EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0022449 (Gene tree)
Gene ID
110315997
Gene Symbol
Trnt1
Alias
2410043H24Rik|2610044E04Rik|CGI-47
Full Name
tRNA nucleotidyl transferase 1
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
13410 bases
Position
chr2:123027125-123040534
Accession
110315997
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0051463PolyA_polPF01743.203.9e-3411
MGP_PahariEiJ_P0051457PolyA_polPF01743.204.5e-3411
MGP_PahariEiJ_P0051458PolyA_polPF01743.201.7e-3311
MGP_PahariEiJ_P0051459PolyA_polPF01743.201.7e-3311
MGP_PahariEiJ_P0051460PolyA_polPF01743.201.7e-3311
MGP_PahariEiJ_P0051464PolyA_polPF01743.207.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0051461-378--- (aa)--
MGP_PahariEiJ_T0051460-1404XM_021190052MGP_PahariEiJ_P0051460434 (aa)XP_021045711UPI000A313A4E
MGP_PahariEiJ_T0051463-1363-MGP_PahariEiJ_P0051463203 (aa)--
MGP_PahariEiJ_T0051462-369--- (aa)--
MGP_PahariEiJ_T0051464-476-MGP_PahariEiJ_P0051464134 (aa)--
MGP_PahariEiJ_T0051457-1961-MGP_PahariEiJ_P0051457215 (aa)--
MGP_PahariEiJ_T0051458-1610XM_021190053MGP_PahariEiJ_P0051458434 (aa)XP_021045712UPI000A313A4E
MGP_PahariEiJ_T0051459-2279XM_021190050MGP_PahariEiJ_P0051459434 (aa)XP_021045709UPI000A313A4E
Gene Model
Click here to download MGP_PahariEiJ_G0022449's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022449's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0022449Trnt110091.935ENSG00000072756TRNT110091.935Homo_sapiens
MGP_PahariEiJ_G0022449Trnt18882.682ENSAPOG00000013687trnt19569.287Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022449Trnt110089.908ENSAMEG00000014520TRNT110089.908Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022449Trnt19777.551ENSACIG00000021706trnt19968.632Amphilophus_citrinellus
MGP_PahariEiJ_G0022449Trnt19777.041ENSAOCG00000024612trnt19967.765Amphiprion_ocellaris
MGP_PahariEiJ_G0022449Trnt19964.500ENSAPEG00000022627trnt19860.333Amphiprion_percula
MGP_PahariEiJ_G0022449Trnt18682.759ENSATEG00000008928trnt19970.968Anabas_testudineus
MGP_PahariEiJ_G0022449Trnt18975.452ENSAPLG00000004258TRNT19675.452Anas_platyrhynchos
MGP_PahariEiJ_G0022449Trnt19975.115ENSACAG00000005657TRNT19975.115Anolis_carolinensis
MGP_PahariEiJ_G0022449Trnt110091.475ENSANAG00000024802TRNT110091.475Aotus_nancymaae
MGP_PahariEiJ_G0022449Trnt19776.531ENSACLG00000022227trnt19967.765Astatotilapia_calliptera
MGP_PahariEiJ_G0022449Trnt19975.500ENSAMXG00000003960trnt19969.142Astyanax_mexicanus
MGP_PahariEiJ_G0022449Trnt110090.783ENSBTAG00000019534TRNT110090.783Bos_taurus
MGP_PahariEiJ_G0022449Trnt18663.636WBGene00010089hpo-319444.418Caenorhabditis_elegans
MGP_PahariEiJ_G0022449Trnt110091.475ENSCJAG00000015466TRNT110091.475Callithrix_jacchus
MGP_PahariEiJ_G0022449Trnt110089.401ENSCAFG00000005985TRNT19989.401Canis_familiaris
