EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021974 (Gene tree)
Gene ID: 110316077
Gene Symbol: Cnot4
Alias: Not4|Not4h|Not4hp
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 101389 bases
Position: chr2:54432441-54533829
Accession: 110316077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0049353	RRM_1	PF00076.22	1.4e-05	1	1
MGP_PahariEiJ_P0049350	RRM_1	PF00076.22	1.7e-05	1	1
MGP_PahariEiJ_P0049351	RRM_1	PF00076.22	1.7e-05	1	1
MGP_PahariEiJ_P0049352	RRM_1	PF00076.22	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0049352	-	3465	XM_021190156	MGP_PahariEiJ_P0049352	710 (aa)	XP_021045815	UPI000A311DCF
MGP_PahariEiJ_T0049353	-	3341	-	MGP_PahariEiJ_P0049353	575 (aa)	XP_021045818	UPI000A30D538
MGP_PahariEiJ_T0049350	-	3194	-	MGP_PahariEiJ_P0049350	639 (aa)	-	UPI000A30B8A5
MGP_PahariEiJ_T0049351	-	3271	XM_021190157	MGP_PahariEiJ_P0049351	642 (aa)	XP_021045816	UPI000A311727
MGP_PahariEiJ_T0049356	-	561	-	-	- (aa)	-	-
MGP_PahariEiJ_T0049354	-	1857	-	MGP_PahariEiJ_P0049354	572 (aa)	XP_021045819	UPI000A30DC1F
MGP_PahariEiJ_T0049355	-	3950	-	-	- (aa)	-	-
MGP_PahariEiJ_T0049349	-	2786	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0021974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021974	Cnot4	100	98.783	ENSG00000080802	CNOT4	100	98.783	Homo_sapiens
MGP_PahariEiJ_G0021974	Cnot4	93	90.566	ENSAPOG00000016272	cnot4a	82	90.566	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0021974	Cnot4	97	97.246	ENSAMEG00000012081	CNOT4	91	99.535	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021974	Cnot4	100	62.727	ENSACIG00000003011	cnot4a	100	59.333	Amphilophus_citrinellus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSAOCG00000010792	cnot4a	91	90.566	Amphiprion_ocellaris
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSAPEG00000004680	cnot4a	91	90.566	Amphiprion_percula
MGP_PahariEiJ_G0021974	Cnot4	99	90.189	ENSATEG00000017580	cnot4a	91	90.189	Anabas_testudineus
MGP_PahariEiJ_G0021974	Cnot4	100	87.533	ENSAPLG00000016441	CNOT4	100	87.533	Anas_platyrhynchos
MGP_PahariEiJ_G0021974	Cnot4	100	87.664	ENSACAG00000011154	CNOT4	100	87.664	Anolis_carolinensis
MGP_PahariEiJ_G0021974	Cnot4	100	98.951	ENSANAG00000032156	CNOT4	100	98.951	Aotus_nancymaae
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSACLG00000002514	cnot4a	91	90.566	Astatotilapia_calliptera
MGP_PahariEiJ_G0021974	Cnot4	100	72.936	ENSAMXG00000001373	cnot4a	100	72.018	Astyanax_mexicanus
MGP_PahariEiJ_G0021974	Cnot4	100	92.620	ENSAMXG00000011473	cnot4b	100	71.049	Astyanax_mexicanus
MGP_PahariEiJ_G0021974	Cnot4	100	98.957	ENSBTAG00000017919	CNOT4	100	98.957	Bos_taurus
MGP_PahariEiJ_G0021974	Cnot4	100	98.951	ENSCJAG00000012532	CNOT4	100	98.951	Callithrix_jacchus
MGP_PahariEiJ_G0021974	Cnot4	100	99.301	ENSCAFG00000003223	CNOT4	100	99.301	Canis_familiaris
MGP_PahariEiJ_G0021974	Cnot4	100	99.301	ENSCAFG00020000093	CNOT4	100	99.301	Canis_lupus_dingo
MGP_PahariEiJ_G0021974	Cnot4	100	99.126	ENSCHIG00000010955	CNOT4	100	99.126	Capra_hircus
