EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021685 (Gene tree)
Gene ID: 110336531
Gene Symbol: Cherp
Alias: 5730408I11Rik|D8Wsu96e|DAN16|SCAF6
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 14268 bases
Position: chr19:87166452-87180719
Accession: 110336531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0047873	Surp	PF01805.20	8.7e-16	1	1
MGP_PahariEiJ_P0047873	G-patch	PF01585.23	7.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0047873	-	3763	XM_021219135	MGP_PahariEiJ_P0047873	928 (aa)	XP_021074794	UPI000A30A2B9

Gene Model

Click here to download MGP_PahariEiJ_G0021685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021685	Cherp	99	94.863	ENSG00000085872	CHERP	99	94.426	Homo_sapiens
MGP_PahariEiJ_G0021685	Cherp	59	61.062	ENSAPOG00000009646	cherp	96	62.366	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0021685	Cherp	98	87.033	ENSAMEG00000010048	CHERP	80	91.245	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021685	Cherp	99	65.778	ENSAOCG00000017846	cherp	79	66.755	Amphiprion_ocellaris
MGP_PahariEiJ_G0021685	Cherp	99	64.568	ENSAPEG00000021128	cherp	79	66.223	Amphiprion_percula
MGP_PahariEiJ_G0021685	Cherp	99	65.203	ENSATEG00000006341	cherp	99	65.595	Anabas_testudineus
MGP_PahariEiJ_G0021685	Cherp	76	84.107	ENSAPLG00000010773	CHERP	98	83.669	Anas_platyrhynchos
MGP_PahariEiJ_G0021685	Cherp	99	93.737	ENSANAG00000024284	CHERP	99	93.305	Aotus_nancymaae
MGP_PahariEiJ_G0021685	Cherp	99	66.738	ENSACLG00000020053	cherp	79	66.755	Astatotilapia_calliptera
MGP_PahariEiJ_G0021685	Cherp	99	67.582	ENSAMXG00000021637	cherp	93	67.752	Astyanax_mexicanus
MGP_PahariEiJ_G0021685	Cherp	99	94.645	ENSBTAG00000005289	CHERP	99	94.098	Bos_taurus
MGP_PahariEiJ_G0021685	Cherp	99	93.629	ENSCJAG00000040462	CHERP	99	93.197	Callithrix_jacchus
MGP_PahariEiJ_G0021685	Cherp	99	95.082	ENSCAFG00000015671	CHERP	99	94.536	Canis_familiaris
MGP_PahariEiJ_G0021685	Cherp	99	93.844	ENSCAFG00020009941	CHERP	99	93.305	Canis_lupus_dingo
MGP_PahariEiJ_G0021685	Cherp	93	93.557	ENSCHIG00000013765	CHERP	95	96.739	Capra_hircus
MGP_PahariEiJ_G0021685	Cherp	91	89.357	ENSCAPG00000000910	CHERP	72	92.024	Cavia_aperea
MGP_PahariEiJ_G0021685	Cherp	100	93.469	ENSCPOG00000019949	CHERP	100	93.255	Cavia_porcellus
MGP_PahariEiJ_G0021685	Cherp	99	93.844	ENSCCAG00000031534	CHERP	99	93.413	Cebus_capucinus
MGP_PahariEiJ_G0021685	Cherp	99	93.737	ENSCATG00000031409	CHERP	99	93.737	Cercocebus_atys
MGP_PahariEiJ_G0021685	Cherp	93	91.753	ENSCLAG00000005484	CHERP	99	91.638	Chinchilla_lanigera
MGP_PahariEiJ_G0021685	Cherp	99	94.973	ENSCSAG00000005740	CHERP	99	94.536	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021685	Cherp	99	84.967	ENSCPBG00000014970	CHERP	99	84.205	Chrysemys_picta_bellii
MGP_PahariEiJ_G0021685	Cherp	68	57.770	ENSCING00000004814	-	54	71.277	Ciona_intestinalis
MGP_PahariEiJ_G0021685	Cherp	99	95.082	ENSCANG00000032053	CHERP	99	94.645	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021685	Cherp	100	96.709	ENSCGRG00001023316	Cherp	100	96.709	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021685	Cherp	99	98.046	ENSCGRG00000015901	Cherp	99	98.046	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0021685	Cherp	79	66.755	ENSCSEG00000019700	cherp	79	65.882	Cynoglossus_semilaevis
