EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021920 (Gene tree)
Gene ID: 110315923
Gene Symbol: Rbm28
Alias: 2810480G15Rik
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 41617 bases
Position: chr2:48611589-48653205
Accession: 110315923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0049017	RRM_1	PF00076.22	4.4e-55	1	4
MGP_PahariEiJ_P0049017	RRM_1	PF00076.22	4.4e-55	2	4
MGP_PahariEiJ_P0049017	RRM_1	PF00076.22	4.4e-55	3	4
MGP_PahariEiJ_P0049017	RRM_1	PF00076.22	4.4e-55	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0049022	-	497	-	-	- (aa)	-	-
MGP_PahariEiJ_T0049020	-	965	-	-	- (aa)	-	-
MGP_PahariEiJ_T0049021	-	767	-	-	- (aa)	-	-
MGP_PahariEiJ_T0049017	-	4442	XM_021189903	MGP_PahariEiJ_P0049017	753 (aa)	XP_021045562	UPI000A3082CE
MGP_PahariEiJ_T0049019	-	641	-	MGP_PahariEiJ_P0049019	133 (aa)	-	-
MGP_PahariEiJ_T0049018	-	1926	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0021920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021920	Rbm28	100	80.971	ENSG00000106344	RBM28	100	97.500	Homo_sapiens
MGP_PahariEiJ_G0021920	Rbm28	57	56.009	ENSAPOG00000015512	rbm28	100	51.995	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0021920	Rbm28	100	83.654	ENSAMEG00000004776	RBM28	92	90.625	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021920	Rbm28	56	55.687	ENSACIG00000023153	rbm28	100	52.083	Amphilophus_citrinellus
MGP_PahariEiJ_G0021920	Rbm28	57	55.708	ENSAOCG00000000462	rbm28	100	51.866	Amphiprion_ocellaris
MGP_PahariEiJ_G0021920	Rbm28	57	55.479	ENSAPEG00000012996	rbm28	100	51.886	Amphiprion_percula
MGP_PahariEiJ_G0021920	Rbm28	58	50.947	ENSATEG00000001672	rbm28	100	48.611	Anabas_testudineus
MGP_PahariEiJ_G0021920	Rbm28	100	82.143	ENSANAG00000033922	RBM28	100	81.878	Aotus_nancymaae
MGP_PahariEiJ_G0021920	Rbm28	100	49.558	ENSACLG00000025024	rbm28	100	50.320	Astatotilapia_calliptera
MGP_PahariEiJ_G0021920	Rbm28	58	55.705	ENSAMXG00000000763	rbm28	99	58.447	Astyanax_mexicanus
MGP_PahariEiJ_G0021920	Rbm28	100	79.708	ENSBTAG00000017001	RBM28	100	97.500	Bos_taurus
MGP_PahariEiJ_G0021920	Rbm28	100	79.948	ENSCJAG00000017731	RBM28	100	80.079	Callithrix_jacchus
MGP_PahariEiJ_G0021920	Rbm28	100	81.034	ENSCAFG00000001667	RBM28	100	80.902	Canis_familiaris
MGP_PahariEiJ_G0021920	Rbm28	100	81.034	ENSCAFG00020021648	RBM28	100	80.902	Canis_lupus_dingo
MGP_PahariEiJ_G0021920	Rbm28	100	79.841	ENSCHIG00000014146	RBM28	100	79.841	Capra_hircus
MGP_PahariEiJ_G0021920	Rbm28	100	80.236	ENSTSYG00000002892	RBM28	100	92.500	Carlito_syrichta
MGP_PahariEiJ_G0021920	Rbm28	83	61.526	ENSCAPG00000013218	RBM28	100	62.162	Cavia_aperea
MGP_PahariEiJ_G0021920	Rbm28	100	82.213	ENSCPOG00000006253	RBM28	100	82.082	Cavia_porcellus