MGP_PahariEiJ_G0022449Trnt110089.401ENSCAFG00020014746TRNT19989.401Canis_lupus_dingo
MGP_PahariEiJ_G0022449Trnt110090.783ENSCHIG00000007030TRNT19990.783Capra_hircus
MGP_PahariEiJ_G0022449Trnt110092.166ENSTSYG00000013390TRNT110092.166Carlito_syrichta
MGP_PahariEiJ_G0022449Trnt18774.603ENSCAPG00000006891TRNT110074.603Cavia_aperea
MGP_PahariEiJ_G0022449Trnt110090.148ENSCPOG00000007849TRNT19990.069Cavia_porcellus
MGP_PahariEiJ_G0022449Trnt19589.423ENSCCAG00000002919TRNT110091.272Cebus_capucinus
MGP_PahariEiJ_G0022449Trnt110092.118ENSCATG00000031985TRNT19992.379Cercocebus_atys
MGP_PahariEiJ_G0022449Trnt110093.103ENSCLAG00000005186TRNT19991.917Chinchilla_lanigera
MGP_PahariEiJ_G0022449Trnt110092.857ENSCSAG00000011052TRNT110092.857Chlorocebus_sabaeus
MGP_PahariEiJ_G0022449Trnt19890.404ENSCHOG00000005712TRNT18491.515Choloepus_hoffmanni
MGP_PahariEiJ_G0022449Trnt18888.268ENSCPBG00000017636TRNT19481.707Chrysemys_picta_bellii
MGP_PahariEiJ_G0022449Trnt18663.218ENSCING00000007069-9944.444Ciona_intestinalis
MGP_PahariEiJ_G0022449Trnt19558.854ENSCSAVG00000007494-9944.340Ciona_savignyi
MGP_PahariEiJ_G0022449Trnt110092.611ENSCANG00000039030TRNT110092.396Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022449Trnt110096.083ENSCGRG00001009998Trnt110096.083Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022449Trnt110096.083ENSCGRG00000013410Trnt110096.083Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022449Trnt18881.006ENSCSEG00000008157trnt19669.118Cynoglossus_semilaevis
MGP_PahariEiJ_G0022449Trnt18881.564ENSCVAG00000019770trnt19670.588Cyprinodon_variegatus
MGP_PahariEiJ_G0022449Trnt19976.000ENSDARG00000075297trnt19968.677Danio_rerio
MGP_PahariEiJ_G0022449Trnt110090.148ENSDNOG00000008837TRNT110089.401Dasypus_novemcinctus
MGP_PahariEiJ_G0022449Trnt110089.862ENSDORG00000014035Trnt110089.862Dipodomys_ordii
MGP_PahariEiJ_G0022449Trnt18567.816FBgn0037369CG21008349.010Drosophila_melanogaster
MGP_PahariEiJ_G0022449Trnt19190.811ENSETEG00000018177TRNT110087.952Echinops_telfairi
MGP_PahariEiJ_G0022449Trnt18672.571ENSEBUG00000012779-9562.531Eptatretus_burgeri
MGP_PahariEiJ_G0022449Trnt110090.553ENSEASG00005003577TRNT110090.553Equus_asinus_asinus
MGP_PahariEiJ_G0022449Trnt110090.783ENSECAG00000014420TRNT110090.783Equus_caballus
MGP_PahariEiJ_G0022449Trnt19988.140ENSEEUG00000009567TRNT19988.140Erinaceus_europaeus
MGP_PahariEiJ_G0022449Trnt19973.000ENSELUG00000003802trnt19967.981Esox_lucius
MGP_PahariEiJ_G0022449Trnt110089.862ENSFCAG00000026805TRNT19989.862Felis_catus
MGP_PahariEiJ_G0022449Trnt18975.065ENSFALG00000013539TRNT110075.065Ficedula_albicollis
MGP_PahariEiJ_G0022449Trnt110092.611ENSFDAG00000018412TRNT19991.686Fukomys_damarensis
MGP_PahariEiJ_G0022449Trnt19278.351ENSFHEG00000019294trnt19968.558Fundulus_heteroclitus
