EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022097 (Gene tree)
Gene ID: 110316636
Gene Symbol: Repin1
Alias: AP4|E430037F08Rik|Zfp464
Full Name: replication initiator 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 5035 bases
Position: chr2:67289999-67295033
Accession: 110316636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	1	9
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	2	9
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	3	9
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	4	9
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	5	9
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	6	9
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	7	9
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	8	9
MGP_PahariEiJ_P0049781	zf-C2H2	PF00096.26	1.6e-66	9	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	1	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	2	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	3	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	4	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	5	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	6	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	7	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	8	9
MGP_PahariEiJ_P0049782	zf-C2H2	PF00096.26	1.6e-66	9	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	1	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	2	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	3	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	4	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	5	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	6	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	7	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	8	9
MGP_PahariEiJ_P0049783	zf-C2H2	PF00096.26	8.3e-66	9	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	1	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	2	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	3	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	4	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	5	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	6	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	7	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	8	9
MGP_PahariEiJ_P0049784	zf-C2H2	PF00096.26	9e-66	9	9
MGP_PahariEiJ_P0049780	zf-C2H2	PF00096.26	1.2e-31	1	5
MGP_PahariEiJ_P0049780	zf-C2H2	PF00096.26	1.2e-31	2	5
MGP_PahariEiJ_P0049780	zf-C2H2	PF00096.26	1.2e-31	3	5
MGP_PahariEiJ_P0049780	zf-C2H2	PF00096.26	1.2e-31	4	5
MGP_PahariEiJ_P0049780	zf-C2H2	PF00096.26	1.2e-31	5	5
MGP_PahariEiJ_P0049780	zf-met	PF12874.7	5.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0049781	-	3033	-	MGP_PahariEiJ_P0049781	546 (aa)	-	-
MGP_PahariEiJ_T0049780	-	1268	-	MGP_PahariEiJ_P0049780	361 (aa)	-	-
MGP_PahariEiJ_T0049783	-	3026	-	MGP_PahariEiJ_P0049783	601 (aa)	-	-
MGP_PahariEiJ_T0049782	-	2841	-	MGP_PahariEiJ_P0049782	546 (aa)	-	-
MGP_PahariEiJ_T0049785	-	663	-	-	- (aa)	-	-
MGP_PahariEiJ_T0049784	-	2945	-	MGP_PahariEiJ_P0049784	604 (aa)	XP_021046716	UPI000A30B7F5
MGP_PahariEiJ_T0049788	-	1002	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0022097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0022097	Repin1	93	33.661	MGP_PahariEiJ_G0023460	Zfp945	78	33.621
MGP_PahariEiJ_G0022097	Repin1	80	35.196	MGP_PahariEiJ_G0021012	-	74	31.227
MGP_PahariEiJ_G0022097	Repin1	80	33.906	MGP_PahariEiJ_G0021013	Zfp784	68	33.493
MGP_PahariEiJ_G0022097	Repin1	87	38.710	MGP_PahariEiJ_G0021011	-	78	38.710
MGP_PahariEiJ_G0022097	Repin1	95	38.503	MGP_PahariEiJ_G0019959	Zfp251	63	46.154
MGP_PahariEiJ_G0022097	Repin1	95	41.729	MGP_PahariEiJ_G0023178	Zfp1	73	41.729
MGP_PahariEiJ_G0022097	Repin1	91	31.746	MGP_PahariEiJ_G0021668	Zfp882	88	36.137
