EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0022230 (Gene tree)
Gene ID
110315950
Gene Symbol
Polr1a
Alias
194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1
Full Name
RNA polymerase I subunit A
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
68584 bases
Position
chr2:89850624-89919207
Accession
110315950
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0050352RNA_pol_Rpb1_5PF04998.179.1e-10311
MGP_PahariEiJ_P0050352RNA_pol_Rpb1_4PF05000.172e-2511
MGP_PahariEiJ_P0050352RNA_pol_Rpb1_2PF00623.202e-6911
MGP_PahariEiJ_P0050352RNA_pol_Rpb1_3PF04983.187.6e-3711
MGP_PahariEiJ_P0050352RNA_pol_Rpb1_1PF04997.124e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0050360-3958-MGP_PahariEiJ_P0050360741 (aa)--
MGP_PahariEiJ_T0050354-3302--- (aa)--
MGP_PahariEiJ_T0050355-352--- (aa)--
MGP_PahariEiJ_T0050356-345--- (aa)--
MGP_PahariEiJ_T0050357-582--- (aa)--
MGP_PahariEiJ_T0050351-3381-MGP_PahariEiJ_P0050351282 (aa)--
MGP_PahariEiJ_T0050352-9187-MGP_PahariEiJ_P00503521716 (aa)XP_021045609UPI000A310AD5
MGP_PahariEiJ_T0050353-1420--- (aa)--
MGP_PahariEiJ_T0050358-625-MGP_PahariEiJ_P005035847 (aa)--
MGP_PahariEiJ_T0050359-568--- (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0022230's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022230's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PahariEiJ_G0022230Polr1a7233.333MGP_PahariEiJ_G0017718Polr2a6033.333
MGP_PahariEiJ_G0022230Polr1a6832.511MGP_PahariEiJ_G0030029Polr3a6932.834
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0022230Polr1a10085.987ENSG00000068654POLR1A10086.335Homo_sapiens
MGP_PahariEiJ_G0022230Polr1a9953.214ENSAPOG00000017945polr1a9967.393Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022230Polr1a10087.348ENSAMEG00000005807POLR1A10089.447Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022230Polr1a9667.358ENSACIG00000022147polr1a10066.874Amphilophus_citrinellus
MGP_PahariEiJ_G0022230Polr1a10065.663ENSAOCG00000017336polr1a10067.857Amphiprion_ocellaris
MGP_PahariEiJ_G0022230Polr1a10065.605ENSAPEG00000016105polr1a9771.528Amphiprion_percula
MGP_PahariEiJ_G0022230Polr1a10065.569ENSATEG00000016773polr1a10065.840Anabas_testudineus
MGP_PahariEiJ_G0022230Polr1a9966.133ENSAPLG00000013871POLR1A9972.622Anas_platyrhynchos
MGP_PahariEiJ_G0022230Polr1a9969.043ENSACAG00000012141POLR1A9968.384Anolis_carolinensis
MGP_PahariEiJ_G0022230Polr1a10086.037ENSANAG00000033927POLR1A10086.211Aotus_nancymaae
MGP_PahariEiJ_G0022230Polr1a10062.045ENSACLG00000020541polr1a10061.525Astatotilapia_calliptera
MGP_PahariEiJ_G0022230Polr1a5561.836ENSAMXG00000011553-9465.583Astyanax_mexicanus
MGP_PahariEiJ_G0022230Polr1a8457.983ENSAMXG00000011559-8457.983Astyanax_mexicanus
MGP_PahariEiJ_G0022230Polr1a10087.007ENSBTAG00000006481POLR1A10087.007Bos_taurus
MGP_PahariEiJ_G0022230Polr1a9940.079WBGene00012999rpoa-19838.367Caenorhabditis_elegans
MGP_PahariEiJ_G0022230Polr1a10085.235ENSCJAG00000019547POLR1A10085.582Callithrix_jacchus
MGP_PahariEiJ_G0022230Polr1a10086.667ENSCAFG00000007613POLR1A10086.841Canis_familiaris
