EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022115 (Gene tree)
Gene ID: 110316478
Gene Symbol: Tra2a
Alias: 1500010G04Rik|G430041M01Rik|mAWMS1
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 21662 bases
Position: chr2:67930237-67951898
Accession: 110316478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0049847	RRM_1	PF00076.22	2.7e-19	1	1
MGP_PahariEiJ_P0049850	RRM_1	PF00076.22	2.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0049851	-	3645	-	-	- (aa)	-	-
MGP_PahariEiJ_T0049850	-	1793	XM_021190820	MGP_PahariEiJ_P0049850	282 (aa)	XP_021046479	UPI000A31370E
MGP_PahariEiJ_T0049848	-	2085	-	MGP_PahariEiJ_P0049848	59 (aa)	-	UPI00001F3BCD
MGP_PahariEiJ_T0049849	-	3053	-	-	- (aa)	-	-
MGP_PahariEiJ_T0049847	-	1771	-	MGP_PahariEiJ_P0049847	280 (aa)	-	UPI000A30E01B

Gene Model

Click here to download MGP_PahariEiJ_G0022115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0022115	Tra2a	59	37.097	MGP_PahariEiJ_G0028622	Elavl4	72	35.821
MGP_PahariEiJ_G0022115	Tra2a	59	31.250	MGP_PahariEiJ_G0028496	Elavl2	66	35.938
MGP_PahariEiJ_G0022115	Tra2a	60	65.263	MGP_PahariEiJ_G0016306	Tra2b	80	64.919

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSG00000164548	TRA2A	100	98.907	Homo_sapiens
MGP_PahariEiJ_G0022115	Tra2a	90	69.963	ENSAPOG00000017425	tra2a	90	74.725	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022115	Tra2a	95	95.971	ENSAMEG00000003501	TRA2A	84	95.971	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022115	Tra2a	55	86.364	ENSACIG00000001333	tra2a	79	86.364	Amphilophus_citrinellus
MGP_PahariEiJ_G0022115	Tra2a	90	70.696	ENSAOCG00000015445	tra2a	90	75.458	Amphiprion_ocellaris
MGP_PahariEiJ_G0022115	Tra2a	90	70.696	ENSAPEG00000018557	tra2a	90	75.458	Amphiprion_percula
MGP_PahariEiJ_G0022115	Tra2a	90	72.527	ENSATEG00000000671	tra2a	90	76.923	Anabas_testudineus
MGP_PahariEiJ_G0022115	Tra2a	86	89.388	ENSAPLG00000013689	TRA2A	90	90.204	Anas_platyrhynchos
MGP_PahariEiJ_G0022115	Tra2a	100	95.070	ENSACAG00000013502	TRA2A	100	95.070	Anolis_carolinensis
MGP_PahariEiJ_G0022115	Tra2a	90	76.557	ENSACLG00000024845	tra2a	90	78.388	Astatotilapia_calliptera
MGP_PahariEiJ_G0022115	Tra2a	61	90.751	ENSAMXG00000005553	tra2a	98	86.831	Astyanax_mexicanus
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSBTAG00000012622	TRA2A	100	97.887	Bos_taurus
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSCJAG00000001509	-	100	98.239	Callithrix_jacchus
MGP_PahariEiJ_G0022115	Tra2a	94	96.241	ENSCJAG00000045802	-	100	96.241	Callithrix_jacchus
MGP_PahariEiJ_G0022115	Tra2a	99	97.865	ENSCAFG00000002788	TRA2A	100	97.865	Canis_familiaris
MGP_PahariEiJ_G0022115	Tra2a	90	97.266	ENSCAFG00020002745	TRA2A	95	97.266	Canis_lupus_dingo
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSTSYG00000000388	TRA2A	100	98.907	Carlito_syrichta
MGP_PahariEiJ_G0022115	Tra2a	86	83.197	ENSCAPG00000017377	TRA2A	87	83.951	Cavia_aperea
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSCPOG00000010739	TRA2A	100	98.239	Cavia_porcellus
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSCCAG00000019576	TRA2A	100	98.907	Cebus_capucinus
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSCATG00000041219	TRA2A	100	98.907	Cercocebus_atys
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSCLAG00000007917	TRA2A	100	98.239	Chinchilla_lanigera
MGP_PahariEiJ_G0022115	Tra2a	99	98.221	ENSCSAG00000014051	TRA2A	99	98.221	Chlorocebus_sabaeus
