EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022511 (Gene tree)
Gene ID: 110316975
Gene Symbol: -
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 11344 bases
Position: chr2:131544481-131555824
Accession: 110316975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0051798	MBD	PF01429.19	6.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0051798	-	2467	-	MGP_PahariEiJ_P0051798	399 (aa)	-	-
MGP_PahariEiJ_T0051797	-	669	-	MGP_PahariEiJ_P0051797	175 (aa)	-	-
MGP_PahariEiJ_T0051796	-	2947	-	MGP_PahariEiJ_P0051796	374 (aa)	-	-
MGP_PahariEiJ_T0051795	-	2346	-	MGP_PahariEiJ_P0051795	567 (aa)	XP_021046962	UPI000A30AE71

Gene Model

Click here to download MGP_PahariEiJ_G0022511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022511	-	100	67.361	ENSG00000129071	MBD4	98	93.548	Homo_sapiens
MGP_PahariEiJ_G0022511	-	86	43.347	ENSAPOG00000021668	mbd4	95	43.548	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022511	-	100	66.435	ENSAMEG00000004562	MBD4	99	66.435	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022511	-	86	44.289	ENSAOCG00000001157	mbd4	95	44.289	Amphiprion_ocellaris
MGP_PahariEiJ_G0022511	-	86	44.400	ENSAPEG00000016131	mbd4	95	44.600	Amphiprion_percula
MGP_PahariEiJ_G0022511	-	86	44.311	ENSATEG00000014594	MBD4	86	44.311	Anabas_testudineus
MGP_PahariEiJ_G0022511	-	100	62.653	ENSBTAG00000021645	MBD4	100	62.653	Bos_taurus
MGP_PahariEiJ_G0022511	-	100	65.331	ENSCJAG00000017293	MBD4	99	65.331	Callithrix_jacchus
MGP_PahariEiJ_G0022511	-	100	65.858	ENSCAFG00000004867	MBD4	99	65.858	Canis_familiaris
MGP_PahariEiJ_G0022511	-	100	65.858	ENSCAFG00020007082	MBD4	99	65.858	Canis_lupus_dingo
MGP_PahariEiJ_G0022511	-	100	62.653	ENSCHIG00000009760	MBD4	100	62.653	Capra_hircus
MGP_PahariEiJ_G0022511	-	100	65.625	ENSCCAG00000029796	MBD4	99	65.625	Cebus_capucinus
MGP_PahariEiJ_G0022511	-	100	67.190	ENSCATG00000035211	MBD4	99	67.190	Cercocebus_atys
MGP_PahariEiJ_G0022511	-	99	64.488	ENSCLAG00000008974	MBD4	99	64.488	Chinchilla_lanigera
MGP_PahariEiJ_G0022511	-	100	67.596	ENSCSAG00000009037	MBD4	99	67.596	Chlorocebus_sabaeus
MGP_PahariEiJ_G0022511	-	93	46.678	ENSCPBG00000014704	MBD4	96	46.678	Chrysemys_picta_bellii
MGP_PahariEiJ_G0022511	-	100	67.714	ENSCANG00000007120	MBD4	99	67.714	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022511	-	100	76.056	ENSCGRG00001003507	Mbd4	100	76.408	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022511	-	100	76.056	ENSCGRG00000010974	Mbd4	100	76.408	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022511	-	100	64.049	ENSDNOG00000049619	MBD4	100	64.049	Dasypus_novemcinctus
MGP_PahariEiJ_G0022511	-	76	59.353	ENSDORG00000000902	-	98	56.842	Dipodomys_ordii
MGP_PahariEiJ_G0022511	-	100	67.539	ENSEASG00005014800	MBD4	100	67.539	Equus_asinus_asinus
MGP_PahariEiJ_G0022511	-	100	67.190	ENSECAG00000022106	MBD4	100	67.190	Equus_caballus