MGP_PahariEiJ_G0021685	Cherp	76	66.436	ENSCVAG00000003622	cherp	93	66.713	Cyprinodon_variegatus
MGP_PahariEiJ_G0021685	Cherp	99	67.459	ENSDARG00000021812	cherp	100	75.472	Danio_rerio
MGP_PahariEiJ_G0021685	Cherp	98	90.076	ENSDORG00000027623	Cherp	100	90.076	Dipodomys_ordii
MGP_PahariEiJ_G0021685	Cherp	63	63.235	FBgn0261872	scaf6	55	63.235	Drosophila_melanogaster
MGP_PahariEiJ_G0021685	Cherp	82	92.857	ENSETEG00000019543	CHERP	83	92.857	Echinops_telfairi
MGP_PahariEiJ_G0021685	Cherp	99	95.082	ENSEASG00005000428	CHERP	91	94.536	Equus_asinus_asinus
MGP_PahariEiJ_G0021685	Cherp	99	95.191	ENSECAG00000012713	CHERP	99	94.645	Equus_caballus
MGP_PahariEiJ_G0021685	Cherp	99	68.259	ENSELUG00000023026	cherp	80	68.127	Esox_lucius
MGP_PahariEiJ_G0021685	Cherp	99	93.528	ENSFCAG00000013172	CHERP	99	93.420	Felis_catus
MGP_PahariEiJ_G0021685	Cherp	79	84.553	ENSFALG00000013410	CHERP	86	83.660	Ficedula_albicollis
MGP_PahariEiJ_G0021685	Cherp	78	81.978	ENSFDAG00000015981	CHERP	81	79.603	Fukomys_damarensis
MGP_PahariEiJ_G0021685	Cherp	88	84.615	ENSFHEG00000009720	cherp	79	59.892	Fundulus_heteroclitus
MGP_PahariEiJ_G0021685	Cherp	78	65.462	ENSGMOG00000008654	cherp	79	66.845	Gadus_morhua
MGP_PahariEiJ_G0021685	Cherp	79	84.490	ENSGALG00000003824	CHERP	88	83.551	Gallus_gallus
MGP_PahariEiJ_G0021685	Cherp	98	62.354	ENSGACG00000002053	cherp	98	61.530	Gasterosteus_aculeatus
MGP_PahariEiJ_G0021685	Cherp	99	84.641	ENSGAGG00000014208	CHERP	99	83.987	Gopherus_agassizii
MGP_PahariEiJ_G0021685	Cherp	91	77.688	ENSGGOG00000016348	CHERP	99	81.977	Gorilla_gorilla
MGP_PahariEiJ_G0021685	Cherp	99	66.239	ENSHBUG00000007405	cherp	79	66.622	Haplochromis_burtoni
MGP_PahariEiJ_G0021685	Cherp	100	92.688	ENSHGLG00000002993	CHERP	100	93.011	Heterocephalus_glaber_female
MGP_PahariEiJ_G0021685	Cherp	59	79.814	ENSHGLG00100010390	CHERP	68	79.582	Heterocephalus_glaber_male
MGP_PahariEiJ_G0021685	Cherp	79	65.870	ENSHCOG00000007691	cherp	79	64.156	Hippocampus_comes
MGP_PahariEiJ_G0021685	Cherp	99	67.918	ENSIPUG00000025008	cherp	99	67.991	Ictalurus_punctatus
MGP_PahariEiJ_G0021685	Cherp	99	95.212	ENSSTOG00000012089	CHERP	100	94.995	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021685	Cherp	100	89.224	ENSJJAG00000017982	Cherp	81	94.687	Jaculus_jaculus
MGP_PahariEiJ_G0021685	Cherp	99	64.111	ENSKMAG00000009101	cherp	79	64.901	Kryptolebias_marmoratus
MGP_PahariEiJ_G0021685	Cherp	85	63.827	ENSLBEG00000007586	cherp	91	65.782	Labrus_bergylta
MGP_PahariEiJ_G0021685	Cherp	100	79.792	ENSLACG00000018221	CHERP	80	77.866	Latimeria_chalumnae
MGP_PahariEiJ_G0021685	Cherp	99	75.080	ENSLOCG00000003654	cherp	79	72.966	Lepisosteus_oculatus
MGP_PahariEiJ_G0021685	Cherp	99	92.140	ENSLAFG00000009096	CHERP	100	91.921	Loxodonta_africana
MGP_PahariEiJ_G0021685	Cherp	99	93.737	ENSMFAG00000033267	CHERP	99	93.305	Macaca_fascicularis
MGP_PahariEiJ_G0021685	Cherp	99	89.957	ENSMMUG00000012958	CHERP	82	92.781	Macaca_mulatta
MGP_PahariEiJ_G0021685	Cherp	99	93.737	ENSMNEG00000004125	CHERP	99	93.305	Macaca_nemestrina