MGP_PahariEiJ_G0022097	Repin1	95	33.581	MGP_PahariEiJ_G0012663	-	80	35.604
MGP_PahariEiJ_G0022097	Repin1	90	45.550	MGP_PahariEiJ_G0021003	Zfp628	60	45.545
MGP_PahariEiJ_G0022097	Repin1	90	47.287	MGP_PahariEiJ_G0017280	Gfi1	100	47.287
MGP_PahariEiJ_G0022097	Repin1	91	39.048	MGP_PahariEiJ_G0017567	Zfp867	80	39.423
MGP_PahariEiJ_G0022097	Repin1	92	46.711	MGP_PahariEiJ_G0012724	Zfp420	98	46.711
MGP_PahariEiJ_G0022097	Repin1	91	38.614	MGP_PahariEiJ_G0029075	Zbtb17	62	38.614
MGP_PahariEiJ_G0022097	Repin1	93	42.069	MGP_PahariEiJ_G0022203	Prdm5	68	42.361
MGP_PahariEiJ_G0022097	Repin1	95	45.946	MGP_PahariEiJ_G0019324	Zkscan4	54	45.946
MGP_PahariEiJ_G0022097	Repin1	86	45.000	MGP_PahariEiJ_G0013707	Zfp768	67	39.595
MGP_PahariEiJ_G0022097	Repin1	91	40.411	MGP_PahariEiJ_G0013709	-	69	40.741
MGP_PahariEiJ_G0022097	Repin1	91	40.411	MGP_PahariEiJ_G0013708	-	69	40.741
MGP_PahariEiJ_G0022097	Repin1	93	35.036	MGP_PahariEiJ_G0021209	Zfp574	96	35.354
MGP_PahariEiJ_G0022097	Repin1	91	32.252	MGP_PahariEiJ_G0015756	Zfp748	92	31.898
MGP_PahariEiJ_G0022097	Repin1	91	38.621	MGP_PahariEiJ_G0025706	Zfp661	59	47.436
MGP_PahariEiJ_G0022097	Repin1	91	44.681	MGP_PahariEiJ_G0012839	-	56	44.681
MGP_PahariEiJ_G0022097	Repin1	95	42.735	MGP_PahariEiJ_G0019173	Zfp236	79	44.304
MGP_PahariEiJ_G0022097	Repin1	97	41.667	MGP_PahariEiJ_G0016960	Zbtb49	65	47.222
MGP_PahariEiJ_G0022097	Repin1	91	35.714	MGP_PahariEiJ_G0026165	Zfp64	95	40.659
MGP_PahariEiJ_G0022097	Repin1	91	39.450	MGP_PahariEiJ_G0023447	Zfp51	74	39.450
MGP_PahariEiJ_G0022097	Repin1	91	41.562	MGP_PahariEiJ_G0017434	Zfp354b	70	48.810
MGP_PahariEiJ_G0022097	Repin1	92	31.280	MGP_PahariEiJ_G0023018	Zfp319	93	31.373
MGP_PahariEiJ_G0022097	Repin1	92	36.264	MGP_PahariEiJ_G0017548	Zfp39	60	36.269
MGP_PahariEiJ_G0022097	Repin1	90	31.395	MGP_PahariEiJ_G0013732	Zfp646	66	39.286
MGP_PahariEiJ_G0022097	Repin1	98	37.500	MGP_PahariEiJ_G0021178	Zfp93	99	37.500
MGP_PahariEiJ_G0022097	Repin1	92	34.967	MGP_PahariEiJ_G0021177	Zfp108	72	36.124
MGP_PahariEiJ_G0022097	Repin1	98	39.955	MGP_PahariEiJ_G0021173	Zfp235	73	36.928
MGP_PahariEiJ_G0022097	Repin1	95	36.259	MGP_PahariEiJ_G0021172	Zfp112	58	36.222
MGP_PahariEiJ_G0022097	Repin1	91	36.031	MGP_PahariEiJ_G0015741	Zfp759	90	35.248
MGP_PahariEiJ_G0022097	Repin1	90	46.584	MGP_PahariEiJ_G0026346	Mynn	51	43.979
MGP_PahariEiJ_G0022097	Repin1	98	41.250	MGP_PahariEiJ_G0018140	Zfp652	53	41.250
MGP_PahariEiJ_G0022097	Repin1	93	35.602	MGP_PahariEiJ_G0017441	Zfp354a	70	37.135
MGP_PahariEiJ_G0022097	Repin1	92	39.560	MGP_PahariEiJ_G0021180	Zfp94	70	38.509
MGP_PahariEiJ_G0022097	Repin1	95	47.895	MGP_PahariEiJ_G0022533	Zfp637	82	50.909
MGP_PahariEiJ_G0022097	Repin1	74	37.584	MGP_PahariEiJ_G0024597	Gtf3a	90	37.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022097	Repin1	100	83.942	ENSCHIG00000019982	REPIN1	100	84.672	Capra_hircus
MGP_PahariEiJ_G0022097	Repin1	100	91.423	ENSCGRG00001017330	Repin1	99	88.870	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022097	Repin1	100	90.328	ENSCGRG00000015472	Repin1	99	88.067	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022097	Repin1	100	91.439	ENSMAUG00000005776	Repin1	100	91.439	Mesocricetus_auratus
MGP_PahariEiJ_G0022097	Repin1	100	92.153	ENSMOCG00000021124	Repin1	100	90.547	Microtus_ochrogaster
MGP_PahariEiJ_G0022097	Repin1	100	53.376	ENSMODG00000003616	-	92	60.947	Monodelphis_domestica
MGP_PahariEiJ_G0022097	Repin1	100	97.436	MGP_CAROLIEiJ_G0028343	Repin1	100	97.436	Mus_caroli
MGP_PahariEiJ_G0022097	Repin1	100	97.436	ENSMUSG00000052751	Repin1	100	97.436	Mus_musculus
MGP_PahariEiJ_G0022097	Repin1	100	97.619	MGP_SPRETEiJ_G0029346	Repin1	100	97.619	Mus_spretus
MGP_PahariEiJ_G0022097	Repin1	100	92.701	ENSPEMG00000000870	Repin1	100	91.391	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022097	Repin1	100	95.985	ENSRNOG00000008239	Repin1	100	95.199	Rattus_norvegicus