MGP_PahariEiJ_G0021974	Cnot4	100	99.126	ENSTSYG00000000893	CNOT4	100	99.126	Carlito_syrichta
MGP_PahariEiJ_G0021974	Cnot4	100	94.930	ENSCAPG00000006213	CNOT4	100	94.930	Cavia_aperea
MGP_PahariEiJ_G0021974	Cnot4	100	97.902	ENSCPOG00000011526	CNOT4	100	97.902	Cavia_porcellus
MGP_PahariEiJ_G0021974	Cnot4	100	98.957	ENSCCAG00000024414	CNOT4	100	98.957	Cebus_capucinus
MGP_PahariEiJ_G0021974	Cnot4	100	98.957	ENSCATG00000022607	CNOT4	100	98.957	Cercocebus_atys
MGP_PahariEiJ_G0021974	Cnot4	100	98.427	ENSCLAG00000001857	CNOT4	100	98.427	Chinchilla_lanigera
MGP_PahariEiJ_G0021974	Cnot4	100	98.310	ENSCSAG00000009096	CNOT4	100	98.310	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021974	Cnot4	68	99.465	ENSCHOG00000010412	CNOT4	63	99.465	Choloepus_hoffmanni
MGP_PahariEiJ_G0021974	Cnot4	100	94.530	ENSCPBG00000004959	CNOT4	100	94.530	Chrysemys_picta_bellii
MGP_PahariEiJ_G0021974	Cnot4	66	69.323	ENSCING00000004364	-	93	41.291	Ciona_intestinalis
MGP_PahariEiJ_G0021974	Cnot4	100	98.776	ENSCANG00000029319	CNOT4	100	98.776	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021974	Cnot4	100	99.826	ENSCGRG00001014651	Cnot4	100	99.826	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021974	Cnot4	100	99.825	ENSCGRG00000005727	Cnot4	100	99.825	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0021974	Cnot4	94	90.566	ENSCSEG00000015080	cnot4a	84	90.566	Cynoglossus_semilaevis
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSCVAG00000009399	cnot4a	91	90.566	Cyprinodon_variegatus
MGP_PahariEiJ_G0021974	Cnot4	100	66.708	ENSDARG00000007639	cnot4b	100	66.129	Danio_rerio
MGP_PahariEiJ_G0021974	Cnot4	100	70.789	ENSDARG00000007045	cnot4a	100	70.284	Danio_rerio
MGP_PahariEiJ_G0021974	Cnot4	100	96.914	ENSDNOG00000009409	CNOT4	100	96.914	Dasypus_novemcinctus
MGP_PahariEiJ_G0021974	Cnot4	100	98.783	ENSDORG00000012268	Cnot4	100	98.783	Dipodomys_ordii
MGP_PahariEiJ_G0021974	Cnot4	100	91.445	ENSETEG00000013407	CNOT4	89	93.899	Echinops_telfairi
MGP_PahariEiJ_G0021974	Cnot4	100	98.783	ENSEASG00005014430	CNOT4	100	98.783	Equus_asinus_asinus
MGP_PahariEiJ_G0021974	Cnot4	100	98.783	ENSECAG00000020262	CNOT4	100	98.783	Equus_caballus
MGP_PahariEiJ_G0021974	Cnot4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
MGP_PahariEiJ_G0021974	Cnot4	100	73.887	ENSELUG00000011540	cnot4b	98	71.625	Esox_lucius
MGP_PahariEiJ_G0021974	Cnot4	100	99.301	ENSFCAG00000011904	CNOT4	100	99.301	Felis_catus
MGP_PahariEiJ_G0021974	Cnot4	100	87.927	ENSFALG00000011194	CNOT4	100	87.927	Ficedula_albicollis
MGP_PahariEiJ_G0021974	Cnot4	100	98.783	ENSFDAG00000013525	CNOT4	100	98.783	Fukomys_damarensis
MGP_PahariEiJ_G0021974	Cnot4	100	89.259	ENSFHEG00000006608	cnot4a	100	72.231	Fundulus_heteroclitus
MGP_PahariEiJ_G0021974	Cnot4	95	59.459	ENSGMOG00000001329	cnot4a	97	60.000	Gadus_morhua
MGP_PahariEiJ_G0021974	Cnot4	100	93.829	ENSGALG00000011682	CNOT4	100	93.829	Gallus_gallus
MGP_PahariEiJ_G0021974	Cnot4	99	90.189	ENSGACG00000004276	cnot4a	91	90.189	Gasterosteus_aculeatus
MGP_PahariEiJ_G0021974	Cnot4	100	93.969	ENSGAGG00000017331	CNOT4	100	93.969	Gopherus_agassizii
