EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022539 (Gene tree)
Gene ID: 110315973
Gene Symbol: Bms1
Alias: Bms1l
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 32728 bases
Position: chr2:133938364-133971091
Accession: 110315973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0051936	AARP2CN	PF08142.12	5.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0051938	-	433	-	-	- (aa)	-	-
MGP_PahariEiJ_T0051937	-	3065	-	-	- (aa)	-	-
MGP_PahariEiJ_T0051936	-	4309	XM_021190010	MGP_PahariEiJ_P0051936	1282 (aa)	XP_021045669	UPI000A30EFC2

Gene Model

Click here to download MGP_PahariEiJ_G0022539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022539	Bms1	99	85.280	ENSG00000165733	BMS1	99	85.202	Homo_sapiens
MGP_PahariEiJ_G0022539	Bms1	71	71.280	ENSAPOG00000002296	bms1	99	58.988	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022539	Bms1	99	84.484	ENSAMEG00000016834	BMS1	99	84.950	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022539	Bms1	82	79.292	ENSACIG00000002588	bms1	84	77.778	Amphilophus_citrinellus
MGP_PahariEiJ_G0022539	Bms1	83	69.345	ENSAOCG00000018088	bms1	99	60.972	Amphiprion_ocellaris
MGP_PahariEiJ_G0022539	Bms1	81	70.495	ENSAPEG00000014673	bms1	98	60.856	Amphiprion_percula
MGP_PahariEiJ_G0022539	Bms1	89	67.464	ENSATEG00000023465	bms1	51	68.051	Anabas_testudineus
MGP_PahariEiJ_G0022539	Bms1	96	71.314	ENSAPLG00000003759	BMS1	99	72.036	Anas_platyrhynchos
MGP_PahariEiJ_G0022539	Bms1	99	69.367	ENSACAG00000004537	-	99	69.555	Anolis_carolinensis
MGP_PahariEiJ_G0022539	Bms1	99	84.735	ENSANAG00000023432	BMS1	99	84.891	Aotus_nancymaae
MGP_PahariEiJ_G0022539	Bms1	92	67.194	ENSACLG00000001294	bms1	93	66.145	Astatotilapia_calliptera
MGP_PahariEiJ_G0022539	Bms1	82	72.248	ENSAMXG00000011236	bms1	50	65.385	Astyanax_mexicanus
MGP_PahariEiJ_G0022539	Bms1	99	84.280	ENSBTAG00000012878	BMS1	99	84.436	Bos_taurus
MGP_PahariEiJ_G0022539	Bms1	80	52.415	WBGene00022021	Y61A9LA.10	96	52.785	Caenorhabditis_elegans
MGP_PahariEiJ_G0022539	Bms1	99	85.280	ENSCJAG00000021705	BMS1	99	84.969	Callithrix_jacchus
MGP_PahariEiJ_G0022539	Bms1	99	84.125	ENSCAFG00000007114	BMS1	99	85.058	Canis_familiaris
MGP_PahariEiJ_G0022539	Bms1	99	84.125	ENSCAFG00020025282	BMS1	99	85.058	Canis_lupus_dingo
MGP_PahariEiJ_G0022539	Bms1	99	83.956	ENSCHIG00000023251	BMS1	99	84.190	Capra_hircus
MGP_PahariEiJ_G0022539	Bms1	99	80.655	ENSCAPG00000008652	BMS1	99	80.484	Cavia_aperea
MGP_PahariEiJ_G0022539	Bms1	99	84.009	ENSCPOG00000000502	BMS1	99	84.075	Cavia_porcellus
