EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0021941 (Gene tree)
Gene ID
110316760
Gene Symbol
Zc3hc1
Alias
1110054L24Rik|HSPC216|Nipa
Full Name
zinc finger C3HC-type containing 1
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Minus strand
Length
25161 bases
Position
chr2:49907231-49932391
Accession
110316760
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0049159zf-C3HCPF07967.131.7e-2211
MGP_PahariEiJ_P0049156zf-C3HCPF07967.135.5e-2211
MGP_PahariEiJ_P0049158zf-C3HCPF07967.131.1e-2111
MGP_PahariEiJ_P0049155zf-C3HCPF07967.131.2e-2111
MGP_PahariEiJ_P0049158Rsm1PF08600.101.6e-1511
MGP_PahariEiJ_P0049155Rsm1PF08600.101.8e-1511
MGP_PahariEiJ_P0049159Rsm1PF08600.105.6e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0049155-1772-MGP_PahariEiJ_P0049155473 (aa)XP_021046852UPI000A30FD8E
MGP_PahariEiJ_T0049156-1621-MGP_PahariEiJ_P0049156431 (aa)--
MGP_PahariEiJ_T0049157-896--- (aa)--
MGP_PahariEiJ_T0049158-1813-MGP_PahariEiJ_P0049158453 (aa)--
MGP_PahariEiJ_T0049159-1450-MGP_PahariEiJ_P0049159402 (aa)--
MGP_PahariEiJ_T0049161-703-MGP_PahariEiJ_P004916148 (aa)--
MGP_PahariEiJ_T0049160-447--- (aa)--
MGP_PahariEiJ_T0049162-363--- (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0021941's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021941's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0021941Zc3hc19980.263ENSG00000091732ZC3HC19980.263Homo_sapiens
MGP_PahariEiJ_G0021941Zc3hc19341.493ENSAPOG00000009078zc3hc19540.202Acanthochromis_polyacanthus
MGP_PahariEiJ_G0021941Zc3hc110078.968ENSAMEG00000005425ZC3HC110078.968Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021941Zc3hc19340.854ENSACIG00000019513zc3hc19538.833Amphilophus_citrinellus
MGP_PahariEiJ_G0021941Zc3hc19440.927ENSAOCG00000024310zc3hc19541.010Amphiprion_ocellaris
MGP_PahariEiJ_G0021941Zc3hc19440.726ENSAPEG00000004907zc3hc19541.010Amphiprion_percula
MGP_PahariEiJ_G0021941Zc3hc18343.192ENSATEG00000016898zc3hc18543.224Anabas_testudineus
MGP_PahariEiJ_G0021941Zc3hc18754.831ENSAPLG00000003832ZC3HC19954.831Anas_platyrhynchos
MGP_PahariEiJ_G0021941Zc3hc19455.670ENSACAG00000001638ZC3HC19555.670Anolis_carolinensis
MGP_PahariEiJ_G0021941Zc3hc110078.131ENSANAG00000022213ZC3HC19984.878Aotus_nancymaae
MGP_PahariEiJ_G0021941Zc3hc18540.222ENSACLG00000025033zc3hc19440.000Astatotilapia_calliptera
MGP_PahariEiJ_G0021941Zc3hc19440.000ENSAMXG00000036792zc3hc19739.293Astyanax_mexicanus
MGP_PahariEiJ_G0021941Zc3hc110078.088ENSBTAG00000011247ZC3HC110078.088Bos_taurus
MGP_PahariEiJ_G0021941Zc3hc110078.685ENSCJAG00000010536ZC3HC19984.878Callithrix_jacchus
MGP_PahariEiJ_G0021941Zc3hc110080.198ENSCAFG00000001499-9980.198Canis_familiaris
MGP_PahariEiJ_G0021941Zc3hc110081.076ENSCAFG00000031850-10081.076Canis_familiaris
MGP_PahariEiJ_G0021941Zc3hc110080.876ENSCAFG00000028735-10080.876Canis_familiaris