MGP_PahariEiJ_G0022511	-	89	61.644	ENSEEUG00000011459	MBD4	94	61.644	Erinaceus_europaeus
MGP_PahariEiJ_G0022511	-	55	79.412	ENSELUG00000018483	MBD4	57	79.412	Esox_lucius
MGP_PahariEiJ_G0022511	-	100	66.609	ENSFCAG00000000083	MBD4	99	66.609	Felis_catus
MGP_PahariEiJ_G0022511	-	82	47.444	ENSFALG00000013663	MBD4	99	47.619	Ficedula_albicollis
MGP_PahariEiJ_G0022511	-	86	40.891	ENSGMOG00000013830	mbd4	100	40.891	Gadus_morhua
MGP_PahariEiJ_G0022511	-	86	43.177	ENSGAFG00000016011	mbd4	98	43.117	Gambusia_affinis
MGP_PahariEiJ_G0022511	-	93	48.233	ENSGAGG00000018644	MBD4	96	48.233	Gopherus_agassizii
MGP_PahariEiJ_G0022511	-	100	66.551	ENSGGOG00000010698	MBD4	99	66.551	Gorilla_gorilla
MGP_PahariEiJ_G0022511	-	100	65.035	ENSHGLG00000009034	MBD4	100	65.035	Heterocephalus_glaber_female
MGP_PahariEiJ_G0022511	-	100	65.035	ENSHGLG00100000135	MBD4	100	65.035	Heterocephalus_glaber_male
MGP_PahariEiJ_G0022511	-	100	63.589	ENSSTOG00000020663	MBD4	100	63.589	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022511	-	99	64.706	ENSLAFG00000010609	MBD4	99	64.706	Loxodonta_africana
MGP_PahariEiJ_G0022511	-	99	67.483	ENSMFAG00000002266	MBD4	99	67.483	Macaca_fascicularis
MGP_PahariEiJ_G0022511	-	99	67.304	ENSMMUG00000012723	MBD4	99	67.304	Macaca_mulatta
MGP_PahariEiJ_G0022511	-	96	65.876	ENSMNEG00000029752	MBD4	99	65.876	Macaca_nemestrina
MGP_PahariEiJ_G0022511	-	100	67.016	ENSMLEG00000024859	MBD4	99	67.016	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022511	-	56	31.163	ENSMAMG00000024084	-	53	31.163	Mastacembelus_armatus
MGP_PahariEiJ_G0022511	-	100	67.361	ENSMICG00000008022	MBD4	99	67.361	Microcebus_murinus
MGP_PahariEiJ_G0022511	-	100	61.692	ENSMOCG00000002466	-	100	61.692	Microtus_ochrogaster
MGP_PahariEiJ_G0022511	-	87	56.360	ENSMODG00000006399	-	99	56.360	Monodelphis_domestica
MGP_PahariEiJ_G0022511	-	86	44.130	ENSMALG00000021517	mbd4	86	44.130	Monopterus_albus
MGP_PahariEiJ_G0022511	-	100	91.182	MGP_CAROLIEiJ_G0028760	Mbd4	100	91.182	Mus_caroli
MGP_PahariEiJ_G0022511	-	100	89.065	ENSMUSG00000030322	Mbd4	100	89.065	Mus_musculus
MGP_PahariEiJ_G0022511	-	100	89.065	MGP_SPRETEiJ_G0029788	Mbd4	100	89.065	Mus_spretus
MGP_PahariEiJ_G0022511	-	100	65.096	ENSMPUG00000017195	MBD4	99	65.096	Mustela_putorius_furo
MGP_PahariEiJ_G0022511	-	95	68.450	ENSMLUG00000014766	MBD4	99	68.450	Myotis_lucifugus
MGP_PahariEiJ_G0022511	-	100	67.304	ENSNLEG00000005337	MBD4	99	67.304	Nomascus_leucogenys
MGP_PahariEiJ_G0022511	-	100	59.516	ENSOPRG00000000473	MBD4	99	59.516	Ochotona_princeps
MGP_PahariEiJ_G0022511	-	86	43.952	ENSONIG00000017212	mbd4	100	43.952	Oreochromis_niloticus
MGP_PahariEiJ_G0022511	-	82	39.815	ENSOANG00000004589	-	89	46.384	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022511	-	100	58.997	ENSOCUG00000013006	MBD4	99	58.997	Oryctolagus_cuniculus
MGP_PahariEiJ_G0022511	-	100	64.098	ENSOGAG00000010236	MBD4	100	64.098	Otolemur_garnettii