MGP_PahariEiJ_G0021920	Rbm28	100	78.934	ENSCCAG00000035105	RBM28	100	80.658	Cebus_capucinus
MGP_PahariEiJ_G0021920	Rbm28	100	80.210	ENSCATG00000040497	RBM28	100	95.000	Cercocebus_atys
MGP_PahariEiJ_G0021920	Rbm28	100	79.576	ENSCLAG00000003707	RBM28	100	78.780	Chinchilla_lanigera
MGP_PahariEiJ_G0021920	Rbm28	100	80.658	ENSCSAG00000010161	RBM28	100	80.921	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021920	Rbm28	57	87.903	ENSCHOG00000001994	-	63	87.903	Choloepus_hoffmanni
MGP_PahariEiJ_G0021920	Rbm28	51	61.187	ENSCPBG00000018088	RBM28	87	59.227	Chrysemys_picta_bellii
MGP_PahariEiJ_G0021920	Rbm28	90	80.228	ENSCANG00000038397	RBM28	100	97.500	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021920	Rbm28	67	89.901	ENSCGRG00001021278	Rbm28	100	84.910	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021920	Rbm28	100	87.025	ENSCGRG00000005098	Rbm28	100	87.025	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0021920	Rbm28	100	50.000	ENSCSEG00000004212	rbm28	100	49.935	Cynoglossus_semilaevis
MGP_PahariEiJ_G0021920	Rbm28	59	55.876	ENSCVAG00000010493	rbm28	99	50.255	Cyprinodon_variegatus
MGP_PahariEiJ_G0021920	Rbm28	88	57.271	ENSDARG00000025332	rbm28	100	48.372	Danio_rerio
MGP_PahariEiJ_G0021920	Rbm28	100	79.447	ENSDNOG00000001124	RBM28	100	79.315	Dasypus_novemcinctus
MGP_PahariEiJ_G0021920	Rbm28	65	82.495	ENSDORG00000004184	Rbm28	97	82.696	Dipodomys_ordii
MGP_PahariEiJ_G0021920	Rbm28	66	39.759	FBgn0260456	CG4806	68	39.364	Drosophila_melanogaster
MGP_PahariEiJ_G0021920	Rbm28	100	69.921	ENSETEG00000007130	RBM28	99	70.317	Echinops_telfairi
MGP_PahariEiJ_G0021920	Rbm28	99	39.630	ENSEBUG00000004419	rbm28	98	40.587	Eptatretus_burgeri
MGP_PahariEiJ_G0021920	Rbm28	100	80.364	ENSEASG00005008528	RBM28	100	80.234	Equus_asinus_asinus
MGP_PahariEiJ_G0021920	Rbm28	100	80.260	ENSECAG00000007745	RBM28	100	80.260	Equus_caballus
MGP_PahariEiJ_G0021920	Rbm28	100	73.117	ENSEEUG00000002389	RBM28	100	72.987	Erinaceus_europaeus
MGP_PahariEiJ_G0021920	Rbm28	100	50.875	ENSELUG00000020602	rbm28	100	51.641	Esox_lucius
MGP_PahariEiJ_G0021920	Rbm28	100	80.397	ENSFCAG00000000946	RBM28	100	97.500	Felis_catus
MGP_PahariEiJ_G0021920	Rbm28	100	82.914	ENSFDAG00000010169	RBM28	100	82.517	Fukomys_damarensis
MGP_PahariEiJ_G0021920	Rbm28	58	52.370	ENSGMOG00000007091	rbm28	99	47.569	Gadus_morhua
MGP_PahariEiJ_G0021920	Rbm28	58	56.054	ENSGAFG00000004802	rbm28	97	55.928	Gambusia_affinis
MGP_PahariEiJ_G0021920	Rbm28	58	56.221	ENSGACG00000012612	rbm28	99	47.798	Gasterosteus_aculeatus
MGP_PahariEiJ_G0021920	Rbm28	100	51.651	ENSGAGG00000008873	RBM28	80	78.571	Gopherus_agassizii
MGP_PahariEiJ_G0021920	Rbm28	95	79.501	ENSGGOG00000004644	RBM28	97	79.778	Gorilla_gorilla