MGP_PahariEiJ_G0022230Polr1a10086.899ENSCAFG00020014752POLR1A10087.072Canis_lupus_dingo
MGP_PahariEiJ_G0022230Polr1a10086.480ENSCHIG00000018204POLR1A10086.189Capra_hircus
MGP_PahariEiJ_G0022230Polr1a10085.490ENSTSYG00000002761POLR1A10085.839Carlito_syrichta
MGP_PahariEiJ_G0022230Polr1a9783.204ENSCAPG00000010132POLR1A10083.373Cavia_aperea
MGP_PahariEiJ_G0022230Polr1a10087.776ENSCPOG00000012350POLR1A10087.951Cavia_porcellus
MGP_PahariEiJ_G0022230Polr1a10085.871ENSCCAG00000019839POLR1A10086.219Cebus_capucinus
MGP_PahariEiJ_G0022230Polr1a10086.450ENSCATG00000029786POLR1A10086.798Cercocebus_atys
MGP_PahariEiJ_G0022230Polr1a10087.914ENSCLAG00000005187POLR1A10087.856Chinchilla_lanigera
MGP_PahariEiJ_G0022230Polr1a10086.393ENSCSAG00000016251POLR1A10086.740Chlorocebus_sabaeus
MGP_PahariEiJ_G0022230Polr1a9974.910ENSCHOG00000003766-8492.941Choloepus_hoffmanni
MGP_PahariEiJ_G0022230Polr1a9974.289ENSCPBG00000001115POLR1A9974.519Chrysemys_picta_bellii
MGP_PahariEiJ_G0022230Polr1a9943.307ENSCING00000007684-9942.674Ciona_intestinalis
MGP_PahariEiJ_G0022230Polr1a8975.641ENSCSAVG00000007184-9947.795Ciona_savignyi
MGP_PahariEiJ_G0022230Polr1a10083.796ENSCANG00000031785POLR1A10083.738Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022230Polr1a10091.117ENSCGRG00001006651Polr1a10088.359Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022230Polr1a10091.117ENSCGRG00000010834Polr1a10092.878Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022230Polr1a9991.039ENSCGRG00000007004-9791.071Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022230Polr1a10061.919ENSCSEG00000020190polr1a10061.324Cynoglossus_semilaevis
MGP_PahariEiJ_G0022230Polr1a10063.621ENSCVAG00000020941polr1a10063.668Cyprinodon_variegatus
MGP_PahariEiJ_G0022230Polr1a10065.993ENSDARG00000098375polr1a10066.202Danio_rerio
MGP_PahariEiJ_G0022230Polr1a10080.626ENSDNOG00000010829POLR1A10080.974Dasypus_novemcinctus
MGP_PahariEiJ_G0022230Polr1a10087.775ENSDORG00000008298Polr1a10088.123Dipodomys_ordii
MGP_PahariEiJ_G0022230Polr1a7944.404FBgn0019938RpI19942.890Drosophila_melanogaster
MGP_PahariEiJ_G0022230Polr1a9981.004ENSETEG00000000412-7296.875Echinops_telfairi
MGP_PahariEiJ_G0022230Polr1a8165.891ENSEBUG00000005667-9947.055Eptatretus_burgeri
MGP_PahariEiJ_G0022230Polr1a10087.261ENSEASG00005001625POLR1A10087.666Equus_asinus_asinus
MGP_PahariEiJ_G0022230Polr1a10087.145ENSECAG00000010092POLR1A10089.370Equus_caballus
MGP_PahariEiJ_G0022230Polr1a10087.145ENSECAG00000030510-10089.370Equus_caballus
MGP_PahariEiJ_G0022230Polr1a10087.145ENSECAG00000036306-10089.370Equus_caballus
MGP_PahariEiJ_G0022230Polr1a8593.617ENSEEUG00000000676POLR1A8593.333Erinaceus_europaeus
MGP_PahariEiJ_G0022230Polr1a10066.454ENSELUG00000012769polr1a9966.802Esox_lucius
MGP_PahariEiJ_G0022230Polr1a10086.667ENSFCAG00000008966POLR1A10086.841Felis_catus
MGP_PahariEiJ_G0022230Polr1a9971.034ENSFALG00000010082POLR1A9971.504Ficedula_albicollis
MGP_PahariEiJ_G0022230Polr1a10088.074ENSFDAG00000013726POLR1A10088.191Fukomys_damarensis