MGP_PahariEiJ_G0022511	-	100	63.002	ENSOARG00000014699	MBD4	100	63.002	Ovis_aries
MGP_PahariEiJ_G0022511	-	100	66.957	ENSPPAG00000036528	MBD4	99	66.957	Pan_paniscus
MGP_PahariEiJ_G0022511	-	100	66.028	ENSPPRG00000016480	MBD4	99	66.028	Panthera_pardus
MGP_PahariEiJ_G0022511	-	100	67.188	ENSPTRG00000015377	MBD4	99	67.188	Pan_troglodytes
MGP_PahariEiJ_G0022511	-	100	67.247	ENSPANG00000015047	MBD4	99	67.247	Papio_anubis
MGP_PahariEiJ_G0022511	-	93	50.088	ENSPSIG00000007892	MBD4	95	50.088	Pelodiscus_sinensis
MGP_PahariEiJ_G0022511	-	94	70.074	ENSPEMG00000006226	Mbd4	99	70.446	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022511	-	90	53.396	ENSPCIG00000002276	-	98	53.396	Phascolarctos_cinereus
MGP_PahariEiJ_G0022511	-	54	58.871	ENSPFOG00000014471	mbd4	99	44.223	Poecilia_formosa
MGP_PahariEiJ_G0022511	-	100	66.551	ENSPPYG00000013417	MBD4	99	66.551	Pongo_abelii
MGP_PahariEiJ_G0022511	-	96	60.909	ENSPCAG00000012915	MBD4	99	60.909	Procavia_capensis
MGP_PahariEiJ_G0022511	-	100	66.667	ENSPVAG00000005238	MBD4	99	66.667	Pteropus_vampyrus
MGP_PahariEiJ_G0022511	-	100	82.837	ENSRNOG00000010919	Mbd4	100	82.837	Rattus_norvegicus
MGP_PahariEiJ_G0022511	-	100	67.365	ENSRBIG00000027722	MBD4	99	67.365	Rhinopithecus_bieti
MGP_PahariEiJ_G0022511	-	100	67.190	ENSRROG00000029136	MBD4	99	67.190	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022511	-	100	65.854	ENSSBOG00000016810	MBD4	99	65.854	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022511	-	95	54.011	ENSSHAG00000012953	MBD4	96	54.367	Sarcophilus_harrisii
MGP_PahariEiJ_G0022511	-	86	42.074	ENSSMAG00000013958	-	67	42.578	Scophthalmus_maximus
MGP_PahariEiJ_G0022511	-	86	45.492	ENSSDUG00000001365	mbd4	93	45.492	Seriola_dumerili
MGP_PahariEiJ_G0022511	-	76	39.450	ENSSLDG00000010295	MBD4	80	39.450	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022511	-	81	56.317	ENSSARG00000004496	-	80	56.317	Sorex_araneus
MGP_PahariEiJ_G0022511	-	93	45.863	ENSSPUG00000017344	MBD4	99	45.863	Sphenodon_punctatus
MGP_PahariEiJ_G0022511	-	100	66.609	ENSSSCG00000033303	MBD4	100	66.609	Sus_scrofa
MGP_PahariEiJ_G0022511	-	86	43.967	ENSTRUG00000010124	mbd4	95	43.967	Takifugu_rubripes
MGP_PahariEiJ_G0022511	-	86	42.829	ENSTNIG00000017927	mbd4	100	42.829	Tetraodon_nigroviridis
MGP_PahariEiJ_G0022511	-	86	62.385	ENSTBEG00000003041	-	85	62.385	Tupaia_belangeri
MGP_PahariEiJ_G0022511	-	99	65.901	ENSTTRG00000011265	MBD4	99	65.901	Tursiops_truncatus
MGP_PahariEiJ_G0022511	-	87	69.739	ENSUAMG00000000814	MBD4	99	69.739	Ursus_americanus
MGP_PahariEiJ_G0022511	-	100	66.783	ENSUMAG00000017542	MBD4	100	66.783	Ursus_maritimus
MGP_PahariEiJ_G0022511	-	65	65.385	ENSVPAG00000004040	-	67	65.385	Vicugna_pacos
MGP_PahariEiJ_G0022511	-	100	65.976	ENSVVUG00000014222	MBD4	99	65.976	Vulpes_vulpes
MGP_PahariEiJ_G0022511	-	86	44.309	ENSXMAG00000021129	mbd4	98	43.927	Xiphophorus_maculatus