MGP_PahariEiJ_G0021941Zc3hc110080.876ENSCAFG00000029401-9980.876Canis_familiaris
MGP_PahariEiJ_G0021941Zc3hc110081.076ENSCAFG00020006829-10081.076Canis_lupus_dingo
MGP_PahariEiJ_G0021941Zc3hc110079.167ENSCAFG00020023333-10079.167Canis_lupus_dingo
MGP_PahariEiJ_G0021941Zc3hc110075.904ENSCHIG00000014103ZC3HC110075.904Capra_hircus
MGP_PahariEiJ_G0021941Zc3hc110076.494ENSTSYG00000002843ZC3HC110076.494Carlito_syrichta
MGP_PahariEiJ_G0021941Zc3hc18865.789ENSCAPG00000016300ZC3HC110062.269Cavia_aperea
MGP_PahariEiJ_G0021941Zc3hc110075.299ENSCPOG00000014034ZC3HC110074.710Cavia_porcellus
MGP_PahariEiJ_G0021941Zc3hc110066.112ENSCCAG00000020384ZC3HC19985.398Cebus_capucinus
MGP_PahariEiJ_G0021941Zc3hc110080.478ENSCATG00000023130ZC3HC110080.478Cercocebus_atys
MGP_PahariEiJ_G0021941Zc3hc110070.175ENSCLAG00000008260ZC3HC110062.132Chinchilla_lanigera
MGP_PahariEiJ_G0021941Zc3hc17184.570ENSCSAG00000009881ZC3HC18984.570Chlorocebus_sabaeus
MGP_PahariEiJ_G0021941Zc3hc18978.444ENSCHOG00000011846ZC3HC19978.444Choloepus_hoffmanni
MGP_PahariEiJ_G0021941Zc3hc19660.494ENSCPBG00000017519ZC3HC19760.494Chrysemys_picta_bellii
MGP_PahariEiJ_G0021941Zc3hc110080.279ENSCANG00000029091ZC3HC19985.366Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021941Zc3hc110083.433ENSCGRG00001018805Zc3hc110083.433Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021941Zc3hc110082.236ENSCGRG00000017114Zc3hc110082.236Cricetulus_griseus_crigri
MGP_PahariEiJ_G0021941Zc3hc19538.264ENSCSEG00000009284zc3hc19438.067Cynoglossus_semilaevis
MGP_PahariEiJ_G0021941Zc3hc19241.159ENSCVAG00000011566zc3hc19439.511Cyprinodon_variegatus
MGP_PahariEiJ_G0021941Zc3hc19543.238ENSDARG00000062651zc3hc19543.238Danio_rerio
MGP_PahariEiJ_G0021941Zc3hc110077.490ENSDNOG00000045016ZC3HC110077.490Dasypus_novemcinctus
MGP_PahariEiJ_G0021941Zc3hc110069.323ENSDORG00000008697Zc3hc110069.323Dipodomys_ordii
MGP_PahariEiJ_G0021941Zc3hc18979.204ENSEASG00005008789ZC3HC19779.204Equus_asinus_asinus
MGP_PahariEiJ_G0021941Zc3hc110078.529ENSECAG00000017886ZC3HC110078.529Equus_caballus
MGP_PahariEiJ_G0021941Zc3hc19177.160ENSEEUG00000003123ZC3HC18477.160Erinaceus_europaeus
MGP_PahariEiJ_G0021941Zc3hc19640.117ENSELUG00000023168zc3hc19740.588Esox_lucius
MGP_PahariEiJ_G0021941Zc3hc110079.283ENSFCAG00000010429ZC3HC110079.283Felis_catus
MGP_PahariEiJ_G0021941Zc3hc19052.778ENSFALG00000005006ZC3HC110052.778Ficedula_albicollis
MGP_PahariEiJ_G0021941Zc3hc110075.498ENSFDAG00000019897ZC3HC110075.498Fukomys_damarensis
MGP_PahariEiJ_G0021941Zc3hc19342.697ENSFHEG00000020149zc3hc19938.911Fundulus_heteroclitus
MGP_PahariEiJ_G0021941Zc3hc19338.612ENSGMOG00000002914zc3hc19539.050Gadus_morhua
MGP_PahariEiJ_G0021941Zc3hc19854.767ENSGALG00000008003ZC3HC19954.767Gallus_gallus
