EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021563 (Gene tree)
Gene ID: 110336887
Gene Symbol: -
Alias: -
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 29755 bases
Position: chr19:81555021-81584775
Accession: 110336887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0047473	Gar1	PF04410.14	1.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0047473	-	2457	-	MGP_PahariEiJ_P0047473	487 (aa)	XP_021075287	UPI000A30DE2D

Gene Model

Click here to download MGP_PahariEiJ_G0021563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021563	-	100	69.080	ENSG00000145414	NAF1	95	90.000	Homo_sapiens
MGP_PahariEiJ_G0021563	-	100	68.400	ENSAMEG00000014688	NAF1	100	67.944	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021563	-	62	39.088	ENSATEG00000003514	-	57	40.729	Anabas_testudineus
MGP_PahariEiJ_G0021563	-	62	53.459	ENSAPLG00000003210	NAF1	83	56.997	Anas_platyrhynchos
MGP_PahariEiJ_G0021563	-	100	69.246	ENSANAG00000025253	NAF1	93	90.000	Aotus_nancymaae
MGP_PahariEiJ_G0021563	-	100	66.603	ENSCJAG00000012406	NAF1	95	87.500	Callithrix_jacchus
MGP_PahariEiJ_G0021563	-	60	78.041	ENSCAFG00000029679	NAF1	99	78.378	Canis_familiaris
MGP_PahariEiJ_G0021563	-	100	66.531	ENSCAFG00020005334	NAF1	100	68.357	Canis_lupus_dingo
MGP_PahariEiJ_G0021563	-	72	79.552	ENSTSYG00000005946	NAF1	88	92.105	Carlito_syrichta
MGP_PahariEiJ_G0021563	-	72	79.320	ENSCAPG00000017838	NAF1	94	79.603	Cavia_aperea
MGP_PahariEiJ_G0021563	-	100	66.929	ENSCPOG00000010331	NAF1	100	67.323	Cavia_porcellus
MGP_PahariEiJ_G0021563	-	100	69.565	ENSCCAG00000030023	NAF1	95	90.000	Cebus_capucinus
MGP_PahariEiJ_G0021563	-	100	69.185	ENSCATG00000022663	NAF1	95	90.000	Cercocebus_atys
MGP_PahariEiJ_G0021563	-	72	83.381	ENSCSAG00000003199	NAF1	100	68.885	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021563	-	57	82.014	ENSCHOG00000011393	NAF1	58	81.164	Choloepus_hoffmanni
MGP_PahariEiJ_G0021563	-	63	55.937	ENSCPBG00000003379	NAF1	72	55.963	Chrysemys_picta_bellii
MGP_PahariEiJ_G0021563	-	72	82.857	ENSCANG00000039151	NAF1	95	90.000	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021563	-	100	78.499	ENSCGRG00001018484	Naf1	100	78.499	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021563	-	72	83.429	ENSCGRG00000001742	Naf1	83	89.619	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0021563	-	60	45.902	ENSDARG00000057929	naf1	54	46.127	Danio_rerio
MGP_PahariEiJ_G0021563	-	95	69.565	ENSDNOG00000031106	NAF1	100	68.269	Dasypus_novemcinctus
MGP_PahariEiJ_G0021563	-	72	83.095	ENSDORG00000011327	Naf1	100	69.371	Dipodomys_ordii
MGP_PahariEiJ_G0021563	-	62	62.500	ENSETEG00000002872	-	84	50.976	Echinops_telfairi
MGP_PahariEiJ_G0021563	-	100	68.577	ENSEASG00005022201	NAF1	100	68.130	Equus_asinus_asinus
MGP_PahariEiJ_G0021563	-	100	68.775	ENSECAG00000016738	NAF1	100	68.321	Equus_caballus
MGP_PahariEiJ_G0021563	-	68	61.111	ENSEEUG00000008335	-	99	60.172	Erinaceus_europaeus
MGP_PahariEiJ_G0021563	-	100	68.200	ENSFCAG00000031652	NAF1	100	67.269	Felis_catus
MGP_PahariEiJ_G0021563	-	64	54.381	ENSFALG00000011110	NAF1	93	49.087	Ficedula_albicollis
MGP_PahariEiJ_G0021563	-	100	70.265	ENSFDAG00000007497	NAF1	100	70.468	Fukomys_damarensis
MGP_PahariEiJ_G0021563	-	51	47.012	ENSFHEG00000015835	-	58	42.908	Fundulus_heteroclitus
MGP_PahariEiJ_G0021563	-	63	55.172	ENSGALG00000009496	NAF1	73	55.215	Gallus_gallus
MGP_PahariEiJ_G0021563	-	100	69.667	ENSGGOG00000000894	NAF1	95	90.000	Gorilla_gorilla
MGP_PahariEiJ_G0021563	-	100	69.200	ENSHGLG00000014899	NAF1	100	70.259	Heterocephalus_glaber_female
MGP_PahariEiJ_G0021563	-	100	69.200	ENSHGLG00100007507	NAF1	100	70.259	Heterocephalus_glaber_male
MGP_PahariEiJ_G0021563	-	100	69.763	ENSSTOG00000023858	NAF1	100	70.356	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021563	-	72	75.429	ENSJJAG00000012147	-	94	75.714	Jaculus_jaculus