MGP_PahariEiJ_G0022230Polr1a10061.333ENSFHEG00000005996polr1a10060.751Fundulus_heteroclitus
MGP_PahariEiJ_G0022230Polr1a10060.070ENSGMOG00000002230polr1a10059.988Gadus_morhua
MGP_PahariEiJ_G0022230Polr1a9962.143ENSGALG00000038160-9969.380Gallus_gallus
MGP_PahariEiJ_G0022230Polr1a10064.207ENSGAFG00000015266polr1a10064.364Gambusia_affinis
MGP_PahariEiJ_G0022230Polr1a10064.129ENSGACG00000018791polr1a10064.113Gasterosteus_aculeatus
MGP_PahariEiJ_G0022230Polr1a9968.365ENSGAGG00000004984-9680.402Gopherus_agassizii
MGP_PahariEiJ_G0022230Polr1a7962.946ENSGAGG00000020105-8062.946Gopherus_agassizii
MGP_PahariEiJ_G0022230Polr1a10086.045ENSGGOG00000001788POLR1A10086.393Gorilla_gorilla
MGP_PahariEiJ_G0022230Polr1a9064.060ENSHBUG00000020021polr1a9870.468Haplochromis_burtoni
MGP_PahariEiJ_G0022230Polr1a10088.417ENSHGLG00000006334POLR1A10088.824Heterocephalus_glaber_female
MGP_PahariEiJ_G0022230Polr1a10088.160ENSHGLG00100006614POLR1A10088.566Heterocephalus_glaber_male
MGP_PahariEiJ_G0022230Polr1a10062.001ENSHCOG00000003345polr1a10061.694Hippocampus_comes
MGP_PahariEiJ_G0022230Polr1a10066.107ENSIPUG00000013174polr1a10065.623Ictalurus_punctatus
MGP_PahariEiJ_G0022230Polr1a10086.189ENSSTOG00000012580POLR1A10086.364Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022230Polr1a10089.070ENSJJAG00000013113Polr1a10089.244Jaculus_jaculus
MGP_PahariEiJ_G0022230Polr1a10065.099ENSKMAG00000007399polr1a10064.750Kryptolebias_marmoratus
MGP_PahariEiJ_G0022230Polr1a9468.354ENSLBEG00000015401polr1a9967.810Labrus_bergylta
MGP_PahariEiJ_G0022230Polr1a9963.309ENSLACG00000003218polr1a9976.009Latimeria_chalumnae
MGP_PahariEiJ_G0022230Polr1a10070.157ENSLOCG00000010881polr1a10070.284Lepisosteus_oculatus
MGP_PahariEiJ_G0022230Polr1a10086.620ENSLAFG00000014948POLR1A10086.620Loxodonta_africana
MGP_PahariEiJ_G0022230Polr1a10086.393ENSMFAG00000046097POLR1A10086.508Macaca_fascicularis
MGP_PahariEiJ_G0022230Polr1a10086.393ENSMMUG00000015815POLR1A10086.740Macaca_mulatta
MGP_PahariEiJ_G0022230Polr1a10086.393ENSMNEG00000043313POLR1A10086.740Macaca_nemestrina
MGP_PahariEiJ_G0022230Polr1a10085.814ENSMLEG00000042428POLR1A10086.161Mandrillus_leucophaeus
MGP_PahariEiJ_G0022230Polr1a10065.278ENSMAMG00000016565polr1a10065.970Mastacembelus_armatus
MGP_PahariEiJ_G0022230Polr1a10065.338ENSMZEG00005004915polr1a10064.818Maylandia_zebra
MGP_PahariEiJ_G0022230Polr1a9968.739ENSMGAG00000013111POLR1A9968.797Meleagris_gallopavo
MGP_PahariEiJ_G0022230Polr1a10090.566ENSMAUG00000008497Polr1a10093.643Mesocricetus_auratus
MGP_PahariEiJ_G0022230Polr1a10086.632ENSMICG00000000757POLR1A10086.748Microcebus_murinus
MGP_PahariEiJ_G0022230Polr1a10093.128ENSMOCG00000000122Polr1a10093.477Microtus_ochrogaster
MGP_PahariEiJ_G0022230Polr1a10064.747ENSMMOG00000010216polr1a10064.505Mola_mola
MGP_PahariEiJ_G0022230Polr1a10074.255ENSMODG00000009335POLR1A10074.025Monodelphis_domestica
MGP_PahariEiJ_G0022230Polr1a10064.965ENSMALG00000013363polr1a10065.067Monopterus_albus
MGP_PahariEiJ_G0022230Polr1a10095.050MGP_CAROLIEiJ_G0028494Polr1a10095.050Mus_caroli
MGP_PahariEiJ_G0022230Polr1a10094.991ENSMUSG00000049553Polr1a10095.108Mus_musculus
