EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022463 (Gene tree)
Gene ID: 110316714
Gene Symbol: Rad18
Alias: 2810024C04Rik
Full Name: RAD18 E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 68589 bases
Position: chr2:128384260-128452848
Accession: 1890476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0051516	SAP	PF02037.27	4.8e-12	1	1
MGP_PahariEiJ_P0051515	SAP	PF02037.27	5e-12	1	1
MGP_PahariEiJ_P0051517	SAP	PF02037.27	5.3e-12	1	1
MGP_PahariEiJ_P0051514	SAP	PF02037.27	5.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0051515	-	2194	-	MGP_PahariEiJ_P0051515	449 (aa)	-	-
MGP_PahariEiJ_T0051514	-	2443	-	MGP_PahariEiJ_P0051514	473 (aa)	-	-
MGP_PahariEiJ_T0051517	-	2443	-	MGP_PahariEiJ_P0051517	520 (aa)	-	-
MGP_PahariEiJ_T0051516	-	2110	-	MGP_PahariEiJ_P0051516	428 (aa)	-	-
MGP_PahariEiJ_T0051521	-	2011	-	-	- (aa)	-	-
MGP_PahariEiJ_T0051520	-	1376	-	MGP_PahariEiJ_P0051520	309 (aa)	-	-
MGP_PahariEiJ_T0051519	-	3397	-	-	- (aa)	-	-
MGP_PahariEiJ_T0051518	-	616	-	MGP_PahariEiJ_P0051518	205 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0022463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022463	Rad18	100	77.023	ENSG00000070950	RAD18	98	91.011	Homo_sapiens
MGP_PahariEiJ_G0022463	Rad18	98	42.900	ENSAPOG00000005260	rad18	88	40.183	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022463	Rad18	100	77.401	ENSAMEG00000012375	RAD18	100	67.663	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022463	Rad18	98	40.719	ENSACIG00000020655	rad18	95	39.663	Amphilophus_citrinellus
MGP_PahariEiJ_G0022463	Rad18	98	44.277	ENSAOCG00000004507	rad18	86	42.995	Amphiprion_ocellaris
MGP_PahariEiJ_G0022463	Rad18	98	43.675	ENSAPEG00000016837	rad18	94	42.317	Amphiprion_percula
MGP_PahariEiJ_G0022463	Rad18	90	56.944	ENSAPLG00000003138	RAD18	91	46.868	Anas_platyrhynchos
MGP_PahariEiJ_G0022463	Rad18	98	76.238	ENSANAG00000033360	RAD18	100	70.722	Aotus_nancymaae
MGP_PahariEiJ_G0022463	Rad18	98	42.522	ENSACLG00000023506	rad18	84	44.140	Astatotilapia_calliptera
MGP_PahariEiJ_G0022463	Rad18	96	46.078	ENSAMXG00000002534	rad18	92	42.092	Astyanax_mexicanus
MGP_PahariEiJ_G0022463	Rad18	100	75.658	ENSBTAG00000012142	RAD18	99	78.070	Bos_taurus
MGP_PahariEiJ_G0022463	Rad18	98	75.578	ENSCJAG00000040303	RAD18	100	72.651	Callithrix_jacchus
MGP_PahariEiJ_G0022463	Rad18	98	73.927	ENSCAFG00000005548	RAD18	100	69.565	Canis_familiaris
MGP_PahariEiJ_G0022463	Rad18	98	73.927	ENSCAFG00020009228	RAD18	100	69.565	Canis_lupus_dingo
MGP_PahariEiJ_G0022463	Rad18	100	76.316	ENSCHIG00000007965	RAD18	100	76.316	Capra_hircus
MGP_PahariEiJ_G0022463	Rad18	98	73.927	ENSTSYG00000012189	RAD18	100	68.998	Carlito_syrichta
MGP_PahariEiJ_G0022463	Rad18	95	70.606	ENSCAPG00000000356	RAD18	99	72.050	Cavia_aperea
MGP_PahariEiJ_G0022463	Rad18	98	74.917	ENSCPOG00000013890	RAD18	100	69.349	Cavia_porcellus
MGP_PahariEiJ_G0022463	Rad18	98	75.908	ENSCCAG00000022920	RAD18	100	70.913	Cebus_capucinus
MGP_PahariEiJ_G0022463	Rad18	98	74.917	ENSCATG00000039277	RAD18	100	72.521	Cercocebus_atys
MGP_PahariEiJ_G0022463	Rad18	98	73.597	ENSCLAG00000003652	RAD18	100	69.905	Chinchilla_lanigera