MGP_PahariEiJ_G0021941Zc3hc19541.867ENSGAFG00000016095zc3hc19640.400Gambusia_affinis
MGP_PahariEiJ_G0021941Zc3hc19341.031ENSGACG00000019706zc3hc19441.068Gasterosteus_aculeatus
MGP_PahariEiJ_G0021941Zc3hc17659.645ENSGAGG00000016106ZC3HC110059.645Gopherus_agassizii
MGP_PahariEiJ_G0021941Zc3hc19979.760ENSGGOG00000015504ZC3HC19785.644Gorilla_gorilla
MGP_PahariEiJ_G0021941Zc3hc19241.033ENSHBUG00000008347zc3hc19439.264Haplochromis_burtoni
MGP_PahariEiJ_G0021941Zc3hc110076.693ENSHGLG00000005085ZC3HC110076.693Heterocephalus_glaber_female
MGP_PahariEiJ_G0021941Zc3hc110076.494ENSHGLG00100011395ZC3HC110076.494Heterocephalus_glaber_male
MGP_PahariEiJ_G0021941Zc3hc19438.115ENSHCOG00000014309zc3hc19540.000Hippocampus_comes
MGP_PahariEiJ_G0021941Zc3hc110078.088ENSSTOG00000023599-10078.088Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021941Zc3hc19243.731ENSKMAG00000015315zc3hc18840.695Kryptolebias_marmoratus
MGP_PahariEiJ_G0021941Zc3hc19541.758ENSLBEG00000017325zc3hc19640.351Labrus_bergylta
MGP_PahariEiJ_G0021941Zc3hc18148.301ENSLACG00000013032ZC3HC19748.301Latimeria_chalumnae
MGP_PahariEiJ_G0021941Zc3hc19945.376ENSLOCG00000015963zc3hc19945.866Lepisosteus_oculatus
MGP_PahariEiJ_G0021941Zc3hc110076.285ENSLAFG00000001292ZC3HC110076.285Loxodonta_africana
MGP_PahariEiJ_G0021941Zc3hc110080.080ENSMFAG00000030176ZC3HC110080.080Macaca_fascicularis
MGP_PahariEiJ_G0021941Zc3hc110078.926ENSMMUG00000006155ZC3HC110078.926Macaca_mulatta
MGP_PahariEiJ_G0021941Zc3hc110080.279ENSMNEG00000011833ZC3HC110085.849Macaca_nemestrina
MGP_PahariEiJ_G0021941Zc3hc110080.478ENSMLEG00000027328ZC3HC19985.854Mandrillus_leucophaeus
MGP_PahariEiJ_G0021941Zc3hc19442.012ENSMAMG00000010691zc3hc19640.562Mastacembelus_armatus
MGP_PahariEiJ_G0021941Zc3hc19240.729ENSMZEG00005007142zc3hc19439.059Maylandia_zebra
MGP_PahariEiJ_G0021941Zc3hc19854.910ENSMGAG00000002977ZC3HC19955.311Meleagris_gallopavo
MGP_PahariEiJ_G0021941Zc3hc18182.544ENSMAUG00000017032Zc3hc19282.544Mesocricetus_auratus
MGP_PahariEiJ_G0021941Zc3hc110079.283ENSMICG00000009167ZC3HC110079.283Microcebus_murinus
MGP_PahariEiJ_G0021941Zc3hc110082.036ENSMOCG00000015239Zc3hc110082.036Microtus_ochrogaster
MGP_PahariEiJ_G0021941Zc3hc18639.514ENSMMOG00000002204zc3hc19939.514Mola_mola
MGP_PahariEiJ_G0021941Zc3hc110060.852ENSMODG00000014630ZC3HC110060.852Monodelphis_domestica
MGP_PahariEiJ_G0021941Zc3hc19540.782ENSMALG00000014447zc3hc19640.562Monopterus_albus
MGP_PahariEiJ_G0021941Zc3hc110087.582MGP_CAROLIEiJ_G0028183Zc3hc110087.582Mus_caroli
MGP_PahariEiJ_G0021941Zc3hc110087.582ENSMUSG00000039130Zc3hc110087.582Mus_musculus
MGP_PahariEiJ_G0021941Zc3hc110087.582MGP_SPRETEiJ_G0029183Zc3hc110087.582Mus_spretus
MGP_PahariEiJ_G0021941Zc3hc110077.801ENSMPUG00000005297ZC3HC19578.288Mustela_putorius_furo
MGP_PahariEiJ_G0021941Zc3hc110077.030ENSMLUG00000000063-10077.030Myotis_lucifugus