MGP_PahariEiJ_G0022539	Bms1	99	70.428	ENSCCAG00000024969	-	99	70.350	Cebus_capucinus
MGP_PahariEiJ_G0022539	Bms1	90	64.471	ENSCATG00000008695	-	96	63.478	Cercocebus_atys
MGP_PahariEiJ_G0022539	Bms1	99	85.280	ENSCATG00000030625	-	99	84.891	Cercocebus_atys
MGP_PahariEiJ_G0022539	Bms1	99	84.633	ENSCLAG00000002446	BMS1	99	84.165	Chinchilla_lanigera
MGP_PahariEiJ_G0022539	Bms1	99	85.903	ENSCSAG00000011118	BMS1	99	85.514	Chlorocebus_sabaeus
MGP_PahariEiJ_G0022539	Bms1	99	82.751	ENSCHOG00000011055	BMS1	99	82.984	Choloepus_hoffmanni
MGP_PahariEiJ_G0022539	Bms1	99	73.071	ENSCPBG00000025581	BMS1	99	73.027	Chrysemys_picta_bellii
MGP_PahariEiJ_G0022539	Bms1	79	58.838	ENSCING00000003181	-	96	59.113	Ciona_intestinalis
MGP_PahariEiJ_G0022539	Bms1	69	53.976	ENSCSAVG00000004113	-	88	53.738	Ciona_savignyi
MGP_PahariEiJ_G0022539	Bms1	99	86.604	ENSCANG00000011609	BMS1	99	85.592	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022539	Bms1	100	91.220	ENSCGRG00001019461	Bms1	100	91.064	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022539	Bms1	100	91.220	ENSCGRG00000009016	Bms1	99	91.064	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022539	Bms1	85	67.737	ENSCVAG00000008371	bms1	98	66.272	Cyprinodon_variegatus
MGP_PahariEiJ_G0022539	Bms1	88	66.561	ENSDARG00000054154	bms1	98	61.159	Danio_rerio
MGP_PahariEiJ_G0022539	Bms1	99	83.966	ENSDNOG00000015761	BMS1	99	83.566	Dasypus_novemcinctus
MGP_PahariEiJ_G0022539	Bms1	99	84.891	ENSDORG00000002982	Bms1	99	84.891	Dipodomys_ordii
MGP_PahariEiJ_G0022539	Bms1	76	60.533	FBgn0036686	CG7728	90	59.102	Drosophila_melanogaster
MGP_PahariEiJ_G0022539	Bms1	86	83.929	ENSETEG00000009554	BMS1	91	83.929	Echinops_telfairi
MGP_PahariEiJ_G0022539	Bms1	99	84.825	ENSEASG00005006894	BMS1	99	85.681	Equus_asinus_asinus
MGP_PahariEiJ_G0022539	Bms1	99	85.136	ENSECAG00000001358	BMS1	99	85.837	Equus_caballus
MGP_PahariEiJ_G0022539	Bms1	91	66.098	ENSELUG00000001756	bms1	91	68.705	Esox_lucius
MGP_PahariEiJ_G0022539	Bms1	99	85.892	ENSFCAG00000011220	BMS1	99	85.737	Felis_catus
MGP_PahariEiJ_G0022539	Bms1	99	70.704	ENSFALG00000006882	BMS1	99	70.579	Ficedula_albicollis
MGP_PahariEiJ_G0022539	Bms1	99	83.398	ENSFDAG00000001422	BMS1	99	82.592	Fukomys_damarensis
MGP_PahariEiJ_G0022539	Bms1	85	68.724	ENSFHEG00000003367	bms1	96	66.732	Fundulus_heteroclitus
MGP_PahariEiJ_G0022539	Bms1	93	63.780	ENSGMOG00000000718	bms1	86	74.747	Gadus_morhua
MGP_PahariEiJ_G0022539	Bms1	99	70.427	ENSGALG00000002624	BMS1	99	71.067	Gallus_gallus
