EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0022198 (Gene tree)
Gene ID
110316116
Gene Symbol
Smarcad1
Alias
D6Pas1|Etl1
Full Name
SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
61201 bases
Position
chr2:83163315-83224515
Accession
110316116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0050200ResIIIPF04851.155.4e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0050206-4172XM_021190211MGP_PahariEiJ_P0050206123 (aa)XP_021045870-
MGP_PahariEiJ_T0050207-634--- (aa)--
MGP_PahariEiJ_T0050204-474-MGP_PahariEiJ_P005020468 (aa)--
MGP_PahariEiJ_T0050205-726-MGP_PahariEiJ_P005020572 (aa)--
MGP_PahariEiJ_T0050202-586-MGP_PahariEiJ_P005020272 (aa)--
MGP_PahariEiJ_T0050203-719-MGP_PahariEiJ_P005020372 (aa)--
MGP_PahariEiJ_T0050200-5205-MGP_PahariEiJ_P00502001021 (aa)XP_021045869UPI000A31024F
MGP_PahariEiJ_T0050201-463--- (aa)--
MGP_PahariEiJ_T0050208-726-MGP_PahariEiJ_P005020845 (aa)--
MGP_PahariEiJ_T0050199-602-MGP_PahariEiJ_P0050199134 (aa)--
MGP_PahariEiJ_T0050209-640--- (aa)--
MGP_PahariEiJ_T0050210-2329--- (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0022198's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022198's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PahariEiJ_G0022198Smarcad15137.887MGP_PahariEiJ_G0014423Hells6637.887
MGP_PahariEiJ_G0022198Smarcad15030.297MGP_PahariEiJ_G0028657Rad54l6630.297
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0022198Smarcad110092.405ENSG00000163104SMARCAD110096.644Homo_sapiens
MGP_PahariEiJ_G0022198Smarcad16862.232ENSAPOG00000011446smarcad1a6562.232Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022198Smarcad110091.934ENSAMEG00000005844SMARCAD110091.934Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022198Smarcad16868.401ENSACIG00000018326smarcad1a10068.401Amphilophus_citrinellus
MGP_PahariEiJ_G0022198Smarcad110062.232ENSAOCG00000019762smarcad1a9762.232Amphiprion_ocellaris
MGP_PahariEiJ_G0022198Smarcad110062.375ENSAPEG00000003889smarcad1a9562.375Amphiprion_percula
MGP_PahariEiJ_G0022198Smarcad17667.788ENSATEG00000015608smarcad1a8367.788Anabas_testudineus
MGP_PahariEiJ_G0022198Smarcad19471.606ENSAPLG00000004630SMARCAD110071.710Anas_platyrhynchos
MGP_PahariEiJ_G0022198Smarcad110069.328ENSACAG00000013554SMARCAD110069.844Anolis_carolinensis
MGP_PahariEiJ_G0022198Smarcad110092.128ENSANAG00000020488SMARCAD19993.245Aotus_nancymaae
MGP_PahariEiJ_G0022198Smarcad16366.147ENSACLG00000017063smarcad1a6266.147Astatotilapia_calliptera
MGP_PahariEiJ_G0022198Smarcad17758.600ENSAMXG00000019130smarcad1b8957.964Astyanax_mexicanus
MGP_PahariEiJ_G0022198Smarcad17061.376ENSAMXG00000015470smarcad1a9861.376Astyanax_mexicanus
MGP_PahariEiJ_G0022198Smarcad110091.068ENSBTAG00000017061SMARCAD110091.068Bos_taurus
MGP_PahariEiJ_G0022198Smarcad110092.593ENSCJAG00000006778SMARCAD110092.593Callithrix_jacchus