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSCHOG00000001130	TRA2A	100	97.887	Choloepus_hoffmanni
MGP_PahariEiJ_G0022115	Tra2a	90	92.218	ENSCPBG00000022466	TRA2A	90	92.996	Chrysemys_picta_bellii
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSCANG00000031292	TRA2A	100	98.907	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022115	Tra2a	100	99.645	ENSCGRG00001019980	Tra2a	100	99.645	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022115	Tra2a	96	99.630	ENSCGRG00000006087	Tra2a	100	99.630	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022115	Tra2a	90	72.794	ENSCSEG00000012193	tra2a	90	73.162	Cynoglossus_semilaevis
MGP_PahariEiJ_G0022115	Tra2a	90	77.206	ENSDARG00000007863	tra2a	87	80.925	Danio_rerio
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSDNOG00000039446	TRA2A	100	97.887	Dasypus_novemcinctus
MGP_PahariEiJ_G0022115	Tra2a	100	98.936	ENSDORG00000009361	Tra2a	100	98.936	Dipodomys_ordii
MGP_PahariEiJ_G0022115	Tra2a	100	82.230	ENSETEG00000007250	TRA2A	100	82.230	Echinops_telfairi
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSEASG00005022002	TRA2A	100	97.887	Equus_asinus_asinus
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSECAG00000011508	TRA2A	100	97.887	Equus_caballus
MGP_PahariEiJ_G0022115	Tra2a	100	97.183	ENSEEUG00000015674	TRA2A	100	97.183	Erinaceus_europaeus
MGP_PahariEiJ_G0022115	Tra2a	76	75.641	ENSELUG00000005846	tra2a	91	70.370	Esox_lucius
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSFCAG00000005361	TRA2A	100	97.887	Felis_catus
MGP_PahariEiJ_G0022115	Tra2a	86	90.947	ENSFALG00000009605	TRA2A	89	91.358	Ficedula_albicollis
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSFDAG00000004949	TRA2A	100	98.239	Fukomys_damarensis
MGP_PahariEiJ_G0022115	Tra2a	90	71.273	ENSGMOG00000013740	tra2a	91	71.636	Gadus_morhua
MGP_PahariEiJ_G0022115	Tra2a	90	89.883	ENSGALG00000010973	TRA2A	90	90.661	Gallus_gallus
MGP_PahariEiJ_G0022115	Tra2a	90	76.562	ENSGACG00000006878	tra2a	89	76.562	Gasterosteus_aculeatus
MGP_PahariEiJ_G0022115	Tra2a	90	91.440	ENSGAGG00000005793	TRA2A	90	92.218	Gopherus_agassizii
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSGGOG00000009053	TRA2A	100	98.239	Gorilla_gorilla
MGP_PahariEiJ_G0022115	Tra2a	90	77.289	ENSHBUG00000018234	tra2a	90	79.121	Haplochromis_burtoni
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSHGLG00000012168	TRA2A	100	98.239	Heterocephalus_glaber_female
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSHGLG00100014577	TRA2A	100	98.239	Heterocephalus_glaber_male
MGP_PahariEiJ_G0022115	Tra2a	62	61.979	ENSHCOG00000006320	tra2a	96	60.938	Hippocampus_comes
MGP_PahariEiJ_G0022115	Tra2a	65	64.583	ENSHCOG00000006314	tra2a	86	63.372	Hippocampus_comes
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSSTOG00000012073	TRA2A	100	98.239	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022115	Tra2a	100	98.936	ENSJJAG00000022787	Tra2a	100	98.936	Jaculus_jaculus
MGP_PahariEiJ_G0022115	Tra2a	86	74.330	ENSLBEG00000005297	tra2a	88	75.862	Labrus_bergylta
MGP_PahariEiJ_G0022115	Tra2a	90	84.706	ENSLACG00000014765	TRA2A	90	86.275	Latimeria_chalumnae
MGP_PahariEiJ_G0022115	Tra2a	90	75.092	ENSLOCG00000011615	-	90	75.458	Lepisosteus_oculatus
MGP_PahariEiJ_G0022115	Tra2a	100	98.592	ENSLAFG00000006598	TRA2A	100	98.592	Loxodonta_africana
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSMFAG00000043211	TRA2A	100	98.907	Macaca_fascicularis