MGP_PahariEiJ_G0022463	Rad18	98	75.908	ENSCSAG00000010783	RAD18	100	70.056	Chlorocebus_sabaeus
MGP_PahariEiJ_G0022463	Rad18	97	58.442	ENSCPBG00000014787	RAD18	99	49.799	Chrysemys_picta_bellii
MGP_PahariEiJ_G0022463	Rad18	98	74.917	ENSCANG00000007308	RAD18	100	70.588	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022463	Rad18	100	90.869	ENSCGRG00001018154	-	99	92.690	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022463	Rad18	98	86.928	ENSCGRG00001010209	-	100	80.885	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022463	Rad18	98	87.255	ENSCGRG00000019636	-	100	81.087	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022463	Rad18	100	90.869	ENSCGRG00000007283	-	99	92.690	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022463	Rad18	98	44.737	ENSCSEG00000002516	rad18	78	45.682	Cynoglossus_semilaevis
MGP_PahariEiJ_G0022463	Rad18	98	48.089	ENSDARG00000027938	rad18	87	46.565	Danio_rerio
MGP_PahariEiJ_G0022463	Rad18	98	77.558	ENSDNOG00000040055	RAD18	100	70.588	Dasypus_novemcinctus
MGP_PahariEiJ_G0022463	Rad18	100	76.586	ENSDORG00000001099	Rad18	99	78.551	Dipodomys_ordii
MGP_PahariEiJ_G0022463	Rad18	98	55.446	ENSETEG00000002268	RAD18	100	59.101	Echinops_telfairi
MGP_PahariEiJ_G0022463	Rad18	98	79.538	ENSEASG00005013316	RAD18	94	72.655	Equus_asinus_asinus
MGP_PahariEiJ_G0022463	Rad18	98	79.538	ENSECAG00000010746	RAD18	94	76.042	Equus_caballus
MGP_PahariEiJ_G0022463	Rad18	98	66.007	ENSEEUG00000000236	-	73	68.323	Erinaceus_europaeus
MGP_PahariEiJ_G0022463	Rad18	95	43.519	ENSELUG00000000733	rad18	97	37.728	Esox_lucius
MGP_PahariEiJ_G0022463	Rad18	98	75.248	ENSFCAG00000025747	RAD18	100	71.347	Felis_catus
MGP_PahariEiJ_G0022463	Rad18	95	57.525	ENSFALG00000013625	RAD18	88	53.652	Ficedula_albicollis
MGP_PahariEiJ_G0022463	Rad18	98	75.987	ENSFDAG00000009907	RAD18	100	68.620	Fukomys_damarensis
MGP_PahariEiJ_G0022463	Rad18	97	57.980	ENSGALG00000008368	RAD18	76	57.297	Gallus_gallus
MGP_PahariEiJ_G0022463	Rad18	98	43.910	ENSGACG00000000920	rad18	80	44.414	Gasterosteus_aculeatus
MGP_PahariEiJ_G0022463	Rad18	87	58.545	ENSGAGG00000005184	RAD18	100	49.145	Gopherus_agassizii
MGP_PahariEiJ_G0022463	Rad18	98	75.578	ENSGGOG00000008391	RAD18	100	70.722	Gorilla_gorilla
MGP_PahariEiJ_G0022463	Rad18	83	46.899	ENSHBUG00000013322	rad18	83	47.352	Haplochromis_burtoni
MGP_PahariEiJ_G0022463	Rad18	100	78.964	ENSHGLG00000009196	-	99	78.964	Heterocephalus_glaber_female
MGP_PahariEiJ_G0022463	Rad18	100	78.964	ENSHGLG00100017675	-	99	78.964	Heterocephalus_glaber_male
MGP_PahariEiJ_G0022463	Rad18	96	44.262	ENSIPUG00000018681	rad18	89	40.000	Ictalurus_punctatus
MGP_PahariEiJ_G0022463	Rad18	100	77.994	ENSSTOG00000004870	-	99	77.994	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022463	Rad18	100	81.596	ENSJJAG00000001484	Rad18	99	83.041	Jaculus_jaculus
MGP_PahariEiJ_G0022463	Rad18	96	44.000	ENSKMAG00000020725	rad18	78	43.358	Kryptolebias_marmoratus
MGP_PahariEiJ_G0022463	Rad18	92	53.512	ENSLACG00000018437	RAD18	96	52.649	Latimeria_chalumnae