MGP_PahariEiJ_G0021685	Cherp	92	97.598	ENSMLEG00000044337	CHERP	99	91.758	Mandrillus_leucophaeus
MGP_PahariEiJ_G0021685	Cherp	99	65.815	ENSMAMG00000022269	cherp	79	66.886	Mastacembelus_armatus
MGP_PahariEiJ_G0021685	Cherp	99	66.738	ENSMZEG00005018014	cherp	79	66.755	Maylandia_zebra
MGP_PahariEiJ_G0021685	Cherp	68	84.748	ENSMGAG00000005571	CHERP	97	82.084	Meleagris_gallopavo
MGP_PahariEiJ_G0021685	Cherp	100	96.489	ENSMAUG00000015856	Cherp	100	96.489	Mesocricetus_auratus
MGP_PahariEiJ_G0021685	Cherp	99	92.467	ENSMICG00000004577	CHERP	99	93.450	Microcebus_murinus
MGP_PahariEiJ_G0021685	Cherp	100	98.276	ENSMOCG00000014697	Cherp	100	98.276	Microtus_ochrogaster
MGP_PahariEiJ_G0021685	Cherp	98	66.202	ENSMMOG00000008525	cherp	81	66.756	Mola_mola
MGP_PahariEiJ_G0021685	Cherp	99	89.530	ENSMODG00000014938	CHERP	100	89.530	Monodelphis_domestica
MGP_PahariEiJ_G0021685	Cherp	99	65.919	ENSMALG00000020688	cherp	79	64.935	Monopterus_albus
MGP_PahariEiJ_G0021685	Cherp	100	98.824	MGP_CAROLIEiJ_G0031220	Cherp	100	98.824	Mus_caroli
MGP_PahariEiJ_G0021685	Cherp	100	98.507	ENSMUSG00000052488	Cherp	100	98.507	Mus_musculus
MGP_PahariEiJ_G0021685	Cherp	100	98.928	MGP_SPRETEiJ_G0032341	Cherp	100	98.928	Mus_spretus
MGP_PahariEiJ_G0021685	Cherp	79	94.945	ENSMPUG00000016023	CHERP	78	94.980	Mustela_putorius_furo
MGP_PahariEiJ_G0021685	Cherp	79	88.043	ENSMLUG00000013881	CHERP	99	87.269	Myotis_lucifugus
MGP_PahariEiJ_G0021685	Cherp	99	94.946	ENSNGAG00000023323	Cherp	99	92.688	Nannospalax_galili
MGP_PahariEiJ_G0021685	Cherp	79	65.786	ENSNBRG00000001914	cherp	81	65.831	Neolamprologus_brichardi
MGP_PahariEiJ_G0021685	Cherp	99	95.191	ENSNLEG00000005536	CHERP	99	94.754	Nomascus_leucogenys
MGP_PahariEiJ_G0021685	Cherp	89	92.579	ENSMEUG00000010840	CHERP	91	93.878	Notamacropus_eugenii
MGP_PahariEiJ_G0021685	Cherp	78	93.810	ENSODEG00000001528	CHERP	81	93.260	Octodon_degus
MGP_PahariEiJ_G0021685	Cherp	99	65.572	ENSONIG00000007686	cherp	79	65.789	Oreochromis_niloticus
MGP_PahariEiJ_G0021685	Cherp	99	63.646	ENSORLG00000000138	cherp	79	65.559	Oryzias_latipes
MGP_PahariEiJ_G0021685	Cherp	99	63.907	ENSORLG00020013142	cherp	86	73.294	Oryzias_latipes_hni
MGP_PahariEiJ_G0021685	Cherp	99	64.004	ENSORLG00015008911	cherp	79	65.691	Oryzias_latipes_hsok
MGP_PahariEiJ_G0021685	Cherp	99	64.013	ENSOMEG00000016947	cherp	99	63.023	Oryzias_melastigma
MGP_PahariEiJ_G0021685	Cherp	100	92.688	ENSOGAG00000005834	CHERP	100	92.258	Otolemur_garnettii
MGP_PahariEiJ_G0021685	Cherp	99	83.896	ENSOARG00000018876	CHERP	79	83.919	Ovis_aries
MGP_PahariEiJ_G0021685	Cherp	99	93.629	ENSPPAG00000029195	CHERP	99	93.629	Pan_paniscus
MGP_PahariEiJ_G0021685	Cherp	99	93.528	ENSPPRG00000003275	CHERP	99	93.420	Panthera_pardus
MGP_PahariEiJ_G0021685	Cherp	98	71.429	ENSPTIG00000019778	CHERP	99	67.535	Panthera_tigris_altaica
MGP_PahariEiJ_G0021685	Cherp	99	94.863	ENSPTRG00000010647	CHERP	99	94.863	Pan_troglodytes
MGP_PahariEiJ_G0021685	Cherp	99	93.737	ENSPANG00000011698	CHERP	99	93.305	Papio_anubis
MGP_PahariEiJ_G0021685	Cherp	77	65.800	ENSPKIG00000000423	cherp	81	64.623	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0021685	Cherp	98	84.079	ENSPSIG00000011974	CHERP	99	84.565	Pelodiscus_sinensis
