EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021439 (Gene tree)
Gene ID: 110336551
Gene Symbol: Rbpms
Alias: 2010300K22Rik|2700019M19Rik|hermes
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 152236 bases
Position: chr19:50930976-51083211
Accession: 110336551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0047060	RRM_1	PF00076.22	1.9e-11	1	1
MGP_PahariEiJ_P0047058	RRM_1	PF00076.22	2e-11	1	1
MGP_PahariEiJ_P0047059	RRM_1	PF00076.22	2e-11	1	1
MGP_PahariEiJ_P0047067	RRM_1	PF00076.22	2.2e-11	1	1
MGP_PahariEiJ_P0047068	RRM_1	PF00076.22	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0047057	-	2279	-	MGP_PahariEiJ_P0047057	62 (aa)	-	-
MGP_PahariEiJ_T0047070	-	318	-	-	- (aa)	-	-
MGP_PahariEiJ_T0047059	-	2548	-	MGP_PahariEiJ_P0047059	197 (aa)	-	UPI000A30BFF5
MGP_PahariEiJ_T0047058	-	2457	XM_021219173	MGP_PahariEiJ_P0047058	197 (aa)	XP_021074832	UPI000A30BFF5
MGP_PahariEiJ_T0047068	-	1035	-	MGP_PahariEiJ_P0047068	218 (aa)	-	-
MGP_PahariEiJ_T0047069	-	462	-	MGP_PahariEiJ_P0047069	64 (aa)	-	UPI0003F4863A
MGP_PahariEiJ_T0047066	-	528	-	-	- (aa)	-	-
MGP_PahariEiJ_T0047067	-	1047	XM_021219172	MGP_PahariEiJ_P0047067	220 (aa)	XP_021074831	UPI000A311F7A
MGP_PahariEiJ_T0047064	-	401	-	MGP_PahariEiJ_P0047064	56 (aa)	-	-
MGP_PahariEiJ_T0047065	-	619	-	-	- (aa)	-	-
MGP_PahariEiJ_T0047062	-	846	-	MGP_PahariEiJ_P0047062	93 (aa)	-	UPI0000605C80
MGP_PahariEiJ_T0047063	-	545	-	MGP_PahariEiJ_P0047063	69 (aa)	-	-
MGP_PahariEiJ_T0047060	-	2376	XM_021219174	MGP_PahariEiJ_P0047060	191 (aa)	XP_021074833	UPI000A312587
MGP_PahariEiJ_T0047061	-	1383	-	MGP_PahariEiJ_P0047061	197 (aa)	-	UPI000A30BFF5

Gene Model

Click here to download MGP_PahariEiJ_G0021439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0021439	Rbpms	90	72.432	MGP_PahariEiJ_G0015232	Rbpms2	88	70.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSG00000157110	RBPMS	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSAPOG00000022304	RBPMS	99	78.974	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0021439	Rbpms	93	97.561	ENSAMEG00000001522	RBPMS	93	97.561	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021439	Rbpms	66	79.699	ENSACIG00000011395	RBPMS	76	77.465	Amphilophus_citrinellus
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSAOCG00000007731	RBPMS	99	78.974	Amphiprion_ocellaris
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSAPEG00000023543	RBPMS	99	78.974	Amphiprion_percula
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSATEG00000018184	RBPMS	99	78.974	Anabas_testudineus
MGP_PahariEiJ_G0021439	Rbpms	100	92.929	ENSACAG00000003012	RBPMS	100	88.384	Anolis_carolinensis
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSANAG00000028150	RBPMS	100	98.636	Aotus_nancymaae
MGP_PahariEiJ_G0021439	Rbpms	99	83.590	ENSACLG00000002926	RBPMS	99	79.487	Astatotilapia_calliptera
MGP_PahariEiJ_G0021439	Rbpms	98	81.959	ENSAMXG00000033491	rbpms	99	77.835	Astyanax_mexicanus