MGP_PahariEiJ_G0022198Smarcad110091.545ENSCAFG00000010026SMARCAD110091.448Canis_familiaris
MGP_PahariEiJ_G0022198Smarcad18693.213ENSCAFG00020003994SMARCAD19993.213Canis_lupus_dingo
MGP_PahariEiJ_G0022198Smarcad110091.351ENSCHIG00000012905SMARCAD110091.351Capra_hircus
MGP_PahariEiJ_G0022198Smarcad110092.412ENSTSYG00000002706SMARCAD110092.412Carlito_syrichta
MGP_PahariEiJ_G0022198Smarcad19075.215ENSCAPG00000016744SMARCAD19676.293Cavia_aperea
MGP_PahariEiJ_G0022198Smarcad110090.997ENSCPOG00000011398SMARCAD110090.997Cavia_porcellus
MGP_PahariEiJ_G0022198Smarcad110092.405ENSCCAG00000022264SMARCAD110096.644Cebus_capucinus
MGP_PahariEiJ_G0022198Smarcad110092.795ENSCATG00000035663SMARCAD19993.905Cercocebus_atys
MGP_PahariEiJ_G0022198Smarcad18293.810ENSCSAG00000004186SMARCAD110093.810Chlorocebus_sabaeus
MGP_PahariEiJ_G0022198Smarcad110072.249ENSCPBG00000013203SMARCAD110072.622Chrysemys_picta_bellii
MGP_PahariEiJ_G0022198Smarcad16449.399ENSCING00000001688-9949.399Ciona_intestinalis
MGP_PahariEiJ_G0022198Smarcad110092.697ENSCANG00000003556SMARCAD110096.644Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022198Smarcad110094.727ENSCGRG00001015056Smarcad110094.727Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022198Smarcad110094.727ENSCGRG00000014087Smarcad110094.727Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022198Smarcad16662.649ENSCSEG00000017903smarcad1a10046.387Cynoglossus_semilaevis
MGP_PahariEiJ_G0022198Smarcad110062.054ENSCSEG00000014419-9162.054Cynoglossus_semilaevis
MGP_PahariEiJ_G0022198Smarcad18056.348ENSDARG00000073721smarcad1b8556.627Danio_rerio
MGP_PahariEiJ_G0022198Smarcad16364.632ENSDARG00000014041smarcad1a9254.906Danio_rerio
MGP_PahariEiJ_G0022198Smarcad110091.626ENSDNOG00000000806-10091.626Dasypus_novemcinctus
MGP_PahariEiJ_G0022198Smarcad110089.213ENSDORG00000012331Smarcad110089.213Dipodomys_ordii
MGP_PahariEiJ_G0022198Smarcad16345.692FBgn0032157Etl18044.575Drosophila_melanogaster
MGP_PahariEiJ_G0022198Smarcad16146.022ENSEBUG00000003969smarcad1a9646.191Eptatretus_burgeri
MGP_PahariEiJ_G0022198Smarcad110091.837ENSEASG00005012382SMARCAD110091.837Equus_asinus_asinus
MGP_PahariEiJ_G0022198Smarcad110091.837ENSECAG00000011562SMARCAD110091.837Equus_caballus
MGP_PahariEiJ_G0022198Smarcad110050.838ENSELUG00000018535smarcad1a10050.419Esox_lucius
MGP_PahariEiJ_G0022198Smarcad17956.569ENSELUG00000019154smarcad1b8356.569Esox_lucius
MGP_PahariEiJ_G0022198Smarcad110091.440ENSFCAG00000003958SMARCAD110096.644Felis_catus
MGP_PahariEiJ_G0022198Smarcad110066.667ENSFALG00000006089SMARCAD110066.667Ficedula_albicollis
MGP_PahariEiJ_G0022198Smarcad110092.008ENSFDAG00000017027SMARCAD110092.008Fukomys_damarensis
MGP_PahariEiJ_G0022198Smarcad19465.022ENSFHEG00000012778smarcad1a8564.118Fundulus_heteroclitus
MGP_PahariEiJ_G0022198Smarcad18456.961ENSGMOG00000018995smarcad1a9757.706Gadus_morhua