MGP_PahariEiJ_G0021920	Rbm28	90	50.840	ENSHBUG00000009611	rbm28	98	50.962	Haplochromis_burtoni
MGP_PahariEiJ_G0021920	Rbm28	100	82.228	ENSHGLG00000005409	RBM28	100	82.361	Heterocephalus_glaber_female
MGP_PahariEiJ_G0021920	Rbm28	100	82.228	ENSHGLG00100016458	RBM28	100	82.361	Heterocephalus_glaber_male
MGP_PahariEiJ_G0021920	Rbm28	83	47.396	ENSHCOG00000010597	rbm28	98	47.120	Hippocampus_comes
MGP_PahariEiJ_G0021920	Rbm28	56	48.341	ENSIPUG00000007103	rbm28	94	46.091	Ictalurus_punctatus
MGP_PahariEiJ_G0021920	Rbm28	100	82.399	ENSSTOG00000002169	RBM28	100	82.575	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021920	Rbm28	100	75.457	ENSJJAG00000022400	Rbm28	100	75.690	Jaculus_jaculus
MGP_PahariEiJ_G0021920	Rbm28	59	54.222	ENSKMAG00000013348	rbm28	99	50.129	Kryptolebias_marmoratus
MGP_PahariEiJ_G0021920	Rbm28	59	55.921	ENSLBEG00000012998	rbm28	100	49.937	Labrus_bergylta
MGP_PahariEiJ_G0021920	Rbm28	74	56.483	ENSLACG00000010485	-	100	55.888	Latimeria_chalumnae
MGP_PahariEiJ_G0021920	Rbm28	91	63.590	ENSLOCG00000015541	rbm28	81	62.887	Lepisosteus_oculatus
MGP_PahariEiJ_G0021920	Rbm28	100	79.657	ENSLAFG00000010717	RBM28	100	79.657	Loxodonta_africana
MGP_PahariEiJ_G0021920	Rbm28	100	80.603	ENSMFAG00000031036	RBM28	100	95.000	Macaca_fascicularis
MGP_PahariEiJ_G0021920	Rbm28	100	80.628	ENSMMUG00000007250	RBM28	100	95.000	Macaca_mulatta
MGP_PahariEiJ_G0021920	Rbm28	100	80.208	ENSMNEG00000036970	RBM28	100	95.000	Macaca_nemestrina
MGP_PahariEiJ_G0021920	Rbm28	84	79.362	ENSMLEG00000037717	RBM28	100	79.362	Mandrillus_leucophaeus
MGP_PahariEiJ_G0021920	Rbm28	100	51.733	ENSMAMG00000008525	rbm28	100	51.480	Mastacembelus_armatus
MGP_PahariEiJ_G0021920	Rbm28	93	48.916	ENSMZEG00005019625	rbm28	100	49.588	Maylandia_zebra
MGP_PahariEiJ_G0021920	Rbm28	100	83.162	ENSMAUG00000002263	Rbm28	100	83.033	Mesocricetus_auratus
MGP_PahariEiJ_G0021920	Rbm28	93	78.285	ENSMICG00000000107	RBM28	100	77.732	Microcebus_murinus
MGP_PahariEiJ_G0021920	Rbm28	100	87.533	ENSMOCG00000014615	Rbm28	100	87.401	Microtus_ochrogaster
MGP_PahariEiJ_G0021920	Rbm28	59	53.047	ENSMMOG00000008600	rbm28	100	51.235	Mola_mola
MGP_PahariEiJ_G0021920	Rbm28	100	69.351	ENSMODG00000015151	RBM28	100	70.964	Monodelphis_domestica
MGP_PahariEiJ_G0021920	Rbm28	58	54.176	ENSMALG00000006419	rbm28	100	48.354	Monopterus_albus
MGP_PahariEiJ_G0021920	Rbm28	100	94.688	MGP_CAROLIEiJ_G0028162	Rbm28	100	94.688	Mus_caroli
MGP_PahariEiJ_G0021920	Rbm28	100	96.282	ENSMUSG00000029701	Rbm28	100	96.282	Mus_musculus
MGP_PahariEiJ_G0021920	Rbm28	100	96.282	MGP_SPRETEiJ_G0029162	Rbm28	100	96.282	Mus_spretus
MGP_PahariEiJ_G0021920	Rbm28	100	80.000	ENSMPUG00000006511	RBM28	100	80.000	Mustela_putorius_furo
MGP_PahariEiJ_G0021920	Rbm28	100	79.843	ENSMLUG00000002186	RBM28	100	80.079	Myotis_lucifugus
