF233	99	55.691	Papio_anubis
MGP_PahariEiJ_G0021177	Zfp108	99	68.405	ENSPEMG00000018022	-	99	69.598	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021177	Zfp108	99	55.254	ENSPPYG00000010085	ZNF233	96	45.894	Pongo_abelii
MGP_PahariEiJ_G0021177	Zfp108	99	52.560	ENSPCOG00000015292	ZNF233	99	50.923	Propithecus_coquereli
MGP_PahariEiJ_G0021177	Zfp108	77	72.727	ENSPVAG00000004388	ZNF233	63	72.727	Pteropus_vampyrus
MGP_PahariEiJ_G0021177	Zfp108	99	54.915	ENSRBIG00000035218	ZNF233	99	54.915	Rhinopithecus_bieti
MGP_PahariEiJ_G0021177	Zfp108	99	48.370	ENSRROG00000030619	ZNF233	99	52.030	Rhinopithecus_roxellana
MGP_PahariEiJ_G0021177	Zfp108	99	47.093	ENSTTRG00000011818	ZNF233	99	49.068	Tursiops_truncatus
MGP_PahariEiJ_G0021177	Zfp108	93	54.785	ENSUMAG00000023065	ZNF233	96	54.785	Ursus_maritimus
MGP_PahariEiJ_G0021177	Zfp108	99	62.736	ENSVPAG00000007465	ZNF233	100	62.736	Vicugna_pacos
MGP_PahariEiJ_G0021177	Zfp108	56	50.273	ENSXMAG00000027300	-	73	50.273	Xiphophorus_maculatus