MGP_PahariEiJ_G0021439	Rbpms	100	97.273	ENSBTAG00000033727	RBPMS	100	97.273	Bos_taurus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSCJAG00000012366	RBPMS	100	98.182	Callithrix_jacchus
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSCAFG00000006503	RBPMS	100	98.636	Canis_familiaris
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSCAFG00020001031	RBPMS	100	98.636	Canis_lupus_dingo
MGP_PahariEiJ_G0021439	Rbpms	100	90.909	ENSCHIG00000027156	RBPMS	100	86.869	Capra_hircus
MGP_PahariEiJ_G0021439	Rbpms	58	100.000	ENSTSYG00000013982	RBPMS	83	100.000	Carlito_syrichta
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSCPOG00000038597	RBPMS	100	98.636	Cavia_porcellus
MGP_PahariEiJ_G0021439	Rbpms	100	97.970	ENSCCAG00000033226	RBPMS	100	97.970	Cebus_capucinus
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSCATG00000036486	RBPMS	100	98.636	Cercocebus_atys
MGP_PahariEiJ_G0021439	Rbpms	91	99.495	ENSCLAG00000001518	RBPMS	100	99.495	Chinchilla_lanigera
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSCSAG00000015838	RBPMS	100	98.636	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021439	Rbpms	91	98.990	ENSCHOG00000008745	RBPMS	100	98.990	Choloepus_hoffmanni
MGP_PahariEiJ_G0021439	Rbpms	97	92.670	ENSCPBG00000013437	RBPMS	97	87.958	Chrysemys_picta_bellii
MGP_PahariEiJ_G0021439	Rbpms	91	99.495	ENSCANG00000034997	RBPMS	100	99.495	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021439	Rbpms	100	99.545	ENSCGRG00001002814	Rbpms	100	99.545	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021439	Rbpms	91	100.000	ENSCGRG00000006095	Rbpms	100	100.000	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0021439	Rbpms	97	83.854	ENSCSEG00000002777	rbpms	99	80.328	Cynoglossus_semilaevis
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSCVAG00000013975	RBPMS	99	78.974	Cyprinodon_variegatus
MGP_PahariEiJ_G0021439	Rbpms	87	66.667	ENSDARG00000099396	rbpms	100	64.327	Danio_rerio
MGP_PahariEiJ_G0021439	Rbpms	100	95.455	ENSDNOG00000008126	RBPMS	100	91.364	Dasypus_novemcinctus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSETEG00000017582	RBPMS	100	98.182	Echinops_telfairi
MGP_PahariEiJ_G0021439	Rbpms	91	99.495	ENSEASG00005016962	RBPMS	99	99.495	Equus_asinus_asinus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSECAG00000020735	RBPMS	99	99.495	Equus_caballus
MGP_PahariEiJ_G0021439	Rbpms	100	80.711	ENSELUG00000009787	rbpms	100	77.665	Esox_lucius
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSFCAG00000025639	-	100	98.182	Felis_catus
MGP_PahariEiJ_G0021439	Rbpms	88	54.335	ENSFCAG00000022292	-	85	57.692	Felis_catus
MGP_PahariEiJ_G0021439	Rbpms	91	98.990	ENSFDAG00000012078	RBPMS	100	98.990	Fukomys_damarensis
MGP_PahariEiJ_G0021439	Rbpms	100	83.756	ENSFHEG00000000618	rbpms	100	79.695	Fundulus_heteroclitus
MGP_PahariEiJ_G0021439	Rbpms	77	56.291	ENSGMOG00000009646	-	100	56.291	Gadus_morhua
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSGAFG00000016566	RBPMS	99	78.974	Gambusia_affinis