MGP_PahariEiJ_G0022463	Rad18	98	49.346	ENSLOCG00000010629	rad18	95	45.000	Lepisosteus_oculatus
MGP_PahariEiJ_G0022463	Rad18	98	71.104	ENSLAFG00000004667	RAD18	100	65.164	Loxodonta_africana
MGP_PahariEiJ_G0022463	Rad18	98	74.917	ENSMFAG00000028864	RAD18	100	70.152	Macaca_fascicularis
MGP_PahariEiJ_G0022463	Rad18	100	76.375	ENSMMUG00000020013	RAD18	99	76.375	Macaca_mulatta
MGP_PahariEiJ_G0022463	Rad18	98	74.917	ENSMNEG00000013464	RAD18	100	70.152	Macaca_nemestrina
MGP_PahariEiJ_G0022463	Rad18	98	75.248	ENSMLEG00000014306	RAD18	100	70.152	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022463	Rad18	86	39.414	ENSMAMG00000023936	rad18	79	40.519	Mastacembelus_armatus
MGP_PahariEiJ_G0022463	Rad18	98	42.899	ENSMZEG00005010577	rad18	73	43.890	Maylandia_zebra
MGP_PahariEiJ_G0022463	Rad18	90	57.292	ENSMGAG00000010131	RAD18	91	47.210	Meleagris_gallopavo
MGP_PahariEiJ_G0022463	Rad18	100	90.200	ENSMAUG00000020642	Rad18	99	92.690	Mesocricetus_auratus
MGP_PahariEiJ_G0022463	Rad18	94	74.570	ENSMICG00000013536	RAD18	99	70.291	Microcebus_murinus
MGP_PahariEiJ_G0022463	Rad18	100	88.196	ENSMOCG00000009114	Rad18	100	88.506	Microtus_ochrogaster
MGP_PahariEiJ_G0022463	Rad18	100	40.517	ENSMMOG00000021793	rad18	98	42.708	Mola_mola
MGP_PahariEiJ_G0022463	Rad18	98	64.169	ENSMODG00000004679	RAD18	88	57.952	Monodelphis_domestica
MGP_PahariEiJ_G0022463	Rad18	99	97.170	MGP_CAROLIEiJ_G0028712	Rad18	99	97.170	Mus_caroli
MGP_PahariEiJ_G0022463	Rad18	100	96.117	ENSMUSG00000030254	Rad18	100	96.117	Mus_musculus
MGP_PahariEiJ_G0022463	Rad18	100	97.087	MGP_SPRETEiJ_G0029740	Rad18	100	97.087	Mus_spretus
MGP_PahariEiJ_G0022463	Rad18	98	76.898	ENSMPUG00000017063	RAD18	100	71.727	Mustela_putorius_furo
MGP_PahariEiJ_G0022463	Rad18	98	72.964	ENSMLUG00000016494	RAD18	100	68.284	Myotis_lucifugus
MGP_PahariEiJ_G0022463	Rad18	100	84.701	ENSNGAG00000012464	Rad18	99	87.135	Nannospalax_galili
MGP_PahariEiJ_G0022463	Rad18	98	40.426	ENSNBRG00000004794	rad18	97	40.420	Neolamprologus_brichardi
MGP_PahariEiJ_G0022463	Rad18	98	76.568	ENSNLEG00000003789	RAD18	100	70.857	Nomascus_leucogenys
MGP_PahariEiJ_G0022463	Rad18	81	60.630	ENSMEUG00000003444	-	82	51.020	Notamacropus_eugenii
MGP_PahariEiJ_G0022463	Rad18	98	71.617	ENSOPRG00000013856	RAD18	100	64.228	Ochotona_princeps
MGP_PahariEiJ_G0022463	Rad18	96	77.441	ENSODEG00000018158	RAD18	97	77.441	Octodon_degus
MGP_PahariEiJ_G0022463	Rad18	98	44.892	ENSONIG00000018979	rad18	84	45.337	Oreochromis_niloticus
MGP_PahariEiJ_G0022463	Rad18	98	73.927	ENSOCUG00000000013	RAD18	100	67.362	Oryctolagus_cuniculus
MGP_PahariEiJ_G0022463	Rad18	96	38.415	ENSORLG00000029026	rad18	95	40.379	Oryzias_latipes
MGP_PahariEiJ_G0022463	Rad18	98	77.124	ENSOGAG00000001410	RAD18	100	70.238	Otolemur_garnettii
MGP_PahariEiJ_G0022463	Rad18	98	74.837	ENSOARG00000007445	RAD18	100	70.301	Ovis_aries
MGP_PahariEiJ_G0022463	Rad18	98	76.238	ENSPPAG00000035797	RAD18	100	70.913	Pan_paniscus
MGP_PahariEiJ_G0022463	Rad18	98	74.917	ENSPPRG00000004021	RAD18	100	71.347	Panthera_pardus
MGP_PahariEiJ_G0022463	Rad18	98	74.917	ENSPTIG00000008602	RAD18	100	71.347	Panthera_tigris_altaica