MGP_PahariEiJ_G0021685	Cherp	99	62.393	ENSPMGG00000023606	cherp	88	89.024	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0021685	Cherp	100	96.406	ENSPEMG00000011238	Cherp	100	96.406	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021685	Cherp	99	89.677	ENSPCIG00000019615	CHERP	95	89.677	Phascolarctos_cinereus
MGP_PahariEiJ_G0021685	Cherp	99	65.131	ENSPFOG00000016899	cherp	99	64.681	Poecilia_formosa
MGP_PahariEiJ_G0021685	Cherp	85	64.074	ENSPMEG00000002214	cherp	76	66.395	Poecilia_mexicana
MGP_PahariEiJ_G0021685	Cherp	99	64.674	ENSPREG00000020774	cherp	99	64.637	Poecilia_reticulata
MGP_PahariEiJ_G0021685	Cherp	99	89.071	ENSPPYG00000009691	CHERP	99	88.852	Pongo_abelii
MGP_PahariEiJ_G0021685	Cherp	99	84.044	ENSPCAG00000001337	CHERP	90	95.652	Procavia_capensis
MGP_PahariEiJ_G0021685	Cherp	65	98.485	ENSPCOG00000022788	CHERP	99	98.485	Propithecus_coquereli
MGP_PahariEiJ_G0021685	Cherp	99	85.464	ENSPVAG00000004320	CHERP	90	97.826	Pteropus_vampyrus
MGP_PahariEiJ_G0021685	Cherp	99	66.418	ENSPNYG00000003942	cherp	79	66.223	Pundamilia_nyererei
MGP_PahariEiJ_G0021685	Cherp	99	66.911	ENSPNAG00000017179	cherp	99	66.597	Pygocentrus_nattereri
MGP_PahariEiJ_G0021685	Cherp	100	98.182	ENSRNOG00000012323	Cherp	100	98.182	Rattus_norvegicus
MGP_PahariEiJ_G0021685	Cherp	99	94.863	ENSRBIG00000038621	CHERP	99	94.426	Rhinopithecus_bieti
MGP_PahariEiJ_G0021685	Cherp	99	93.737	ENSRROG00000040770	CHERP	99	93.305	Rhinopithecus_roxellana
MGP_PahariEiJ_G0021685	Cherp	99	93.737	ENSSBOG00000014492	CHERP	99	93.737	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021685	Cherp	99	89.221	ENSSHAG00000010752	CHERP	99	89.480	Sarcophilus_harrisii
MGP_PahariEiJ_G0021685	Cherp	87	84.810	ENSSFOG00015008022	cherp	84	75.522	Scleropages_formosus
MGP_PahariEiJ_G0021685	Cherp	99	65.126	ENSSMAG00000005362	cherp	99	63.368	Scophthalmus_maximus
MGP_PahariEiJ_G0021685	Cherp	99	67.519	ENSSDUG00000019712	cherp	79	68.514	Seriola_dumerili
MGP_PahariEiJ_G0021685	Cherp	99	67.732	ENSSLDG00000012659	cherp	79	69.282	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0021685	Cherp	99	82.481	ENSSPUG00000008901	CHERP	99	83.243	Sphenodon_punctatus
MGP_PahariEiJ_G0021685	Cherp	99	67.556	ENSSPAG00000010681	cherp	79	67.463	Stegastes_partitus
MGP_PahariEiJ_G0021685	Cherp	99	95.301	ENSSSCG00000013860	CHERP	99	94.754	Sus_scrofa
MGP_PahariEiJ_G0021685	Cherp	99	85.808	ENSTGUG00000000680	CHERP	99	85.699	Taeniopygia_guttata
MGP_PahariEiJ_G0021685	Cherp	86	62.788	ENSTRUG00000007429	cherp	93	62.871	Takifugu_rubripes
MGP_PahariEiJ_G0021685	Cherp	99	63.490	ENSTNIG00000003363	cherp	80	63.389	Tetraodon_nigroviridis
MGP_PahariEiJ_G0021685	Cherp	88	93.913	ENSTTRG00000015006	CHERP	89	93.768	Tursiops_truncatus
MGP_PahariEiJ_G0021685	Cherp	99	87.895	ENSUAMG00000017295	CHERP	80	93.277	Ursus_americanus
MGP_PahariEiJ_G0021685	Cherp	67	86.039	ENSUMAG00000000965	CHERP	70	83.333	Ursus_maritimus
MGP_PahariEiJ_G0021685	Cherp	99	92.903	ENSVVUG00000016546	CHERP	99	92.796	Vulpes_vulpes
MGP_PahariEiJ_G0021685	Cherp	55	83.821	ENSXETG00000002072	cherp	97	79.847	Xenopus_tropicalis