MGP_PahariEiJ_G0021974	Cnot4	92	97.949	ENSGGOG00000000142	CNOT4	99	98.069	Gorilla_gorilla
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSHBUG00000000027	cnot4a	91	90.566	Haplochromis_burtoni
MGP_PahariEiJ_G0021974	Cnot4	100	99.130	ENSHGLG00000011533	CNOT4	100	99.130	Heterocephalus_glaber_female
MGP_PahariEiJ_G0021974	Cnot4	100	99.130	ENSHGLG00100013058	CNOT4	100	99.130	Heterocephalus_glaber_male
MGP_PahariEiJ_G0021974	Cnot4	98	89.434	ENSHCOG00000015815	cnot4a	91	89.434	Hippocampus_comes
MGP_PahariEiJ_G0021974	Cnot4	100	91.481	ENSIPUG00000006393	cnot4	91	91.481	Ictalurus_punctatus
MGP_PahariEiJ_G0021974	Cnot4	100	71.365	ENSIPUG00000016994	cnot4b	100	70.772	Ictalurus_punctatus
MGP_PahariEiJ_G0021974	Cnot4	100	99.126	ENSSTOG00000007717	CNOT4	100	99.126	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021974	Cnot4	100	98.776	ENSJJAG00000016618	Cnot4	100	98.776	Jaculus_jaculus
MGP_PahariEiJ_G0021974	Cnot4	100	81.294	ENSJJAG00000019991	-	100	81.294	Jaculus_jaculus
MGP_PahariEiJ_G0021974	Cnot4	94	90.566	ENSKMAG00000004581	cnot4a	100	72.824	Kryptolebias_marmoratus
MGP_PahariEiJ_G0021974	Cnot4	99	90.943	ENSLBEG00000009999	cnot4a	91	90.943	Labrus_bergylta
MGP_PahariEiJ_G0021974	Cnot4	100	83.261	ENSLACG00000002647	CNOT4	99	83.261	Latimeria_chalumnae
MGP_PahariEiJ_G0021974	Cnot4	100	93.382	ENSLOCG00000016126	cnot4a	92	93.382	Lepisosteus_oculatus
MGP_PahariEiJ_G0021974	Cnot4	100	96.353	ENSLAFG00000000709	CNOT4	100	96.353	Loxodonta_africana
MGP_PahariEiJ_G0021974	Cnot4	100	98.951	ENSMFAG00000046349	CNOT4	100	98.951	Macaca_fascicularis
MGP_PahariEiJ_G0021974	Cnot4	100	98.957	ENSMMUG00000016181	CNOT4	100	98.957	Macaca_mulatta
MGP_PahariEiJ_G0021974	Cnot4	100	98.951	ENSMNEG00000042164	CNOT4	100	98.951	Macaca_nemestrina
MGP_PahariEiJ_G0021974	Cnot4	100	98.951	ENSMLEG00000032709	CNOT4	100	98.951	Mandrillus_leucophaeus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSMAMG00000023194	cnot4a	91	90.566	Mastacembelus_armatus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSMZEG00005007312	cnot4a	91	90.566	Maylandia_zebra
MGP_PahariEiJ_G0021974	Cnot4	100	87.402	ENSMGAG00000011788	CNOT4	100	87.402	Meleagris_gallopavo
MGP_PahariEiJ_G0021974	Cnot4	100	99.478	ENSMAUG00000020415	Cnot4	100	99.478	Mesocricetus_auratus
MGP_PahariEiJ_G0021974	Cnot4	100	99.304	ENSMICG00000001667	CNOT4	100	99.304	Microcebus_murinus
MGP_PahariEiJ_G0021974	Cnot4	100	99.652	ENSMOCG00000020955	Cnot4	100	99.652	Microtus_ochrogaster
MGP_PahariEiJ_G0021974	Cnot4	96	73.625	ENSMMOG00000014565	cnot4a	97	74.916	Mola_mola
MGP_PahariEiJ_G0021974	Cnot4	100	96.338	ENSMODG00000014068	CNOT4	100	96.338	Monodelphis_domestica
MGP_PahariEiJ_G0021974	Cnot4	93	90.566	ENSMALG00000011662	cnot4a	80	90.566	Monopterus_albus
MGP_PahariEiJ_G0021974	Cnot4	100	99.579	MGP_CAROLIEiJ_G0028217	Cnot4	100	99.579	Mus_caroli
MGP_PahariEiJ_G0021974	Cnot4	100	99.718	ENSMUSG00000038784	Cnot4	100	99.718	Mus_musculus
MGP_PahariEiJ_G0021974	Cnot4	100	99.577	MGP_SPRETEiJ_G0029216	Cnot4	100	99.577	Mus_spretus