MGP_PahariEiJ_G0022198Smarcad18070.925ENSGALG00000037339SMARCAD19967.531Gallus_gallus
MGP_PahariEiJ_G0022198Smarcad19066.193ENSGAFG00000013498smarcad1a10046.305Gambusia_affinis
MGP_PahariEiJ_G0022198Smarcad18558.171ENSGACG00000007327smarcad1a9958.171Gasterosteus_aculeatus
MGP_PahariEiJ_G0022198Smarcad110072.657ENSGAGG00000008582SMARCAD110072.850Gopherus_agassizii
MGP_PahariEiJ_G0022198Smarcad110092.502ENSGGOG00000023001SMARCAD110092.502Gorilla_gorilla
MGP_PahariEiJ_G0022198Smarcad16365.991ENSHBUG00000011042smarcad1a6065.991Haplochromis_burtoni
MGP_PahariEiJ_G0022198Smarcad110092.039ENSHGLG00000005070SMARCAD110092.039Heterocephalus_glaber_female
MGP_PahariEiJ_G0022198Smarcad110092.039ENSHGLG00100006812SMARCAD110092.039Heterocephalus_glaber_male
MGP_PahariEiJ_G0022198Smarcad19963.919ENSHCOG00000007848smarcad1a8762.332Hippocampus_comes
MGP_PahariEiJ_G0022198Smarcad18157.074ENSIPUG00000022817smarcad1b8957.554Ictalurus_punctatus
MGP_PahariEiJ_G0022198Smarcad17864.945ENSIPUG00000000242smarcad1a9551.554Ictalurus_punctatus
MGP_PahariEiJ_G0022198Smarcad110092.412ENSSTOG00000001227SMARCAD110092.412Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022198Smarcad110093.087ENSJJAG00000022342Smarcad110093.087Jaculus_jaculus
MGP_PahariEiJ_G0022198Smarcad16463.897ENSKMAG00000021351smarcad1a6363.447Kryptolebias_marmoratus
MGP_PahariEiJ_G0022198Smarcad19764.040ENSLBEG00000008088smarcad1a9464.040Labrus_bergylta
MGP_PahariEiJ_G0022198Smarcad110053.416ENSLOCG00000012909smarcad1a10054.870Lepisosteus_oculatus
MGP_PahariEiJ_G0022198Smarcad110090.068ENSLAFG00000000040SMARCAD110090.068Loxodonta_africana
MGP_PahariEiJ_G0022198Smarcad110092.697ENSMFAG00000042606SMARCAD19993.792Macaca_fascicularis
MGP_PahariEiJ_G0022198Smarcad18693.792ENSMMUG00000022242SMARCAD19993.792Macaca_mulatta
MGP_PahariEiJ_G0022198Smarcad110092.600ENSMNEG00000038117SMARCAD110096.477Macaca_nemestrina
MGP_PahariEiJ_G0022198Smarcad110092.795ENSMLEG00000038333SMARCAD110096.644Mandrillus_leucophaeus
MGP_PahariEiJ_G0022198Smarcad16962.953ENSMAMG00000000933smarcad1a6862.953Mastacembelus_armatus
MGP_PahariEiJ_G0022198Smarcad16366.147ENSMZEG00005005203smarcad1a6266.147Maylandia_zebra
MGP_PahariEiJ_G0022198Smarcad19464.190ENSMGAG00000005577SMARCAD110064.190Meleagris_gallopavo
MGP_PahariEiJ_G0022198Smarcad110094.824ENSMAUG00000008417Smarcad110094.824Mesocricetus_auratus
MGP_PahariEiJ_G0022198Smarcad110091.553ENSMICG00000009746SMARCAD110091.553Microcebus_murinus
MGP_PahariEiJ_G0022198Smarcad110094.434ENSMOCG00000017142Smarcad110094.434Microtus_ochrogaster
MGP_PahariEiJ_G0022198Smarcad17658.428ENSMMOG00000000275smarcad1a9758.428Mola_mola
MGP_PahariEiJ_G0022198Smarcad110079.344ENSMODG00000019268SMARCAD110079.344Monodelphis_domestica
MGP_PahariEiJ_G0022198Smarcad19599.051MGP_CAROLIEiJ_G0028458-7799.051Mus_caroli