MGP_PahariEiJ_G0022539	Bms1	89	65.397	ENSGACG00000015334	bms1	89	65.294	Gasterosteus_aculeatus
MGP_PahariEiJ_G0022539	Bms1	99	72.763	ENSGAGG00000003467	BMS1	99	72.175	Gopherus_agassizii
MGP_PahariEiJ_G0022539	Bms1	92	66.863	ENSHBUG00000022628	bms1	98	61.544	Haplochromis_burtoni
MGP_PahariEiJ_G0022539	Bms1	99	82.279	ENSHGLG00000000477	BMS1	99	81.444	Heterocephalus_glaber_female
MGP_PahariEiJ_G0022539	Bms1	99	82.385	ENSHGLG00100002176	BMS1	99	81.522	Heterocephalus_glaber_male
MGP_PahariEiJ_G0022539	Bms1	90	66.613	ENSHCOG00000017604	bms1	95	66.469	Hippocampus_comes
MGP_PahariEiJ_G0022539	Bms1	99	59.894	ENSIPUG00000017855	bms1	99	60.350	Ictalurus_punctatus
MGP_PahariEiJ_G0022539	Bms1	99	85.748	ENSSTOG00000015063	BMS1	99	85.358	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022539	Bms1	100	84.903	ENSJJAG00000017328	Bms1	99	85.023	Jaculus_jaculus
MGP_PahariEiJ_G0022539	Bms1	57	64.607	ENSKMAG00000021982	bms1	89	66.203	Kryptolebias_marmoratus
MGP_PahariEiJ_G0022539	Bms1	88	66.561	ENSLBEG00000028208	bms1	98	63.557	Labrus_bergylta
MGP_PahariEiJ_G0022539	Bms1	99	61.253	ENSLACG00000001600	BMS1	100	60.380	Latimeria_chalumnae
MGP_PahariEiJ_G0022539	Bms1	84	74.607	ENSLOCG00000012914	bms1	99	62.974	Lepisosteus_oculatus
MGP_PahariEiJ_G0022539	Bms1	99	82.179	ENSLAFG00000006250	BMS1	99	82.802	Loxodonta_africana
MGP_PahariEiJ_G0022539	Bms1	82	88.932	ENSMFAG00000037771	BMS1	97	88.544	Macaca_fascicularis
MGP_PahariEiJ_G0022539	Bms1	90	72.429	ENSMMUG00000007426	-	98	71.268	Macaca_mulatta
MGP_PahariEiJ_G0022539	Bms1	85	66.363	ENSMLEG00000029084	-	97	66.299	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022539	Bms1	99	62.037	ENSMAMG00000020855	bms1	87	71.795	Mastacembelus_armatus
MGP_PahariEiJ_G0022539	Bms1	92	66.996	ENSMZEG00005005663	bms1	98	61.042	Maylandia_zebra
MGP_PahariEiJ_G0022539	Bms1	95	70.934	ENSMGAG00000001170	BMS1	99	70.385	Meleagris_gallopavo
MGP_PahariEiJ_G0022539	Bms1	100	91.213	ENSMAUG00000002195	Bms1	100	90.202	Mesocricetus_auratus
MGP_PahariEiJ_G0022539	Bms1	99	84.370	ENSMICG00000009977	BMS1	99	84.526	Microcebus_murinus
MGP_PahariEiJ_G0022539	Bms1	100	90.039	ENSMOCG00000002038	Bms1	99	89.961	Microtus_ochrogaster
MGP_PahariEiJ_G0022539	Bms1	85	67.975	ENSMMOG00000000977	bms1	97	66.272	Mola_mola
MGP_PahariEiJ_G0022539	Bms1	99	76.480	ENSMODG00000001177	BMS1	99	76.336	Monodelphis_domestica
MGP_PahariEiJ_G0022539	Bms1	98	60.790	ENSMALG00000009680	bms1	94	66.934	Monopterus_albus
MGP_PahariEiJ_G0022539	Bms1	74	98.786	MGP_CAROLIEiJ_G0028785	-	86	98.786	Mus_caroli