MGP_PahariEiJ_G0021974	Cnot4	100	98.310	ENSMPUG00000004089	CNOT4	100	98.310	Mustela_putorius_furo
MGP_PahariEiJ_G0021974	Cnot4	100	98.598	ENSMLUG00000008260	CNOT4	100	98.598	Myotis_lucifugus
MGP_PahariEiJ_G0021974	Cnot4	100	98.609	ENSNGAG00000015030	Cnot4	100	98.609	Nannospalax_galili
MGP_PahariEiJ_G0021974	Cnot4	100	70.997	ENSNBRG00000021144	cnot4a	100	70.588	Neolamprologus_brichardi
MGP_PahariEiJ_G0021974	Cnot4	100	98.435	ENSNLEG00000013352	CNOT4	100	98.435	Nomascus_leucogenys
MGP_PahariEiJ_G0021974	Cnot4	88	95.970	ENSOPRG00000001023	CNOT4	82	95.970	Ochotona_princeps
MGP_PahariEiJ_G0021974	Cnot4	100	98.087	ENSODEG00000012975	CNOT4	100	98.087	Octodon_degus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSONIG00000008656	cnot4a	91	90.566	Oreochromis_niloticus
MGP_PahariEiJ_G0021974	Cnot4	100	94.663	ENSOANG00000005006	CNOT4	100	94.663	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0021974	Cnot4	100	98.169	ENSOCUG00000013448	CNOT4	100	98.169	Oryctolagus_cuniculus
MGP_PahariEiJ_G0021974	Cnot4	100	73.160	ENSORLG00000003727	cnot4a	100	72.699	Oryzias_latipes
MGP_PahariEiJ_G0021974	Cnot4	100	72.879	ENSORLG00020015684	cnot4a	91	91.321	Oryzias_latipes_hni
MGP_PahariEiJ_G0021974	Cnot4	100	73.466	ENSORLG00015008470	cnot4a	91	91.321	Oryzias_latipes_hsok
MGP_PahariEiJ_G0021974	Cnot4	100	72.393	ENSOMEG00000011084	cnot4a	91	90.943	Oryzias_melastigma
MGP_PahariEiJ_G0021974	Cnot4	100	97.896	ENSOGAG00000015499	CNOT4	100	97.896	Otolemur_garnettii
MGP_PahariEiJ_G0021974	Cnot4	100	97.335	ENSOARG00000008803	CNOT4	100	97.335	Ovis_aries
MGP_PahariEiJ_G0021974	Cnot4	100	98.609	ENSPPAG00000041937	CNOT4	100	98.609	Pan_paniscus
MGP_PahariEiJ_G0021974	Cnot4	100	99.304	ENSPPRG00000023940	CNOT4	100	99.304	Panthera_pardus
MGP_PahariEiJ_G0021974	Cnot4	100	99.301	ENSPTIG00000016601	CNOT4	100	99.301	Panthera_tigris_altaica
MGP_PahariEiJ_G0021974	Cnot4	100	98.609	ENSPTRG00000019727	CNOT4	100	98.609	Pan_troglodytes
MGP_PahariEiJ_G0021974	Cnot4	100	98.783	ENSPANG00000017724	CNOT4	100	98.783	Papio_anubis
MGP_PahariEiJ_G0021974	Cnot4	100	72.317	ENSPKIG00000018137	cnot4a	100	72.006	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0021974	Cnot4	100	86.239	ENSPSIG00000011256	CNOT4	99	89.216	Pelodiscus_sinensis
MGP_PahariEiJ_G0021974	Cnot4	100	73.071	ENSPMGG00000005671	cnot4a	100	72.920	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0021974	Cnot4	100	99.652	ENSPEMG00000021566	Cnot4	100	99.652	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021974	Cnot4	100	96.088	ENSPCIG00000029622	CNOT4	96	95.915	Phascolarctos_cinereus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSPFOG00000002228	cnot4a	91	90.566	Poecilia_formosa
MGP_PahariEiJ_G0021974	Cnot4	100	73.059	ENSPLAG00000001780	cnot4a	100	72.603	Poecilia_latipinna
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSPMEG00000006852	cnot4a	91	90.566	Poecilia_mexicana
MGP_PahariEiJ_G0021974	Cnot4	100	71.380	ENSPREG00000008171	cnot4a	100	69.612	Poecilia_reticulata