MGP_PahariEiJ_G0021920	Rbm28	100	82.891	ENSNGAG00000006480	-	100	82.891	Nannospalax_galili
MGP_PahariEiJ_G0021920	Rbm28	100	79.630	ENSNGAG00000017946	-	100	79.630	Nannospalax_galili
MGP_PahariEiJ_G0021920	Rbm28	100	80.287	ENSNLEG00000012307	RBM28	100	97.500	Nomascus_leucogenys
MGP_PahariEiJ_G0021920	Rbm28	81	81.481	ENSMEUG00000009611	RBM28	91	81.481	Notamacropus_eugenii
MGP_PahariEiJ_G0021920	Rbm28	90	73.321	ENSOPRG00000015140	RBM28	90	75.145	Ochotona_princeps
MGP_PahariEiJ_G0021920	Rbm28	100	78.117	ENSODEG00000003213	-	100	78.117	Octodon_degus
MGP_PahariEiJ_G0021920	Rbm28	80	82.394	ENSODEG00000013217	-	87	82.394	Octodon_degus
MGP_PahariEiJ_G0021920	Rbm28	58	54.545	ENSONIG00000014924	rbm28	100	50.963	Oreochromis_niloticus
MGP_PahariEiJ_G0021920	Rbm28	100	63.351	ENSOANG00000000815	-	100	64.230	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0021920	Rbm28	100	78.385	ENSOCUG00000003009	RBM28	100	78.516	Oryctolagus_cuniculus
MGP_PahariEiJ_G0021920	Rbm28	99	50.758	ENSORLG00000009636	rbm28	99	51.958	Oryzias_latipes
MGP_PahariEiJ_G0021920	Rbm28	58	54.831	ENSORLG00020002123	rbm28	99	52.100	Oryzias_latipes_hni
MGP_PahariEiJ_G0021920	Rbm28	88	61.244	ENSORLG00015015030	rbm28	98	59.903	Oryzias_latipes_hsok
MGP_PahariEiJ_G0021920	Rbm28	58	56.858	ENSOMEG00000007801	rbm28	100	52.542	Oryzias_melastigma
MGP_PahariEiJ_G0021920	Rbm28	94	90.000	ENSOGAG00000006011	RBM28	100	90.000	Otolemur_garnettii
MGP_PahariEiJ_G0021920	Rbm28	100	79.128	ENSOARG00000002547	RBM28	100	79.128	Ovis_aries
MGP_PahariEiJ_G0021920	Rbm28	100	80.497	ENSPPAG00000041730	RBM28	100	97.500	Pan_paniscus
MGP_PahariEiJ_G0021920	Rbm28	100	79.868	ENSPPRG00000004420	RBM28	100	97.500	Panthera_pardus
MGP_PahariEiJ_G0021920	Rbm28	100	80.397	ENSPTIG00000008550	RBM28	100	97.500	Panthera_tigris_altaica
MGP_PahariEiJ_G0021920	Rbm28	100	80.759	ENSPTRG00000019659	RBM28	100	97.500	Pan_troglodytes
MGP_PahariEiJ_G0021920	Rbm28	100	80.366	ENSPANG00000022295	RBM28	100	95.000	Papio_anubis
MGP_PahariEiJ_G0021920	Rbm28	99	51.746	ENSPKIG00000023453	rbm28	99	51.625	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0021920	Rbm28	100	47.354	ENSPMGG00000012840	rbm28	100	48.545	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0021920	Rbm28	100	85.259	ENSPEMG00000020673	Rbm28	100	85.259	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021920	Rbm28	100	69.170	ENSPCIG00000012810	RBM28	100	71.129	Phascolarctos_cinereus
MGP_PahariEiJ_G0021920	Rbm28	59	56.858	ENSPFOG00000018209	rbm28	100	51.948	Poecilia_formosa
MGP_PahariEiJ_G0021920	Rbm28	58	56.306	ENSPLAG00000016078	rbm28	96	51.765	Poecilia_latipinna
MGP_PahariEiJ_G0021920	Rbm28	59	56.733	ENSPMEG00000004292	rbm28	100	51.299	Poecilia_mexicana