MGP_PahariEiJ_G0022198Smarcad110098.629ENSMUSG00000029920Smarcad110098.629Mus_musculus
MGP_PahariEiJ_G0022198Smarcad110098.531MGP_SPRETEiJ_G0029462Smarcad110098.531Mus_spretus
MGP_PahariEiJ_G0022198Smarcad110091.740ENSMPUG00000002111SMARCAD110091.740Mustela_putorius_furo
MGP_PahariEiJ_G0022198Smarcad110089.213ENSMLUG00000000425SMARCAD110089.213Myotis_lucifugus
MGP_PahariEiJ_G0022198Smarcad110092.203ENSNGAG00000000810Smarcad110092.203Nannospalax_galili
MGP_PahariEiJ_G0022198Smarcad16166.346ENSNBRG00000012749smarcad1a7466.346Neolamprologus_brichardi
MGP_PahariEiJ_G0022198Smarcad110092.502ENSNLEG00000014225SMARCAD110096.644Nomascus_leucogenys
MGP_PahariEiJ_G0022198Smarcad110091.553ENSODEG00000004334SMARCAD110091.456Octodon_degus
MGP_PahariEiJ_G0022198Smarcad110052.128ENSONIG00000015059smarcad1a10052.478Oreochromis_niloticus
MGP_PahariEiJ_G0022198Smarcad18082.367ENSOANG00000013764SMARCAD110082.488Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022198Smarcad110092.885ENSOCUG00000017283SMARCAD110092.885Oryctolagus_cuniculus
MGP_PahariEiJ_G0022198Smarcad16366.615ENSORLG00000004869smarcad1a6464.095Oryzias_latipes
MGP_PahariEiJ_G0022198Smarcad16366.459ENSORLG00020020569smarcad1a10047.778Oryzias_latipes_hni
MGP_PahariEiJ_G0022198Smarcad16366.303ENSORLG00015009045smarcad1a10047.963Oryzias_latipes_hsok
MGP_PahariEiJ_G0022198Smarcad16564.812ENSOMEG00000023032smarcad1a6960.685Oryzias_melastigma
MGP_PahariEiJ_G0022198Smarcad110091.351ENSOGAG00000011444SMARCAD110091.351Otolemur_garnettii
MGP_PahariEiJ_G0022198Smarcad110091.448ENSOARG00000017851SMARCAD110091.448Ovis_aries
MGP_PahariEiJ_G0022198Smarcad110092.600ENSPPAG00000035715SMARCAD110092.600Pan_paniscus
MGP_PahariEiJ_G0022198Smarcad110091.440ENSPPRG00000024756SMARCAD110096.644Panthera_pardus
MGP_PahariEiJ_G0022198Smarcad110091.262ENSPTIG00000017868SMARCAD110091.262Panthera_tigris_altaica
MGP_PahariEiJ_G0022198Smarcad110092.502ENSPTRG00000023126SMARCAD110096.644Pan_troglodytes
MGP_PahariEiJ_G0022198Smarcad110091.650ENSPANG00000019757SMARCAD110091.650Papio_anubis
MGP_PahariEiJ_G0022198Smarcad110071.593ENSPSIG00000010255SMARCAD110071.593Pelodiscus_sinensis
MGP_PahariEiJ_G0022198Smarcad16364.230ENSPMGG00000010735smarcad1a9562.556Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0022198Smarcad110080.333ENSPEMG00000001854Smarcad110080.333Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022198Smarcad19947.408ENSPMAG00000003516smarcad1a9947.755Petromyzon_marinus
MGP_PahariEiJ_G0022198Smarcad17785.588ENSPCIG00000008137SMARCAD19886.813Phascolarctos_cinereus
MGP_PahariEiJ_G0022198Smarcad19166.147ENSPFOG00000019116smarcad1a7166.147Poecilia_formosa
MGP_PahariEiJ_G0022198Smarcad17665.991ENSPLAG00000000108smarcad1a7165.991Poecilia_latipinna
MGP_PahariEiJ_G0022198Smarcad17666.147ENSPMEG00000009155smarcad1a7166.147Poecilia_mexicana