MGP_PahariEiJ_G0021439	Rbpms	100	74.619	ENSGACG00000019471	rbpms	100	74.112	Gasterosteus_aculeatus
MGP_PahariEiJ_G0021439	Rbpms	63	91.667	ENSGAGG00000023634	RBPMS	55	88.095	Gopherus_agassizii
MGP_PahariEiJ_G0021439	Rbpms	99	83.590	ENSHBUG00000005888	RBPMS	99	79.487	Haplochromis_burtoni
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSHGLG00000002303	RBPMS	100	98.636	Heterocephalus_glaber_female
MGP_PahariEiJ_G0021439	Rbpms	91	99.495	ENSHGLG00100008787	RBPMS	100	99.495	Heterocephalus_glaber_male
MGP_PahariEiJ_G0021439	Rbpms	97	84.896	ENSHCOG00000005774	rbpms	99	80.729	Hippocampus_comes
MGP_PahariEiJ_G0021439	Rbpms	97	79.167	ENSIPUG00000012459	RBPMS	99	76.562	Ictalurus_punctatus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSSTOG00000026546	RBPMS	100	98.182	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSJJAG00000014024	Rbpms	100	98.182	Jaculus_jaculus
MGP_PahariEiJ_G0021439	Rbpms	89	67.797	ENSKMAG00000006377	RBPMS	88	70.621	Kryptolebias_marmoratus
MGP_PahariEiJ_G0021439	Rbpms	100	83.249	ENSLBEG00000027989	RBPMS	97	82.286	Labrus_bergylta
MGP_PahariEiJ_G0021439	Rbpms	91	86.667	ENSLOCG00000013199	RBPMS	98	82.222	Lepisosteus_oculatus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSLAFG00000000209	RBPMS	100	98.182	Loxodonta_africana
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSMFAG00000036911	RBPMS	100	98.636	Macaca_fascicularis
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSMMUG00000000458	RBPMS	100	98.636	Macaca_mulatta
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSMNEG00000043805	RBPMS	100	98.636	Macaca_nemestrina
MGP_PahariEiJ_G0021439	Rbpms	91	99.495	ENSMLEG00000015635	RBPMS	100	99.495	Mandrillus_leucophaeus
MGP_PahariEiJ_G0021439	Rbpms	69	83.969	ENSMAMG00000004604	RBPMS	69	83.969	Mastacembelus_armatus
MGP_PahariEiJ_G0021439	Rbpms	99	83.590	ENSMZEG00005000698	RBPMS	97	81.818	Maylandia_zebra
MGP_PahariEiJ_G0021439	Rbpms	89	95.455	ENSMGAG00000005088	RBPMS	99	83.673	Meleagris_gallopavo
MGP_PahariEiJ_G0021439	Rbpms	100	99.545	ENSMAUG00000018892	Rbpms	100	99.545	Mesocricetus_auratus
MGP_PahariEiJ_G0021439	Rbpms	100	96.447	ENSMICG00000001295	RBPMS	100	96.447	Microcebus_murinus
MGP_PahariEiJ_G0021439	Rbpms	100	99.545	ENSMOCG00000014009	Rbpms	100	99.545	Microtus_ochrogaster
MGP_PahariEiJ_G0021439	Rbpms	82	85.714	ENSMMOG00000012036	RBPMS	72	77.457	Mola_mola
MGP_PahariEiJ_G0021439	Rbpms	96	93.158	ENSMODG00000019006	RBPMS	91	87.565	Monodelphis_domestica
MGP_PahariEiJ_G0021439	Rbpms	99	82.051	ENSMALG00000003261	RBPMS	99	77.949	Monopterus_albus
MGP_PahariEiJ_G0021439	Rbpms	100	99.545	MGP_CAROLIEiJ_G0030970	Rbpms	100	99.545	Mus_caroli
MGP_PahariEiJ_G0021439	Rbpms	100	99.545	ENSMUSG00000031586	Rbpms	100	99.545	Mus_musculus
MGP_PahariEiJ_G0021439	Rbpms	100	99.545	MGP_SPRETEiJ_G0032087	Rbpms	100	99.545	Mus_spretus
MGP_PahariEiJ_G0021439	Rbpms	93	97.561	ENSMPUG00000011314	RBPMS	93	97.561	Mustela_putorius_furo