MGP_PahariEiJ_G0021941Zc3hc16979.114ENSMLUG00000029228-9876.106Myotis_lucifugus
MGP_PahariEiJ_G0021941Zc3hc110079.880ENSNGAG00000019014Zc3hc110079.880Nannospalax_galili
MGP_PahariEiJ_G0021941Zc3hc19241.033ENSNBRG00000004577zc3hc19439.139Neolamprologus_brichardi
MGP_PahariEiJ_G0021941Zc3hc19978.958ENSNLEG00000012698ZC3HC19978.958Nomascus_leucogenys
MGP_PahariEiJ_G0021941Zc3hc110068.725ENSMEUG00000011023ZC3HC110068.725Notamacropus_eugenii
MGP_PahariEiJ_G0021941Zc3hc17466.279ENSOPRG00000007867-6866.279Ochotona_princeps
MGP_PahariEiJ_G0021941Zc3hc110074.502ENSODEG00000014604ZC3HC110074.118Octodon_degus
MGP_PahariEiJ_G0021941Zc3hc19241.641ENSONIG00000011644zc3hc19439.673Oreochromis_niloticus
MGP_PahariEiJ_G0021941Zc3hc19064.655ENSOANG00000011460ZC3HC110064.655Ornithorhynchus_anatinus
MGP_PahariEiJ_G0021941Zc3hc110073.861ENSOCUG00000017137ZC3HC110073.861Oryctolagus_cuniculus
MGP_PahariEiJ_G0021941Zc3hc19343.844ENSORLG00000014409zc3hc19441.344Oryzias_latipes
MGP_PahariEiJ_G0021941Zc3hc19343.544ENSORLG00020015874zc3hc19441.141Oryzias_latipes_hni
MGP_PahariEiJ_G0021941Zc3hc19540.937ENSORLG00015014641zc3hc19440.937Oryzias_latipes_hsok
MGP_PahariEiJ_G0021941Zc3hc19442.857ENSOMEG00000020604zc3hc19441.580Oryzias_melastigma
MGP_PahariEiJ_G0021941Zc3hc19442.857ENSOMEG00000000215zc3hc19441.580Oryzias_melastigma
MGP_PahariEiJ_G0021941Zc3hc110073.684ENSOGAG00000026193ZC3HC110073.307Otolemur_garnettii
MGP_PahariEiJ_G0021941Zc3hc110078.020ENSOARG00000004907ZC3HC19978.020Ovis_aries
MGP_PahariEiJ_G0021941Zc3hc19979.960ENSPPAG00000043172ZC3HC19785.644Pan_paniscus
MGP_PahariEiJ_G0021941Zc3hc110078.685ENSPPRG00000001004ZC3HC110078.685Panthera_pardus
MGP_PahariEiJ_G0021941Zc3hc110079.084ENSPTIG00000007823ZC3HC110079.084Panthera_tigris_altaica
MGP_PahariEiJ_G0021941Zc3hc19979.559ENSPTRG00000019685ZC3HC19785.644Pan_troglodytes
MGP_PahariEiJ_G0021941Zc3hc110079.125ENSPANG00000014229ZC3HC19985.854Papio_anubis
MGP_PahariEiJ_G0021941Zc3hc19443.983ENSPKIG00000007172zc3hc19543.983Paramormyrops_kingsleyae
MGP_PahariEiJ_G0021941Zc3hc19256.376ENSPSIG00000016646ZC3HC110053.021Pelodiscus_sinensis
MGP_PahariEiJ_G0021941Zc3hc18943.802ENSPMGG00000003548zc3hc19538.955Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0021941Zc3hc110082.435ENSPEMG00000000514Zc3hc110082.435Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021941Zc3hc19966.068ENSPCIG00000020619ZC3HC110067.609Phascolarctos_cinereus
MGP_PahariEiJ_G0021941Zc3hc19541.489ENSPFOG00000003466zc3hc19540.000Poecilia_formosa
MGP_PahariEiJ_G0021941Zc3hc19541.489ENSPLAG00000022211zc3hc19540.000Poecilia_latipinna
MGP_PahariEiJ_G0021941Zc3hc19541.489ENSPMEG00000001458zc3hc19540.000Poecilia_mexicana
MGP_PahariEiJ_G0021941Zc3hc19341.867ENSPREG00000004004zc3hc19540.202Poecilia_reticulata