MGP_PahariEiJ_G0021974	Cnot4	100	98.028	ENSPPYG00000018026	CNOT4	100	98.028	Pongo_abelii
MGP_PahariEiJ_G0021974	Cnot4	100	99.301	ENSPCOG00000019907	CNOT4	100	99.301	Propithecus_coquereli
MGP_PahariEiJ_G0021974	Cnot4	97	95.797	ENSPVAG00000004905	CNOT4	90	95.797	Pteropus_vampyrus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSPNYG00000004276	cnot4a	91	90.566	Pundamilia_nyererei
MGP_PahariEiJ_G0021974	Cnot4	100	93.727	ENSPNAG00000008679	cnot4b	100	74.738	Pygocentrus_nattereri
MGP_PahariEiJ_G0021974	Cnot4	100	72.522	ENSPNAG00000020433	cnot4a	100	71.585	Pygocentrus_nattereri
MGP_PahariEiJ_G0021974	Cnot4	100	99.014	ENSRNOG00000010795	Cnot4	100	99.014	Rattus_norvegicus
MGP_PahariEiJ_G0021974	Cnot4	100	98.957	ENSRBIG00000043977	CNOT4	100	98.957	Rhinopithecus_bieti
MGP_PahariEiJ_G0021974	Cnot4	100	98.776	ENSSBOG00000020808	CNOT4	100	98.776	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021974	Cnot4	100	96.197	ENSSHAG00000013639	CNOT4	100	96.197	Sarcophilus_harrisii
MGP_PahariEiJ_G0021974	Cnot4	100	91.912	ENSSFOG00015017285	CNOT4	92	91.912	Scleropages_formosus
MGP_PahariEiJ_G0021974	Cnot4	100	90.074	ENSSFOG00015002019	cnot4a	91	90.074	Scleropages_formosus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSSMAG00000008614	cnot4a	91	90.566	Scophthalmus_maximus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSSDUG00000022635	cnot4a	91	90.566	Seriola_dumerili
MGP_PahariEiJ_G0021974	Cnot4	100	71.451	ENSSDUG00000018585	cnot4b	100	71.275	Seriola_dumerili
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSSLDG00000015770	cnot4a	91	90.566	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0021974	Cnot4	100	61.765	ENSSLDG00000014347	cnot4b	95	66.007	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0021974	Cnot4	100	94.860	ENSSPUG00000004677	CNOT4	100	94.860	Sphenodon_punctatus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSSPAG00000012329	cnot4a	91	90.566	Stegastes_partitus
MGP_PahariEiJ_G0021974	Cnot4	100	99.130	ENSSSCG00000021354	CNOT4	100	99.130	Sus_scrofa
MGP_PahariEiJ_G0021974	Cnot4	100	88.058	ENSTGUG00000009161	CNOT4	100	88.058	Taeniopygia_guttata
MGP_PahariEiJ_G0021974	Cnot4	100	89.259	ENSTRUG00000016861	cnot4a	92	89.259	Takifugu_rubripes
MGP_PahariEiJ_G0021974	Cnot4	100	69.349	ENSTNIG00000016000	cnot4a	100	69.512	Tetraodon_nigroviridis
MGP_PahariEiJ_G0021974	Cnot4	94	97.232	ENSTBEG00000002202	CNOT4	86	92.857	Tupaia_belangeri
MGP_PahariEiJ_G0021974	Cnot4	97	96.961	ENSTTRG00000005122	CNOT4	90	96.961	Tursiops_truncatus
MGP_PahariEiJ_G0021974	Cnot4	100	99.304	ENSUAMG00000026759	CNOT4	100	99.304	Ursus_americanus
MGP_PahariEiJ_G0021974	Cnot4	100	99.304	ENSUMAG00000015351	CNOT4	100	99.304	Ursus_maritimus
MGP_PahariEiJ_G0021974	Cnot4	100	99.304	ENSVVUG00000006200	CNOT4	100	99.304	Vulpes_vulpes
MGP_PahariEiJ_G0021974	Cnot4	100	98.519	ENSXETG00000010594	cnot4	92	98.519	Xenopus_tropicalis
MGP_PahariEiJ_G0021974	Cnot4	94	72.426	ENSXCOG00000020824	cnot4a	98	71.057	Xiphophorus_couchianus
MGP_PahariEiJ_G0021974	Cnot4	99	90.566	ENSXMAG00000016984	cnot4a	91	90.566	Xiphophorus_maculatus