MGP_PahariEiJ_G0021439	Rbpms	100	96.954	ENSMLUG00000009391	RBPMS	100	97.468	Myotis_lucifugus
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSNGAG00000011141	Rbpms	100	98.636	Nannospalax_galili
MGP_PahariEiJ_G0021439	Rbpms	89	86.364	ENSNBRG00000003313	RBPMS	97	81.818	Neolamprologus_brichardi
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSNLEG00000036183	-	100	98.182	Nomascus_leucogenys
MGP_PahariEiJ_G0021439	Rbpms	100	78.182	ENSOPRG00000013151	RBPMS	100	78.182	Ochotona_princeps
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSODEG00000006700	RBPMS	100	98.636	Octodon_degus
MGP_PahariEiJ_G0021439	Rbpms	89	86.364	ENSONIG00000007546	RBPMS	100	81.818	Oreochromis_niloticus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSOCUG00000008572	RBPMS	100	98.182	Oryctolagus_cuniculus
MGP_PahariEiJ_G0021439	Rbpms	100	82.234	ENSORLG00000004135	-	100	78.173	Oryzias_latipes
MGP_PahariEiJ_G0021439	Rbpms	100	82.741	ENSORLG00020016179	RBPMS	100	78.680	Oryzias_latipes_hni
MGP_PahariEiJ_G0021439	Rbpms	100	82.741	ENSORLG00015013770	RBPMS	100	78.680	Oryzias_latipes_hsok
MGP_PahariEiJ_G0021439	Rbpms	99	82.564	ENSOMEG00000005044	RBPMS	99	78.462	Oryzias_melastigma
MGP_PahariEiJ_G0021439	Rbpms	92	96.154	ENSOGAG00000030298	RBPMS	81	96.154	Otolemur_garnettii
MGP_PahariEiJ_G0021439	Rbpms	67	91.406	ENSOARG00000010366	RBPMS	94	88.722	Ovis_aries
MGP_PahariEiJ_G0021439	Rbpms	91	99.495	ENSPPAG00000033108	RBPMS	100	99.495	Pan_paniscus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSPPRG00000004836	RBPMS	100	98.182	Panthera_pardus
MGP_PahariEiJ_G0021439	Rbpms	91	99.495	ENSPTIG00000015964	RBPMS	90	99.495	Panthera_tigris_altaica
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSPTRG00000020135	RBPMS	100	98.636	Pan_troglodytes
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSPANG00000008143	RBPMS	100	98.636	Papio_anubis
MGP_PahariEiJ_G0021439	Rbpms	100	81.726	ENSPKIG00000000535	-	100	78.173	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0021439	Rbpms	96	80.000	ENSPKIG00000004836	rbpms	99	76.842	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0021439	Rbpms	89	94.286	ENSPSIG00000006136	RBPMS	99	89.143	Pelodiscus_sinensis
MGP_PahariEiJ_G0021439	Rbpms	81	86.875	ENSPMGG00000018012	RBPMS	91	70.936	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0021439	Rbpms	100	97.980	ENSPEMG00000021130	Rbpms	100	97.980	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021439	Rbpms	90	95.480	ENSPCIG00000019298	-	65	96.129	Phascolarctos_cinereus
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSPFOG00000017158	RBPMS	99	78.974	Poecilia_formosa
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSPLAG00000010767	RBPMS	99	78.974	Poecilia_latipinna
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSPMEG00000009788	RBPMS	99	78.974	Poecilia_mexicana
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSPREG00000016959	RBPMS	99	78.974	Poecilia_reticulata