MGP_PahariEiJ_G0022230Polr1a10093.540MGP_SPRETEiJ_G0029499Polr1a10094.482Mus_spretus
MGP_PahariEiJ_G0022230Polr1a10087.014ENSMPUG00000009135POLR1A10087.188Mustela_putorius_furo
MGP_PahariEiJ_G0022230Polr1a10086.277ENSMLUG00000015723POLR1A10086.450Myotis_lucifugus
MGP_PahariEiJ_G0022230Polr1a10090.512ENSNGAG00000017907Polr1a10090.920Nannospalax_galili
MGP_PahariEiJ_G0022230Polr1a10065.409ENSNBRG00000000519polr1a10064.934Neolamprologus_brichardi
MGP_PahariEiJ_G0022230Polr1a10084.265ENSNLEG00000002264POLR1A10084.496Nomascus_leucogenys
MGP_PahariEiJ_G0022230Polr1a7591.339ENSMEUG00000011665-7591.339Notamacropus_eugenii
MGP_PahariEiJ_G0022230Polr1a9981.143ENSOPRG00000008269POLR1A10081.143Ochotona_princeps
MGP_PahariEiJ_G0022230Polr1a10088.074ENSODEG00000003542POLR1A10088.482Octodon_degus
MGP_PahariEiJ_G0022230Polr1a10065.990ENSONIG00000015895polr1a10065.057Oreochromis_niloticus
MGP_PahariEiJ_G0022230Polr1a6566.468ENSOANG00000000237-10067.683Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022230Polr1a9069.685ENSOANG00000012384-9971.331Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022230Polr1a10087.791ENSOCUG00000010138POLR1A10087.907Oryctolagus_cuniculus
MGP_PahariEiJ_G0022230Polr1a10064.348ENSORLG00000008753polr1a9964.327Oryzias_latipes
MGP_PahariEiJ_G0022230Polr1a10063.384ENSORLG00020020726polr1a9962.910Oryzias_latipes_hni
MGP_PahariEiJ_G0022230Polr1a9673.404ENSORLG00015016071polr1a9973.333Oryzias_latipes_hsok
MGP_PahariEiJ_G0022230Polr1a8259.740ENSOMEG00000019264-10049.843Oryzias_melastigma
MGP_PahariEiJ_G0022230Polr1a5658.894ENSOMEG00000019310-9463.065Oryzias_melastigma
MGP_PahariEiJ_G0022230Polr1a10087.435ENSOGAG00000004031POLR1A10087.087Otolemur_garnettii
MGP_PahariEiJ_G0022230Polr1a10085.362ENSOARG00000020601POLR1A10086.382Ovis_aries
MGP_PahariEiJ_G0022230Polr1a10085.871ENSPPAG00000042450POLR1A10086.219Pan_paniscus
MGP_PahariEiJ_G0022230Polr1a10086.783ENSPPRG00000006702POLR1A10086.957Panthera_pardus
MGP_PahariEiJ_G0022230Polr1a10086.308ENSPTIG00000018783POLR1A10086.482Panthera_tigris_altaica
MGP_PahariEiJ_G0022230Polr1a10086.103ENSPTRG00000012147POLR1A10086.161Pan_troglodytes
MGP_PahariEiJ_G0022230Polr1a10086.450ENSPANG00000025908POLR1A10086.798Papio_anubis
MGP_PahariEiJ_G0022230Polr1a9475.000ENSPKIG00000005468polr1a9975.000Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022230Polr1a9967.517ENSPSIG00000009321-9971.826Pelodiscus_sinensis
MGP_PahariEiJ_G0022230Polr1a9047.826ENSPMGG00000009718polr1a9568.259Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0022230Polr1a10093.772ENSPEMG00000022224Polr1a10093.946Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022230Polr1a9578.401ENSPCIG00000004222POLR1A9978.523Phascolarctos_cinereus
MGP_PahariEiJ_G0022230Polr1a10063.979ENSPFOG00000005025polr1a10064.037Poecilia_formosa
MGP_PahariEiJ_G0022230Polr1a10064.360ENSPLAG00000021389polr1a10064.360Poecilia_latipinna
MGP_PahariEiJ_G0022230Polr1a10062.109ENSPMEG00000006463polr1a10062.514Poecilia_mexicana