MGP_PahariEiJ_G0022539	Bms1	100	95.483	ENSMUSG00000030138	Bms1	100	95.483	Mus_musculus
MGP_PahariEiJ_G0022539	Bms1	99	95.401	MGP_SPRETEiJ_G0029816	Bms1	99	95.401	Mus_spretus
MGP_PahariEiJ_G0022539	Bms1	99	84.961	ENSMPUG00000017276	BMS1	99	83.655	Mustela_putorius_furo
MGP_PahariEiJ_G0022539	Bms1	99	83.956	ENSMLUG00000003260	BMS1	99	83.801	Myotis_lucifugus
MGP_PahariEiJ_G0022539	Bms1	99	75.798	ENSNGAG00000015258	Bms1	96	86.916	Nannospalax_galili
MGP_PahariEiJ_G0022539	Bms1	99	83.567	ENSNLEG00000015791	BMS1	99	83.333	Nomascus_leucogenys
MGP_PahariEiJ_G0022539	Bms1	81	94.524	ENSOPRG00000005195	BMS1	81	94.524	Ochotona_princeps
MGP_PahariEiJ_G0022539	Bms1	100	83.515	ENSODEG00000005554	BMS1	100	83.593	Octodon_degus
MGP_PahariEiJ_G0022539	Bms1	96	66.296	ENSONIG00000007227	bms1	98	61.622	Oreochromis_niloticus
MGP_PahariEiJ_G0022539	Bms1	99	74.379	ENSOANG00000000662	-	99	74.534	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022539	Bms1	99	84.567	ENSOCUG00000005354	BMS1	99	84.424	Oryctolagus_cuniculus
MGP_PahariEiJ_G0022539	Bms1	88	68.019	ENSORLG00000014655	bms1	98	68.167	Oryzias_latipes
MGP_PahariEiJ_G0022539	Bms1	88	67.311	ENSORLG00020016246	bms1	98	61.472	Oryzias_latipes_hni
MGP_PahariEiJ_G0022539	Bms1	88	68.506	ENSOMEG00000015042	bms1	94	68.498	Oryzias_melastigma
MGP_PahariEiJ_G0022539	Bms1	99	85.105	ENSOGAG00000006511	BMS1	99	84.794	Otolemur_garnettii
MGP_PahariEiJ_G0022539	Bms1	99	83.929	ENSOARG00000003900	BMS1	99	84.006	Ovis_aries
MGP_PahariEiJ_G0022539	Bms1	99	81.556	ENSPPAG00000027837	BMS1	99	81.401	Pan_paniscus
MGP_PahariEiJ_G0022539	Bms1	99	85.892	ENSPPRG00000001311	BMS1	99	85.737	Panthera_pardus
MGP_PahariEiJ_G0022539	Bms1	99	83.788	ENSPTIG00000009652	BMS1	99	83.554	Panthera_tigris_altaica
MGP_PahariEiJ_G0022539	Bms1	99	85.214	ENSPTRG00000002441	BMS1	99	85.125	Pan_troglodytes
MGP_PahariEiJ_G0022539	Bms1	99	72.018	ENSPSIG00000006481	BMS1	98	72.593	Pelodiscus_sinensis
MGP_PahariEiJ_G0022539	Bms1	100	84.137	ENSPEMG00000022467	Bms1	100	83.904	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022539	Bms1	95	90.604	ENSPCIG00000001339	BMS1	98	86.197	Phascolarctos_cinereus
MGP_PahariEiJ_G0022539	Bms1	86	66.042	ENSPFOG00000015180	bms1	99	61.578	Poecilia_formosa
MGP_PahariEiJ_G0022539	Bms1	85	66.505	ENSPMEG00000023176	bms1	89	67.095	Poecilia_mexicana
MGP_PahariEiJ_G0022539	Bms1	85	67.045	ENSPREG00000002695	bms1	94	66.774	Poecilia_reticulata
MGP_PahariEiJ_G0022539	Bms1	61	81.178	ENSPPYG00000002836	-	99	81.434	Pongo_abelii