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSPPYG00000018487	RBPMS	100	98.636	Pongo_abelii
MGP_PahariEiJ_G0021439	Rbpms	58	98.182	ENSPCAG00000013493	-	100	98.182	Procavia_capensis
MGP_PahariEiJ_G0021439	Rbpms	100	85.909	ENSPCOG00000015948	RBPMS	89	97.688	Propithecus_coquereli
MGP_PahariEiJ_G0021439	Rbpms	99	96.804	ENSPVAG00000001661	RBPMS	99	96.804	Pteropus_vampyrus
MGP_PahariEiJ_G0021439	Rbpms	99	83.590	ENSPNYG00000001172	RBPMS	97	81.818	Pundamilia_nyererei
MGP_PahariEiJ_G0021439	Rbpms	98	82.474	ENSPNAG00000029160	RBPMS	99	78.351	Pygocentrus_nattereri
MGP_PahariEiJ_G0021439	Rbpms	100	99.545	ENSRNOG00000013328	Rbpms	100	99.545	Rattus_norvegicus
MGP_PahariEiJ_G0021439	Rbpms	98	92.593	ENSRBIG00000038218	RBPMS	100	98.857	Rhinopithecus_bieti
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSRROG00000042518	RBPMS	100	98.636	Rhinopithecus_roxellana
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSSBOG00000026670	RBPMS	100	98.182	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021439	Rbpms	100	89.340	ENSSHAG00000010114	RBPMS	100	84.772	Sarcophilus_harrisii
MGP_PahariEiJ_G0021439	Rbpms	89	82.857	ENSSFOG00015017481	-	99	76.316	Scleropages_formosus
MGP_PahariEiJ_G0021439	Rbpms	99	82.564	ENSSFOG00015000417	rbpms	99	78.974	Scleropages_formosus
MGP_PahariEiJ_G0021439	Rbpms	100	83.756	ENSSMAG00000010871	rbpms	100	79.695	Scophthalmus_maximus
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSSDUG00000010894	RBPMS	99	78.974	Seriola_dumerili
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSSLDG00000012916	RBPMS	99	78.974	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0021439	Rbpms	100	94.545	ENSSARG00000000274	RBPMS	100	90.455	Sorex_araneus
MGP_PahariEiJ_G0021439	Rbpms	98	90.256	ENSSPUG00000017525	RBPMS	74	85.641	Sphenodon_punctatus
MGP_PahariEiJ_G0021439	Rbpms	81	77.273	ENSSPAG00000004777	rbpms	94	77.273	Stegastes_partitus
MGP_PahariEiJ_G0021439	Rbpms	100	98.182	ENSSSCG00000015846	RBPMS	100	98.182	Sus_scrofa
MGP_PahariEiJ_G0021439	Rbpms	97	92.147	ENSTGUG00000001776	RBPMS	100	87.435	Taeniopygia_guttata
MGP_PahariEiJ_G0021439	Rbpms	100	83.249	ENSTRUG00000000041	RBPMS	100	79.188	Takifugu_rubripes
MGP_PahariEiJ_G0021439	Rbpms	100	96.364	ENSTTRG00000012451	RBPMS	100	96.364	Tursiops_truncatus
MGP_PahariEiJ_G0021439	Rbpms	62	94.118	ENSUAMG00000026353	RBPMS	78	94.118	Ursus_americanus
MGP_PahariEiJ_G0021439	Rbpms	94	97.561	ENSUMAG00000007347	RBPMS	99	97.561	Ursus_maritimus
MGP_PahariEiJ_G0021439	Rbpms	91	99.495	ENSVPAG00000010991	RBPMS	100	99.495	Vicugna_pacos
MGP_PahariEiJ_G0021439	Rbpms	100	98.636	ENSVVUG00000019770	RBPMS	100	98.636	Vulpes_vulpes
MGP_PahariEiJ_G0021439	Rbpms	89	92.571	ENSXETG00000011290	rbpms	100	87.429	Xenopus_tropicalis
MGP_PahariEiJ_G0021439	Rbpms	100	74.619	ENSXCOG00000002436	RBPMS	99	70.558	Xiphophorus_couchianus
MGP_PahariEiJ_G0021439	Rbpms	99	83.077	ENSXMAG00000027637	RBPMS	99	78.974	Xiphophorus_maculatus