MGP_PahariEiJ_G0022230Polr1a10064.368ENSPREG00000002389polr1a10063.065Poecilia_reticulata
MGP_PahariEiJ_G0022230Polr1a10085.582ENSPPYG00000012217POLR1A10085.929Pongo_abelii
MGP_PahariEiJ_G0022230Polr1a9288.000ENSPCAG00000011582POLR1A9181.182Procavia_capensis
MGP_PahariEiJ_G0022230Polr1a10086.863ENSPCOG00000026987POLR1A10087.037Propithecus_coquereli
MGP_PahariEiJ_G0022230Polr1a10082.470ENSPVAG00000012674POLR1A9584.791Pteropus_vampyrus
MGP_PahariEiJ_G0022230Polr1a10065.338ENSPNYG00000000026polr1a10064.818Pundamilia_nyererei
MGP_PahariEiJ_G0022230Polr1a10066.801ENSPNAG00000019223polr1a9969.125Pygocentrus_nattereri
MGP_PahariEiJ_G0022230Polr1a10095.513ENSRNOG00000009545Polr1a10095.513Rattus_norvegicus
MGP_PahariEiJ_G0022230Polr1a10086.045ENSRBIG00000028335POLR1A10086.161Rhinopithecus_bieti
MGP_PahariEiJ_G0022230Polr1a10085.987ENSRROG00000031473POLR1A10086.103Rhinopithecus_roxellana
MGP_PahariEiJ_G0022230Polr1a9936.893YOR341WRPA1909936.815Saccharomyces_cerevisiae
MGP_PahariEiJ_G0022230Polr1a10085.656ENSSBOG00000030262POLR1A10086.003Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022230Polr1a10073.064ENSSHAG00000014739POLR1A10073.064Sarcophilus_harrisii
MGP_PahariEiJ_G0022230Polr1a10067.228ENSSFOG00015019716polr1a10067.187Scleropages_formosus
MGP_PahariEiJ_G0022230Polr1a10065.411ENSSMAG00000014342polr1a10065.006Scophthalmus_maximus
MGP_PahariEiJ_G0022230Polr1a10066.300ENSSDUG00000014631polr1a10065.782Seriola_dumerili
MGP_PahariEiJ_G0022230Polr1a10064.555ENSSLDG00000024095polr1a10063.783Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022230Polr1a7593.617ENSSARG00000003136-7493.617Sorex_araneus
MGP_PahariEiJ_G0022230Polr1a9577.436ENSSPUG00000004215POLR1A9877.436Sphenodon_punctatus
MGP_PahariEiJ_G0022230Polr1a9947.687ENSSPAG00000016341polr1a9472.336Stegastes_partitus
MGP_PahariEiJ_G0022230Polr1a9984.229ENSSSCG00000008226POLR1A9988.515Sus_scrofa
MGP_PahariEiJ_G0022230Polr1a9970.324ENSTGUG00000010704POLR1A10069.487Taeniopygia_guttata
MGP_PahariEiJ_G0022230Polr1a10062.903ENSTRUG00000002210polr1a9962.967Takifugu_rubripes
MGP_PahariEiJ_G0022230Polr1a10059.619ENSTNIG00000010116polr1a10059.619Tetraodon_nigroviridis
MGP_PahariEiJ_G0022230Polr1a9985.305ENSTBEG00000008646POLR1A7496.460Tupaia_belangeri
MGP_PahariEiJ_G0022230Polr1a10083.227ENSTTRG00000008597POLR1A10083.227Tursiops_truncatus
MGP_PahariEiJ_G0022230Polr1a10083.600ENSUAMG00000012158-9487.553Ursus_americanus
MGP_PahariEiJ_G0022230Polr1a9975.627ENSUAMG00000000099-9875.714Ursus_americanus
MGP_PahariEiJ_G0022230Polr1a10086.029ENSUMAG00000006700POLR1A10086.203Ursus_maritimus
MGP_PahariEiJ_G0022230Polr1a10086.609ENSVVUG00000001245POLR1A10086.783Vulpes_vulpes
MGP_PahariEiJ_G0022230Polr1a10067.489ENSXETG00000001952polr1a10069.016Xenopus_tropicalis
MGP_PahariEiJ_G0022230Polr1a5259.690ENSXCOG00000007112-9162.702Xiphophorus_couchianus
MGP_PahariEiJ_G0022230Polr1a5363.087ENSXCOG00000013384polr1a9274.542Xiphophorus_couchianus
MGP_PahariEiJ_G0022230Polr1a10064.364ENSXMAG00000004032polr1a10064.402Xiphophorus_maculatus

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