MGP_PahariEiJ_G0022198Smarcad19166.615ENSPREG00000018185smarcad1a8366.615Poecilia_reticulata
MGP_PahariEiJ_G0022198Smarcad110091.926ENSPPYG00000014935SMARCAD110091.926Pongo_abelii
MGP_PahariEiJ_G0022198Smarcad17393.115ENSPCOG00000020478SMARCAD18993.115Propithecus_coquereli
MGP_PahariEiJ_G0022198Smarcad110090.097ENSPVAG00000001760SMARCAD110090.097Pteropus_vampyrus
MGP_PahariEiJ_G0022198Smarcad16165.865ENSPNYG00000010087smarcad1a8560.000Pundamilia_nyererei
MGP_PahariEiJ_G0022198Smarcad17858.323ENSPNAG00000010099smarcad1b8657.966Pygocentrus_nattereri
MGP_PahariEiJ_G0022198Smarcad110050.519ENSPNAG00000001663smarcad1a10050.566Pygocentrus_nattereri
MGP_PahariEiJ_G0022198Smarcad110097.363ENSRNOG00000006391Smarcad110097.363Rattus_norvegicus
MGP_PahariEiJ_G0022198Smarcad110092.600ENSRBIG00000041989SMARCAD110092.600Rhinopithecus_bieti
MGP_PahariEiJ_G0022198Smarcad110092.600ENSRROG00000035309SMARCAD110092.600Rhinopithecus_roxellana
MGP_PahariEiJ_G0022198Smarcad110092.405ENSSBOG00000032114SMARCAD110096.644Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022198Smarcad110080.502ENSSHAG00000001279SMARCAD110080.405Sarcophilus_harrisii
MGP_PahariEiJ_G0022198Smarcad18455.912ENSSFOG00015016814smarcad1b10050.326Scleropages_formosus
MGP_PahariEiJ_G0022198Smarcad17557.403ENSSFOG00015020909smarcad1a10057.403Scleropages_formosus
MGP_PahariEiJ_G0022198Smarcad19763.897ENSSMAG00000001326smarcad1a9563.897Scophthalmus_maximus
MGP_PahariEiJ_G0022198Smarcad16862.841ENSSDUG00000022338smarcad1a8262.841Seriola_dumerili
MGP_PahariEiJ_G0022198Smarcad19762.069ENSSLDG00000024986smarcad1a9562.069Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022198Smarcad15884.087ENSSPUG00000004633SMARCAD110084.087Sphenodon_punctatus
MGP_PahariEiJ_G0022198Smarcad19663.037ENSSPAG00000001970smarcad1a9959.973Stegastes_partitus
MGP_PahariEiJ_G0022198Smarcad110091.837ENSSSCG00000009193SMARCAD110093.103Sus_scrofa
MGP_PahariEiJ_G0022198Smarcad17676.493ENSTGUG00000003127SMARCAD110076.747Taeniopygia_guttata
MGP_PahariEiJ_G0022198Smarcad18457.471ENSTNIG00000017585smarcad1a9957.471Tetraodon_nigroviridis
MGP_PahariEiJ_G0022198Smarcad19096.627ENSTBEG00000002789SMARCAD19196.627Tupaia_belangeri
MGP_PahariEiJ_G0022198Smarcad19890.377ENSTTRG00000000226SMARCAD110089.980Tursiops_truncatus
MGP_PahariEiJ_G0022198Smarcad110091.934ENSUAMG00000022262SMARCAD19993.127Ursus_americanus
MGP_PahariEiJ_G0022198Smarcad110091.926ENSUMAG00000004549SMARCAD110091.926Ursus_maritimus
MGP_PahariEiJ_G0022198Smarcad110091.740ENSVVUG00000007271SMARCAD110093.222Vulpes_vulpes
MGP_PahariEiJ_G0022198Smarcad18465.450ENSXETG00000019214smarcad110065.450Xenopus_tropicalis
MGP_PahariEiJ_G0022198Smarcad18353.357ENSXCOG00000005232smarcad1a9453.357Xiphophorus_couchianus
MGP_PahariEiJ_G0022198Smarcad16365.835ENSXMAG00000015350smarcad1a5865.835Xiphophorus_maculatus

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