MGP_PahariEiJ_G0021563	-	51	45.565	ENSLBEG00000020414	-	54	46.311	Labrus_bergylta
MGP_PahariEiJ_G0021563	-	69	59.788	ENSLOCG00000007989	NAF1	66	51.698	Lepisosteus_oculatus
MGP_PahariEiJ_G0021563	-	70	64.706	ENSLAFG00000009193	-	100	65.407	Loxodonta_africana
MGP_PahariEiJ_G0021563	-	100	69.185	ENSMFAG00000040952	NAF1	95	90.000	Macaca_fascicularis
MGP_PahariEiJ_G0021563	-	100	68.986	ENSMMUG00000001717	NAF1	95	90.000	Macaca_mulatta
MGP_PahariEiJ_G0021563	-	100	69.185	ENSMNEG00000032677	NAF1	95	90.000	Macaca_nemestrina
MGP_PahariEiJ_G0021563	-	100	69.384	ENSMLEG00000035330	NAF1	95	90.000	Mandrillus_leucophaeus
MGP_PahariEiJ_G0021563	-	58	58.076	ENSMGAG00000002133	NAF1	90	58.076	Meleagris_gallopavo
MGP_PahariEiJ_G0021563	-	72	88.857	ENSMAUG00000013072	Naf1	100	74.233	Mesocricetus_auratus
MGP_PahariEiJ_G0021563	-	100	66.603	ENSMICG00000038661	NAF1	91	94.872	Microcebus_murinus
MGP_PahariEiJ_G0021563	-	100	76.578	ENSMOCG00000010360	Naf1	100	79.032	Microtus_ochrogaster
MGP_PahariEiJ_G0021563	-	50	52.227	ENSMODG00000028980	-	58	50.000	Monodelphis_domestica
MGP_PahariEiJ_G0021563	-	100	76.114	MGP_CAROLIEiJ_G0031097	Naf1	73	92.476	Mus_caroli
MGP_PahariEiJ_G0021563	-	84	91.283	ENSMUSG00000014907	Naf1	85	91.912	Mus_musculus
MGP_PahariEiJ_G0021563	-	88	82.005	MGP_SPRETEiJ_G0032213	-	94	83.257	Mus_spretus
MGP_PahariEiJ_G0021563	-	100	66.994	ENSMPUG00000001861	NAF1	100	67.400	Mustela_putorius_furo
MGP_PahariEiJ_G0021563	-	65	78.019	ENSMLUG00000004627	NAF1	100	66.537	Myotis_lucifugus
MGP_PahariEiJ_G0021563	-	100	73.494	ENSNGAG00000023833	Naf1	100	73.077	Nannospalax_galili
MGP_PahariEiJ_G0021563	-	78	69.652	ENSNLEG00000006459	-	95	90.000	Nomascus_leucogenys
MGP_PahariEiJ_G0021563	-	100	69.777	ENSODEG00000006528	NAF1	100	70.200	Octodon_degus
MGP_PahariEiJ_G0021563	-	53	72.031	ENSOANG00000014157	-	90	68.667	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0021563	-	100	67.530	ENSOCUG00000000485	NAF1	100	67.057	Oryctolagus_cuniculus
MGP_PahariEiJ_G0021563	-	71	78.571	ENSOARG00000013716	NAF1	100	67.611	Ovis_aries
MGP_PahariEiJ_G0021563	-	100	69.472	ENSPPAG00000034674	NAF1	95	90.000	Pan_paniscus
MGP_PahariEiJ_G0021563	-	100	67.400	ENSPPRG00000003688	NAF1	100	67.269	Panthera_pardus
MGP_PahariEiJ_G0021563	-	100	67.400	ENSPTIG00000017246	NAF1	100	67.269	Panthera_tigris_altaica
MGP_PahariEiJ_G0021563	-	100	69.472	ENSPTRG00000016560	NAF1	95	90.000	Pan_troglodytes
MGP_PahariEiJ_G0021563	-	72	83.095	ENSPANG00000015574	NAF1	95	90.000	Papio_anubis
MGP_PahariEiJ_G0021563	-	71	56.098	ENSPSIG00000006545	NAF1	81	56.604	Pelodiscus_sinensis
MGP_PahariEiJ_G0021563	-	82	83.042	ENSPEMG00000014321	Naf1	91	87.429	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021563	-	54	45.756	ENSPFOG00000010705	-	65	48.971	Poecilia_formosa
MGP_PahariEiJ_G0021563	-	60	81.849	ENSPPYG00000029771	-	99	81.849	Pongo_abelii
MGP_PahariEiJ_G0021563	-	100	65.415	ENSPVAG00000016222	NAF1	100	66.996	Pteropus_vampyrus
MGP_PahariEiJ_G0021563	-	100	80.328	ENSRNOG00000026403	Naf1	100	80.123	Rattus_norvegicus
MGP_PahariEiJ_G0021563	-	100	67.269	ENSRBIG00000030027	NAF1	95	90.000	Rhinopithecus_bieti
MGP_PahariEiJ_G0021563	-	100	69.679	ENSRROG00000040912	NAF1	95	90.000	Rhinopithecus_roxellana
MGP_PahariEiJ_G0021563	-	100	69.844	ENSSBOG00000002085	NAF1	95	90.000	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021563	-	51	62.302	ENSSPUG00000004087	NAF1	68	71.939	Sphenodon_punctatus
MGP_PahariEiJ_G0021563	-	64	82.595	ENSSSCG00000008887	NAF1	100	68.548	Sus_scrofa
MGP_PahariEiJ_G0021563	-	100	66.327	ENSTTRG00000010106	NAF1	78	79.714	Tursiops_truncatus
MGP_PahariEiJ_G0021563	-	100	68.254	ENSUAMG00000017043	NAF1	100	68.725	Ursus_americanus
MGP_PahariEiJ_G0021563	-	100	68.127	ENSUMAG00000019748	NAF1	100	68.526	Ursus_maritimus
MGP_PahariEiJ_G0021563	-	72	78.814	ENSVVUG00000022303	NAF1	96	79.096	Vulpes_vulpes