MGP_PahariEiJ_G0022449Trnt18879.330ENSGMOG00000007460trnt19667.568Gadus_morhua
MGP_PahariEiJ_G0022449Trnt19774.000ENSGALG00000017368TRNT19673.012Gallus_gallus
MGP_PahariEiJ_G0022449Trnt18881.564ENSGAFG00000008647trnt19670.098Gambusia_affinis
MGP_PahariEiJ_G0022449Trnt18881.564ENSGACG00000011903trnt19668.586Gasterosteus_aculeatus
MGP_PahariEiJ_G0022449Trnt19187.027ENSGAGG00000020942TRNT19581.010Gopherus_agassizii
MGP_PahariEiJ_G0022449Trnt110092.166ENSGGOG00000015286TRNT110092.166Gorilla_gorilla
MGP_PahariEiJ_G0022449Trnt19776.531ENSHBUG00000002797trnt19967.765Haplochromis_burtoni
MGP_PahariEiJ_G0022449Trnt110092.118ENSHGLG00000003649TRNT19991.917Heterocephalus_glaber_female
MGP_PahariEiJ_G0022449Trnt110086.765ENSHGLG00000000221-9986.406Heterocephalus_glaber_female
MGP_PahariEiJ_G0022449Trnt19990.762ENSHGLG00100016421TRNT19990.762Heterocephalus_glaber_male
MGP_PahariEiJ_G0022449Trnt18882.682ENSHCOG00000010618trnt19667.892Hippocampus_comes
MGP_PahariEiJ_G0022449Trnt19973.762ENSIPUG00000000971trnt19967.436Ictalurus_punctatus
MGP_PahariEiJ_G0022449Trnt110091.133ENSSTOG00000000150TRNT19792.537Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022449Trnt110092.396ENSJJAG00000018561Trnt19992.396Jaculus_jaculus
MGP_PahariEiJ_G0022449Trnt19277.949ENSKMAG00000011307trnt19968.160Kryptolebias_marmoratus
MGP_PahariEiJ_G0022449Trnt19775.510ENSLBEG00000019457trnt19464.912Labrus_bergylta
MGP_PahariEiJ_G0022449Trnt19184.239ENSLACG00000013227TRNT19674.217Latimeria_chalumnae
MGP_PahariEiJ_G0022449Trnt19477.487ENSLOCG00000011105trnt19471.531Lepisosteus_oculatus
MGP_PahariEiJ_G0022449Trnt110092.611ENSLAFG00000023191TRNT110091.705Loxodonta_africana
MGP_PahariEiJ_G0022449Trnt110092.611ENSMFAG00000045113TRNT19992.610Macaca_fascicularis
MGP_PahariEiJ_G0022449Trnt110092.611ENSMMUG00000017983TRNT19992.610Macaca_mulatta
MGP_PahariEiJ_G0022449Trnt110092.611ENSMNEG00000037805TRNT19992.610Macaca_nemestrina
MGP_PahariEiJ_G0022449Trnt18894.764ENSMLEG00000033671TRNT19994.764Mandrillus_leucophaeus
MGP_PahariEiJ_G0022449Trnt19778.571ENSMAMG00000023401trnt19968.941Mastacembelus_armatus
MGP_PahariEiJ_G0022449Trnt19776.531ENSMZEG00005009141trnt19967.765Maylandia_zebra
MGP_PahariEiJ_G0022449Trnt17474.455ENSMGAG00000009971TRNT110074.455Meleagris_gallopavo
MGP_PahariEiJ_G0022449Trnt110096.059ENSMAUG00000020707Trnt110095.853Mesocricetus_auratus
MGP_PahariEiJ_G0022449Trnt110092.611ENSMICG00000016615TRNT110091.935Microcebus_murinus
MGP_PahariEiJ_G0022449Trnt110094.931ENSMOCG00000004539Trnt110094.931Microtus_ochrogaster
MGP_PahariEiJ_G0022449Trnt19080.874ENSMMOG00000010742trnt19768.523Mola_mola
MGP_PahariEiJ_G0022449Trnt19886.432ENSMODG00000004368TRNT19983.488Monodelphis_domestica
MGP_PahariEiJ_G0022449Trnt19775.000ENSMALG00000008376trnt19966.118Monopterus_albus