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSMMUG00000006286	TRA2A	100	98.239	Macaca_mulatta
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSMNEG00000040670	TRA2A	100	98.907	Macaca_nemestrina
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSMLEG00000032154	TRA2A	100	98.907	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022115	Tra2a	76	78.541	ENSMAMG00000008575	tra2a	90	81.034	Mastacembelus_armatus
MGP_PahariEiJ_G0022115	Tra2a	90	76.557	ENSMZEG00005009142	tra2a	90	78.388	Maylandia_zebra
MGP_PahariEiJ_G0022115	Tra2a	90	87.160	ENSMGAG00000010514	TRA2A	89	90.204	Meleagris_gallopavo
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSMICG00000043639	-	100	98.907	Microcebus_murinus
MGP_PahariEiJ_G0022115	Tra2a	100	76.950	ENSMICG00000036849	-	88	76.285	Microcebus_murinus
MGP_PahariEiJ_G0022115	Tra2a	70	81.407	ENSMOCG00000006467	-	97	82.915	Microtus_ochrogaster
MGP_PahariEiJ_G0022115	Tra2a	63	89.944	ENSMOCG00000010249	-	88	90.909	Microtus_ochrogaster
MGP_PahariEiJ_G0022115	Tra2a	87	78.629	ENSMMOG00000020174	tra2a	83	78.512	Mola_mola
MGP_PahariEiJ_G0022115	Tra2a	100	96.479	ENSMODG00000000807	TRA2A	100	96.479	Monodelphis_domestica
MGP_PahariEiJ_G0022115	Tra2a	85	75.769	ENSMALG00000020875	tra2a	90	76.277	Monopterus_albus
MGP_PahariEiJ_G0022115	Tra2a	100	99.645	ENSMUSG00000029817	Tra2a	100	99.645	Mus_musculus
MGP_PahariEiJ_G0022115	Tra2a	100	99.645	MGP_SPRETEiJ_G0029368	Tra2a	100	99.645	Mus_spretus
MGP_PahariEiJ_G0022115	Tra2a	100	97.535	ENSMPUG00000013480	TRA2A	100	97.535	Mustela_putorius_furo
MGP_PahariEiJ_G0022115	Tra2a	100	97.535	ENSMLUG00000013972	TRA2A	100	97.535	Myotis_lucifugus
MGP_PahariEiJ_G0022115	Tra2a	100	98.227	ENSNGAG00000023805	Tra2a	100	98.227	Nannospalax_galili
MGP_PahariEiJ_G0022115	Tra2a	55	89.610	ENSNBRG00000005992	tra2a	73	89.610	Neolamprologus_brichardi
MGP_PahariEiJ_G0022115	Tra2a	65	71.823	ENSNLEG00000029659	-	88	75.325	Nomascus_leucogenys
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSNLEG00000014794	TRA2A	100	98.907	Nomascus_leucogenys
MGP_PahariEiJ_G0022115	Tra2a	100	96.113	ENSMEUG00000001202	TRA2A	100	96.113	Notamacropus_eugenii
MGP_PahariEiJ_G0022115	Tra2a	100	96.831	ENSOPRG00000007606	TRA2A	100	96.831	Ochotona_princeps
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSODEG00000008335	TRA2A	100	98.239	Octodon_degus
MGP_PahariEiJ_G0022115	Tra2a	90	76.449	ENSONIG00000004503	tra2a	90	78.261	Oreochromis_niloticus
MGP_PahariEiJ_G0022115	Tra2a	90	86.434	ENSOANG00000014202	TRA2A	90	86.434	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSOCUG00000024139	TRA2A	100	97.887	Oryctolagus_cuniculus
MGP_PahariEiJ_G0022115	Tra2a	83	69.264	ENSORLG00000022191	tra2a	60	73.373	Oryzias_latipes
MGP_PahariEiJ_G0022115	Tra2a	83	68.831	ENSORLG00020003490	tra2a	60	72.781	Oryzias_latipes_hni
MGP_PahariEiJ_G0022115	Tra2a	83	68.398	ENSORLG00015015485	tra2a	60	72.189	Oryzias_latipes_hsok
MGP_PahariEiJ_G0022115	Tra2a	83	67.532	ENSOMEG00000017864	tra2a	60	71.006	Oryzias_melastigma
MGP_PahariEiJ_G0022115	Tra2a	99	95.390	ENSOGAG00000009733	TRA2A	99	95.390	Otolemur_garnettii
MGP_PahariEiJ_G0022115	Tra2a	100	91.166	ENSOARG00000002323	-	100	91.166	Ovis_aries
MGP_PahariEiJ_G0022115	Tra2a	100	96.831	ENSOARG00000013147	TRA2A	100	96.831	Ovis_aries
MGP_PahariEiJ_G0022115	Tra2a	99	98.221	ENSPPAG00000034382	TRA2A	99	98.889	Pan_paniscus
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSPPRG00000015216	TRA2A	100	97.887	Panthera_pardus