MGP_PahariEiJ_G0021920	Rbm28	57	55.530	ENSPREG00000014287	rbm28	98	50.132	Poecilia_reticulata
MGP_PahariEiJ_G0021920	Rbm28	100	81.053	ENSPPYG00000017975	RBM28	100	81.184	Pongo_abelii
MGP_PahariEiJ_G0021920	Rbm28	74	74.930	ENSPCAG00000008223	RBM28	83	75.069	Procavia_capensis
MGP_PahariEiJ_G0021920	Rbm28	100	79.870	ENSPCOG00000016797	RBM28	100	97.500	Propithecus_coquereli
MGP_PahariEiJ_G0021920	Rbm28	77	90.233	ENSPVAG00000005443	RBM28	77	90.233	Pteropus_vampyrus
MGP_PahariEiJ_G0021920	Rbm28	100	49.494	ENSPNYG00000014003	rbm28	100	49.805	Pundamilia_nyererei
MGP_PahariEiJ_G0021920	Rbm28	100	89.669	ENSRNOG00000005468	Rbm28	100	89.139	Rattus_norvegicus
MGP_PahariEiJ_G0021920	Rbm28	100	80.392	ENSRBIG00000033990	RBM28	100	97.500	Rhinopithecus_bieti
MGP_PahariEiJ_G0021920	Rbm28	100	80.105	ENSRROG00000040747	RBM28	100	97.500	Rhinopithecus_roxellana
MGP_PahariEiJ_G0021920	Rbm28	91	74.674	ENSSBOG00000012308	RBM28	100	74.674	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021920	Rbm28	96	66.437	ENSSHAG00000017017	RBM28	99	65.569	Sarcophilus_harrisii
MGP_PahariEiJ_G0021920	Rbm28	98	53.226	ENSSFOG00015001231	rbm28	100	53.272	Scleropages_formosus
MGP_PahariEiJ_G0021920	Rbm28	58	56.264	ENSSLDG00000020099	rbm28	100	50.765	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0021920	Rbm28	76	83.929	ENSSARG00000008303	RBM28	80	83.889	Sorex_araneus
MGP_PahariEiJ_G0021920	Rbm28	67	70.588	ENSSPUG00000000838	RBM28	80	70.588	Sphenodon_punctatus
MGP_PahariEiJ_G0021920	Rbm28	58	52.759	ENSSPAG00000023305	rbm28	100	50.000	Stegastes_partitus
MGP_PahariEiJ_G0021920	Rbm28	100	79.947	ENSSSCG00000031847	RBM28	100	80.475	Sus_scrofa
MGP_PahariEiJ_G0021920	Rbm28	59	53.763	ENSTRUG00000013311	rbm28	99	49.365	Takifugu_rubripes
MGP_PahariEiJ_G0021920	Rbm28	99	50.712	ENSTNIG00000017962	rbm28	99	49.805	Tetraodon_nigroviridis
MGP_PahariEiJ_G0021920	Rbm28	86	86.012	ENSTBEG00000012749	RBM28	86	86.012	Tupaia_belangeri
MGP_PahariEiJ_G0021920	Rbm28	100	76.933	ENSTTRG00000013647	RBM28	100	76.671	Tursiops_truncatus
MGP_PahariEiJ_G0021920	Rbm28	100	73.553	ENSUAMG00000006949	RBM28	100	74.113	Ursus_americanus
MGP_PahariEiJ_G0021920	Rbm28	100	80.317	ENSUMAG00000005997	RBM28	100	80.449	Ursus_maritimus
MGP_PahariEiJ_G0021920	Rbm28	88	72.424	ENSVPAG00000008304	RBM28	87	72.121	Vicugna_pacos
MGP_PahariEiJ_G0021920	Rbm28	100	80.769	ENSVVUG00000007270	RBM28	100	80.637	Vulpes_vulpes
MGP_PahariEiJ_G0021920	Rbm28	99	54.789	ENSXETG00000009271	rbm28	99	54.662	Xenopus_tropicalis
MGP_PahariEiJ_G0021920	Rbm28	58	53.741	ENSXCOG00000020357	rbm28	99	51.540	Xiphophorus_couchianus
MGP_PahariEiJ_G0021920	Rbm28	57	56.193	ENSXMAG00000004415	rbm28	100	50.452	Xiphophorus_maculatus