MGP_PahariEiJ_G0022539	Bms1	73	93.878	ENSPCAG00000014528	BMS1	73	93.878	Procavia_capensis
MGP_PahariEiJ_G0022539	Bms1	95	81.326	ENSPCOG00000023834	-	99	81.811	Propithecus_coquereli
MGP_PahariEiJ_G0022539	Bms1	99	82.761	ENSPVAG00000000725	BMS1	99	82.527	Pteropus_vampyrus
MGP_PahariEiJ_G0022539	Bms1	97	60.945	ENSPNYG00000018866	bms1	98	60.998	Pundamilia_nyererei
MGP_PahariEiJ_G0022539	Bms1	82	92.366	ENSRNOG00000006576	Bms1	100	92.844	Rattus_norvegicus
MGP_PahariEiJ_G0022539	Bms1	99	83.879	ENSRROG00000040101	BMS1	99	83.723	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022539	Bms1	74	45.577	YPL217C	-	80	47.945	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0022539	Bms1	99	85.681	ENSSBOG00000035778	BMS1	99	86.215	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022539	Bms1	99	75.346	ENSSHAG00000005062	BMS1	99	75.362	Sarcophilus_harrisii
MGP_PahariEiJ_G0022539	Bms1	92	64.107	ENSSFOG00015022313	bms1	59	57.475	Scleropages_formosus
MGP_PahariEiJ_G0022539	Bms1	90	65.815	ENSSMAG00000019966	bms1	98	59.846	Scophthalmus_maximus
MGP_PahariEiJ_G0022539	Bms1	88	66.881	ENSSDUG00000016875	bms1	84	65.774	Seriola_dumerili
MGP_PahariEiJ_G0022539	Bms1	88	67.524	ENSSLDG00000015199	bms1	53	65.257	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022539	Bms1	70	72.636	ENSSARG00000014407	BMS1	100	72.308	Sorex_araneus
MGP_PahariEiJ_G0022539	Bms1	99	71.341	ENSSPUG00000014454	BMS1	99	71.275	Sphenodon_punctatus
MGP_PahariEiJ_G0022539	Bms1	99	85.413	ENSSSCG00000010198	BMS1	99	85.491	Sus_scrofa
MGP_PahariEiJ_G0022539	Bms1	99	71.067	ENSTGUG00000006302	-	99	70.665	Taeniopygia_guttata
MGP_PahariEiJ_G0022539	Bms1	87	63.340	ENSTRUG00000008028	bms1	94	63.944	Takifugu_rubripes
MGP_PahariEiJ_G0022539	Bms1	60	90.551	ENSTBEG00000001673	-	64	90.551	Tupaia_belangeri
MGP_PahariEiJ_G0022539	Bms1	99	81.931	ENSTTRG00000007983	BMS1	99	81.931	Tursiops_truncatus
MGP_PahariEiJ_G0022539	Bms1	99	85.370	ENSUAMG00000023996	BMS1	99	85.214	Ursus_americanus
MGP_PahariEiJ_G0022539	Bms1	99	85.214	ENSUMAG00000016523	BMS1	99	85.058	Ursus_maritimus
MGP_PahariEiJ_G0022539	Bms1	88	78.227	ENSVPAG00000007477	BMS1	99	79.049	Vicugna_pacos
MGP_PahariEiJ_G0022539	Bms1	99	84.047	ENSVVUG00000021305	BMS1	99	85.226	Vulpes_vulpes
MGP_PahariEiJ_G0022539	Bms1	98	64.381	ENSXETG00000008158	bms1	99	65.275	Xenopus_tropicalis
MGP_PahariEiJ_G0022539	Bms1	86	66.944	ENSXCOG00000000506	bms1	93	75.949	Xiphophorus_couchianus
MGP_PahariEiJ_G0022539	Bms1	85	66.558	ENSXMAG00000014236	bms1	98	64.797	Xiphophorus_maculatus