MGP_PahariEiJ_G0022463	Rad18	98	76.238	ENSPTRG00000014583	RAD18	100	70.532	Pan_troglodytes
MGP_PahariEiJ_G0022463	Rad18	98	74.587	ENSPANG00000008855	RAD18	100	69.962	Papio_anubis
MGP_PahariEiJ_G0022463	Rad18	97	59.283	ENSPSIG00000006928	RAD18	99	50.298	Pelodiscus_sinensis
MGP_PahariEiJ_G0022463	Rad18	98	44.872	ENSPMGG00000013294	rad18	92	44.753	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0022463	Rad18	100	88.641	ENSPEMG00000022129	Rad18	99	91.520	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022463	Rad18	96	63.245	ENSPCIG00000024872	RAD18	92	60.789	Phascolarctos_cinereus
MGP_PahariEiJ_G0022463	Rad18	96	42.813	ENSPFOG00000002722	rad18	96	44.565	Poecilia_formosa
MGP_PahariEiJ_G0022463	Rad18	98	76.568	ENSPPYG00000013688	RAD18	100	70.722	Pongo_abelii
MGP_PahariEiJ_G0022463	Rad18	96	62.081	ENSPCAG00000008229	RAD18	100	56.592	Procavia_capensis
MGP_PahariEiJ_G0022463	Rad18	100	70.476	ENSPVAG00000012220	RAD18	100	70.476	Pteropus_vampyrus
MGP_PahariEiJ_G0022463	Rad18	98	44.377	ENSPNYG00000006815	rad18	78	45.153	Pundamilia_nyererei
MGP_PahariEiJ_G0022463	Rad18	98	41.298	ENSPNAG00000016082	rad18	84	40.399	Pygocentrus_nattereri
MGP_PahariEiJ_G0022463	Rad18	98	93.069	ENSRNOG00000005907	Rad18	100	89.069	Rattus_norvegicus
MGP_PahariEiJ_G0022463	Rad18	98	73.597	ENSRBIG00000044173	RAD18	100	69.260	Rhinopithecus_bieti
MGP_PahariEiJ_G0022463	Rad18	98	75.578	ENSRROG00000043948	RAD18	100	71.107	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022463	Rad18	98	76.238	ENSSBOG00000008434	-	100	70.532	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022463	Rad18	95	56.376	ENSSHAG00000012472	-	99	56.576	Sarcophilus_harrisii
MGP_PahariEiJ_G0022463	Rad18	98	45.886	ENSSFOG00015019264	rad18	79	45.455	Scleropages_formosus
MGP_PahariEiJ_G0022463	Rad18	95	58.497	ENSSPUG00000017486	RAD18	97	58.497	Sphenodon_punctatus
MGP_PahariEiJ_G0022463	Rad18	98	43.072	ENSSPAG00000007165	rad18	81	42.857	Stegastes_partitus
MGP_PahariEiJ_G0022463	Rad18	98	75.329	ENSSSCG00000026158	RAD18	100	69.886	Sus_scrofa
MGP_PahariEiJ_G0022463	Rad18	92	53.767	ENSTGUG00000010405	RAD18	82	53.261	Taeniopygia_guttata
MGP_PahariEiJ_G0022463	Rad18	95	43.131	ENSTRUG00000003517	rad18	97	43.785	Takifugu_rubripes
MGP_PahariEiJ_G0022463	Rad18	98	45.570	ENSTNIG00000014625	rad18	100	45.430	Tetraodon_nigroviridis
MGP_PahariEiJ_G0022463	Rad18	98	77.228	ENSTTRG00000005034	RAD18	100	71.374	Tursiops_truncatus
MGP_PahariEiJ_G0022463	Rad18	91	58.929	ENSUAMG00000009763	-	84	58.304	Ursus_americanus
MGP_PahariEiJ_G0022463	Rad18	98	75.908	ENSUMAG00000019279	RAD18	100	71.257	Ursus_maritimus
MGP_PahariEiJ_G0022463	Rad18	96	76.689	ENSVPAG00000002063	RAD18	100	65.377	Vicugna_pacos
MGP_PahariEiJ_G0022463	Rad18	100	72.407	ENSVVUG00000025318	RAD18	100	74.411	Vulpes_vulpes
MGP_PahariEiJ_G0022463	Rad18	95	52.733	ENSXETG00000033878	RAD18	99	53.109	Xenopus_tropicalis
MGP_PahariEiJ_G0022463	Rad18	96	38.138	ENSXCOG00000020018	rad18	94	40.107	Xiphophorus_couchianus
MGP_PahariEiJ_G0022463	Rad18	96	38.554	ENSXMAG00000001516	rad18	94	40.909	Xiphophorus_maculatus