MGP_PahariEiJ_G0022449Trnt110098.618MGP_CAROLIEiJ_G0028698Trnt110098.618Mus_caroli
MGP_PahariEiJ_G0022449Trnt110098.522ENSMUSG00000013736Trnt110098.157Mus_musculus
MGP_PahariEiJ_G0022449Trnt110098.522MGP_SPRETEiJ_G0029726Trnt110098.157Mus_spretus
MGP_PahariEiJ_G0022449Trnt110090.783ENSMPUG00000017017TRNT19990.783Mustela_putorius_furo
MGP_PahariEiJ_G0022449Trnt18987.824ENSMLUG00000011864TRNT110087.824Myotis_lucifugus
MGP_PahariEiJ_G0022449Trnt110093.088ENSNGAG00000000537Trnt110093.088Nannospalax_galili
MGP_PahariEiJ_G0022449Trnt19776.531ENSNBRG00000023606trnt19967.246Neolamprologus_brichardi
MGP_PahariEiJ_G0022449Trnt110092.627ENSNLEG00000003226TRNT110092.627Nomascus_leucogenys
MGP_PahariEiJ_G0022449Trnt19884.343ENSMEUG00000004684TRNT19982.791Notamacropus_eugenii
MGP_PahariEiJ_G0022449Trnt18880.940ENSOPRG00000015067TRNT19980.940Ochotona_princeps
MGP_PahariEiJ_G0022449Trnt110093.103ENSODEG00000007597TRNT19991.224Octodon_degus
MGP_PahariEiJ_G0022449Trnt19776.531ENSONIG00000020273trnt19868.000Oreochromis_niloticus
MGP_PahariEiJ_G0022449Trnt110077.340ENSOANG00000007514TRNT19973.611Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022449Trnt110086.207ENSOCUG00000008580TRNT19985.253Oryctolagus_cuniculus
MGP_PahariEiJ_G0022449Trnt19377.368ENSORLG00000003165trnt19966.110Oryzias_latipes
MGP_PahariEiJ_G0022449Trnt19377.368ENSORLG00020022060trnt19966.826Oryzias_latipes_hni
MGP_PahariEiJ_G0022449Trnt19374.359ENSORLG00015018915trnt19964.858Oryzias_latipes_hsok
MGP_PahariEiJ_G0022449Trnt19777.041ENSOMEG00000003331trnt19964.471Oryzias_melastigma
MGP_PahariEiJ_G0022449Trnt110090.553ENSOARG00000008631TRNT19990.553Ovis_aries
MGP_PahariEiJ_G0022449Trnt110092.166ENSPPAG00000043566TRNT110092.166Pan_paniscus
MGP_PahariEiJ_G0022449Trnt110089.655ENSPPRG00000001327TRNT19989.838Panthera_pardus
MGP_PahariEiJ_G0022449Trnt110089.655ENSPTIG00000011448TRNT19989.631Panthera_tigris_altaica
MGP_PahariEiJ_G0022449Trnt110092.166ENSPTRG00000014564TRNT110092.166Pan_troglodytes
MGP_PahariEiJ_G0022449Trnt110092.118ENSPANG00000025944TRNT19992.379Papio_anubis
MGP_PahariEiJ_G0022449Trnt19775.377ENSPKIG00000020015trnt19969.535Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022449Trnt19180.353ENSPSIG00000017356TRNT19981.944Pelodiscus_sinensis
MGP_PahariEiJ_G0022449Trnt19774.490ENSPMGG00000008888trnt19865.882Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0022449Trnt110097.044ENSPEMG00000019845Trnt110097.005Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022449Trnt110084.236ENSPCIG00000030436TRNT110083.641Phascolarctos_cinereus
MGP_PahariEiJ_G0022449Trnt18881.564ENSPFOG00000006194trnt19670.098Poecilia_formosa
MGP_PahariEiJ_G0022449Trnt18881.564ENSPLAG00000015623trnt19969.975Poecilia_latipinna
MGP_PahariEiJ_G0022449Trnt18881.564ENSPMEG00000012216trnt19969.975Poecilia_mexicana