MGP_PahariEiJ_G0021941Zc3hc19976.858ENSPPYG00000017998ZC3HC19976.858Pongo_abelii
MGP_PahariEiJ_G0021941Zc3hc19173.261ENSPCAG00000001182ZC3HC110073.261Procavia_capensis
MGP_PahariEiJ_G0021941Zc3hc110079.482ENSPCOG00000017354ZC3HC110079.482Propithecus_coquereli
MGP_PahariEiJ_G0021941Zc3hc110074.104ENSPVAG00000003195ZC3HC110075.299Pteropus_vampyrus
MGP_PahariEiJ_G0021941Zc3hc19240.729ENSPNYG00000020692zc3hc19439.059Pundamilia_nyererei
MGP_PahariEiJ_G0021941Zc3hc19341.053ENSPNAG00000020746zc3hc19541.053Pygocentrus_nattereri
MGP_PahariEiJ_G0021941Zc3hc110085.458ENSRNOG00000010154Zc3hc110085.458Rattus_norvegicus
MGP_PahariEiJ_G0021941Zc3hc19080.795ENSRBIG00000029409ZC3HC110085.377Rhinopithecus_bieti
MGP_PahariEiJ_G0021941Zc3hc110080.080ENSRROG00000041831ZC3HC19984.878Rhinopithecus_roxellana
MGP_PahariEiJ_G0021941Zc3hc110074.895ENSSBOG00000032787ZC3HC19984.878Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021941Zc3hc19268.817ENSSHAG00000002529ZC3HC110068.817Sarcophilus_harrisii
MGP_PahariEiJ_G0021941Zc3hc19445.987ENSSFOG00015003667zc3hc19145.567Scleropages_formosus
MGP_PahariEiJ_G0021941Zc3hc19244.280ENSSMAG00000000647zc3hc18639.879Scophthalmus_maximus
MGP_PahariEiJ_G0021941Zc3hc19441.667ENSSDUG00000004241zc3hc19440.524Seriola_dumerili
MGP_PahariEiJ_G0021941Zc3hc19441.369ENSSLDG00000025056zc3hc19440.323Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0021941Zc3hc19974.052ENSSARG00000012013ZC3HC19974.052Sorex_araneus
MGP_PahariEiJ_G0021941Zc3hc18951.487ENSSPUG00000000778ZC3HC18657.143Sphenodon_punctatus
MGP_PahariEiJ_G0021941Zc3hc19440.974ENSSPAG00000020041zc3hc19541.010Stegastes_partitus
MGP_PahariEiJ_G0021941Zc3hc110077.689ENSSSCG00000016565ZC3HC110077.689Sus_scrofa
MGP_PahariEiJ_G0021941Zc3hc15059.244ENSTGUG00000016262ZC3HC19759.244Taeniopygia_guttata
MGP_PahariEiJ_G0021941Zc3hc19438.900ENSTRUG00000020077zc3hc19538.900Takifugu_rubripes
MGP_PahariEiJ_G0021941Zc3hc19241.358ENSTNIG00000007585zc3hc19938.669Tetraodon_nigroviridis
MGP_PahariEiJ_G0021941Zc3hc18982.335ENSTBEG00000005216ZC3HC18482.335Tupaia_belangeri
MGP_PahariEiJ_G0021941Zc3hc19578.333ENSTTRG00000008458ZC3HC110078.333Tursiops_truncatus
MGP_PahariEiJ_G0021941Zc3hc110079.283ENSUAMG00000020249ZC3HC110079.283Ursus_americanus
MGP_PahariEiJ_G0021941Zc3hc110078.685ENSUMAG00000009268ZC3HC110078.685Ursus_maritimus
MGP_PahariEiJ_G0021941Zc3hc19087.755ENSVPAG00000010846ZC3HC17787.755Vicugna_pacos
MGP_PahariEiJ_G0021941Zc3hc110079.253ENSVVUG00000012386ZC3HC110079.253Vulpes_vulpes
MGP_PahariEiJ_G0021941Zc3hc19545.610ENSXETG00000033900zc3hc19645.610Xenopus_tropicalis
MGP_PahariEiJ_G0021941Zc3hc19439.351ENSXCOG00000013570zc3hc19541.146Xiphophorus_couchianus
MGP_PahariEiJ_G0021941Zc3hc18940.987ENSXMAG00000010979zc3hc19740.803Xiphophorus_maculatus

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