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSPTIG00000021114	TRA2A	100	97.887	Panthera_tigris_altaica
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSPTRG00000018988	TRA2A	100	98.907	Pan_troglodytes
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSPTRG00000046098	-	100	98.239	Pan_troglodytes
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSPANG00000014541	TRA2A	100	98.239	Papio_anubis
MGP_PahariEiJ_G0022115	Tra2a	90	76.753	ENSPKIG00000012298	tra2a	90	76.753	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022115	Tra2a	89	91.235	ENSPSIG00000014993	TRA2A	90	91.633	Pelodiscus_sinensis
MGP_PahariEiJ_G0022115	Tra2a	100	99.291	ENSPEMG00000008564	-	100	99.291	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022115	Tra2a	63	69.101	ENSPMAG00000007947	tra2a	59	68.862	Petromyzon_marinus
MGP_PahariEiJ_G0022115	Tra2a	100	96.479	ENSPCIG00000007917	TRA2A	100	96.479	Phascolarctos_cinereus
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSPPYG00000017728	TRA2A	100	98.239	Pongo_abelii
MGP_PahariEiJ_G0022115	Tra2a	99	97.865	ENSPCAG00000004148	TRA2A	100	97.865	Procavia_capensis
MGP_PahariEiJ_G0022115	Tra2a	100	83.803	ENSPCOG00000020465	TRA2A	100	83.803	Propithecus_coquereli
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSPVAG00000011298	TRA2A	100	98.239	Pteropus_vampyrus
MGP_PahariEiJ_G0022115	Tra2a	55	89.103	ENSPNYG00000020134	tra2a	76	90.385	Pundamilia_nyererei
MGP_PahariEiJ_G0022115	Tra2a	90	73.801	ENSPNAG00000000482	tra2a	90	74.170	Pygocentrus_nattereri
MGP_PahariEiJ_G0022115	Tra2a	100	99.645	ENSRNOG00000009156	Tra2a	100	99.645	Rattus_norvegicus
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSRROG00000030758	TRA2A	100	98.907	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022115	Tra2a	100	98.239	ENSSBOG00000031562	TRA2A	100	98.907	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022115	Tra2a	89	92.460	ENSSHAG00000005727	TRA2A	88	92.857	Sarcophilus_harrisii
MGP_PahariEiJ_G0022115	Tra2a	90	80.632	ENSSFOG00015014004	tra2a	90	75.277	Scleropages_formosus
MGP_PahariEiJ_G0022115	Tra2a	93	71.479	ENSSMAG00000014242	tra2a	90	71.795	Scophthalmus_maximus
MGP_PahariEiJ_G0022115	Tra2a	90	82.422	ENSSDUG00000005610	tra2a	89	85.156	Seriola_dumerili
MGP_PahariEiJ_G0022115	Tra2a	55	87.013	ENSSLDG00000025577	tra2a	81	87.013	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022115	Tra2a	79	100.000	ENSSARG00000012900	TRA2A	80	100.000	Sorex_araneus
MGP_PahariEiJ_G0022115	Tra2a	100	96.167	ENSSPUG00000006143	TRA2A	100	96.167	Sphenodon_punctatus
MGP_PahariEiJ_G0022115	Tra2a	90	73.626	ENSSPAG00000004184	tra2a	90	78.388	Stegastes_partitus
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSSSCG00000015387	TRA2A	100	97.887	Sus_scrofa
MGP_PahariEiJ_G0022115	Tra2a	61	88.953	ENSTGUG00000002795	TRA2A	62	88.166	Taeniopygia_guttata
MGP_PahariEiJ_G0022115	Tra2a	100	83.571	ENSTBEG00000013773	TRA2A	100	83.571	Tupaia_belangeri
MGP_PahariEiJ_G0022115	Tra2a	100	97.535	ENSTTRG00000008922	TRA2A	100	97.535	Tursiops_truncatus
MGP_PahariEiJ_G0022115	Tra2a	65	98.361	ENSUMAG00000001181	TRA2A	94	98.361	Ursus_maritimus
MGP_PahariEiJ_G0022115	Tra2a	100	83.803	ENSVPAG00000001829	TRA2A	100	83.803	Vicugna_pacos
MGP_PahariEiJ_G0022115	Tra2a	100	97.887	ENSVVUG00000001045	TRA2A	100	97.887	Vulpes_vulpes
MGP_PahariEiJ_G0022115	Tra2a	60	88.701	ENSXETG00000007397	tra2a	90	83.650	Xenopus_tropicalis