MGP_PahariEiJ_G0022449Trnt18980.110ENSPREG00000021470trnt19670.000Poecilia_reticulata
MGP_PahariEiJ_G0022449Trnt110093.103ENSPPYG00000013702TRNT110092.857Pongo_abelii
MGP_PahariEiJ_G0022449Trnt18891.123ENSPCAG00000001951TRNT110091.123Procavia_capensis
MGP_PahariEiJ_G0022449Trnt110092.118ENSPCOG00000022228TRNT110091.935Propithecus_coquereli
MGP_PahariEiJ_G0022449Trnt18891.146ENSPVAG00000008784TRNT110091.146Pteropus_vampyrus
MGP_PahariEiJ_G0022449Trnt19776.531ENSPNYG00000003120trnt19967.765Pundamilia_nyererei
MGP_PahariEiJ_G0022449Trnt19975.000ENSPNAG00000000565trnt19968.213Pygocentrus_nattereri
MGP_PahariEiJ_G0022449Trnt110096.552ENSRNOG00000006432Trnt110096.544Rattus_norvegicus
MGP_PahariEiJ_G0022449Trnt110092.611ENSRBIG00000042632TRNT110089.862Rhinopithecus_bieti
MGP_PahariEiJ_G0022449Trnt110092.166ENSRROG00000036866TRNT110092.166Rhinopithecus_roxellana
MGP_PahariEiJ_G0022449Trnt110091.935ENSSBOG00000021208TRNT110091.935Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022449Trnt19982.791ENSSHAG00000018861TRNT19982.791Sarcophilus_harrisii
MGP_PahariEiJ_G0022449Trnt18879.888ENSSFOG00015020844trnt19471.990Scleropages_formosus
MGP_PahariEiJ_G0022449Trnt19975.500ENSSMAG00000015432trnt19867.133Scophthalmus_maximus
MGP_PahariEiJ_G0022449Trnt19776.531ENSSDUG00000012320trnt19967.059Seriola_dumerili
MGP_PahariEiJ_G0022449Trnt19776.531ENSSLDG00000009325trnt19967.059Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022449Trnt15663.485ENSSLDG00000016463-9163.598Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022449Trnt18880.729ENSSPUG00000014153TRNT110080.729Sphenodon_punctatus
MGP_PahariEiJ_G0022449Trnt19776.531ENSSPAG00000021005trnt19966.824Stegastes_partitus
MGP_PahariEiJ_G0022449Trnt110090.553ENSSSCG00000011529TRNT110090.553Sus_scrofa
MGP_PahariEiJ_G0022449Trnt19374.815ENSTGUG00000010192TRNT19974.815Taeniopygia_guttata
MGP_PahariEiJ_G0022449Trnt18882.682ENSTRUG00000001088trnt19670.098Takifugu_rubripes
MGP_PahariEiJ_G0022449Trnt18882.682ENSTNIG00000007363trnt19967.599Tetraodon_nigroviridis
MGP_PahariEiJ_G0022449Trnt110085.075ENSTBEG00000006367TRNT110070.000Tupaia_belangeri
MGP_PahariEiJ_G0022449Trnt110090.553ENSTTRG00000007803TRNT110090.553Tursiops_truncatus
MGP_PahariEiJ_G0022449Trnt110090.148ENSUAMG00000022574TRNT19990.092Ursus_americanus
MGP_PahariEiJ_G0022449Trnt110090.323ENSUMAG00000024092TRNT19990.323Ursus_maritimus
MGP_PahariEiJ_G0022449Trnt110089.631ENSVVUG00000012810TRNT19989.631Vulpes_vulpes
MGP_PahariEiJ_G0022449Trnt19767.662ENSXETG00000025091trnt19967.164Xenopus_tropicalis
MGP_PahariEiJ_G0022449Trnt18881.564ENSXCOG00000010150trnt19669.853Xiphophorus_couchianus
MGP_PahariEiJ_G0022449Trnt18881.006ENSXMAG00000002227trnt19669.363Xiphophorus_maculatus

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