EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022842 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 721 bases
Position: chr20:1048053-1048773
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0053356	Ribosomal_L13e	PF01294.18	2.1e-18	1	2
MGP_PahariEiJ_P0053356	Ribosomal_L13e	PF01294.18	2.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0053356	-	512	-	MGP_PahariEiJ_P0053356	117 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0022842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0022842	-	100	89.552	MGP_PahariEiJ_G0023274	Rpl13	59	89.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022842	-	100	88.060	ENSG00000167526	RPL13	72	88.060	Homo_sapiens
MGP_PahariEiJ_G0022842	-	81	89.655	ENSAMEG00000001111	RPL13	91	55.000	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022842	-	81	86.207	ENSATEG00000004902	rpl13	50	86.486	Anabas_testudineus
MGP_PahariEiJ_G0022842	-	81	89.655	ENSACAG00000017072	RPL13	72	82.090	Anolis_carolinensis
MGP_PahariEiJ_G0022842	-	100	88.060	ENSANAG00000030539	RPL13	72	88.060	Aotus_nancymaae
MGP_PahariEiJ_G0022842	-	81	86.207	ENSAMXG00000006495	rpl13	72	76.119	Astyanax_mexicanus
MGP_PahariEiJ_G0022842	-	100	80.597	ENSBTAG00000033143	-	71	80.597	Bos_taurus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSBTAG00000012044	RPL13	52	89.552	Bos_taurus
MGP_PahariEiJ_G0022842	-	87	54.054	WBGene00004425	rpl-13	50	54.054	Caenorhabditis_elegans
MGP_PahariEiJ_G0022842	-	100	88.060	ENSCJAG00000009672	-	72	88.060	Callithrix_jacchus
MGP_PahariEiJ_G0022842	-	100	86.567	ENSCJAG00000016268	-	72	86.567	Callithrix_jacchus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSCAFG00000019840	RPL13	72	89.552	Canis_familiaris
MGP_PahariEiJ_G0022842	-	100	89.552	ENSCAFG00020005125	RPL13	72	89.552	Canis_lupus_dingo
MGP_PahariEiJ_G0022842	-	100	89.552	ENSCHIG00000001441	-	72	89.552	Capra_hircus
MGP_PahariEiJ_G0022842	-	81	89.655	ENSTSYG00000027423	RPL13	72	89.552	Carlito_syrichta
MGP_PahariEiJ_G0022842	-	100	89.552	ENSCPOG00000027348	RPL13	72	89.552	Cavia_porcellus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSCCAG00000024248	RPL13	72	88.060	Cebus_capucinus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSCATG00000042426	RPL13	72	89.552	Cercocebus_atys
MGP_PahariEiJ_G0022842	-	100	42.286	ENSCATG00000038806	-	88	41.143	Cercocebus_atys
MGP_PahariEiJ_G0022842	-	100	89.552	ENSCLAG00000003801	RPL13	72	89.552	Chinchilla_lanigera
MGP_PahariEiJ_G0022842	-	100	89.552	ENSCSAG00000000476	-	59	89.552	Chlorocebus_sabaeus
MGP_PahariEiJ_G0022842	-	81	86.207	ENSCPBG00000013618	RPL13	72	85.075	Chrysemys_picta_bellii
MGP_PahariEiJ_G0022842	-	100	56.716	ENSCING00000002582	-	56	56.716	Ciona_intestinalis
MGP_PahariEiJ_G0022842	-	100	53.731	ENSCSAVG00000007075	-	57	53.731	Ciona_savignyi
MGP_PahariEiJ_G0022842	-	100	88.060	ENSCGRG00001022563	Rpl13	72	88.060	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022842	-	97	84.375	ENSCGRG00001023328	-	58	84.375	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022842	-	100	88.060	ENSCGRG00000014556	Rpl13	59	88.060	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022842	-	81	86.207	ENSDARG00000099380	rpl13	59	74.627	Danio_rerio
MGP_PahariEiJ_G0022842	-	100	88.060	ENSDNOG00000034247	RPL13	72	88.060	Dasypus_novemcinctus
MGP_PahariEiJ_G0022842	-	91	54.237	FBgn0011272	RpL13	51	54.237	Drosophila_melanogaster
MGP_PahariEiJ_G0022842	-	100	56.923	ENSETEG00000015057	-	60	68.966	Echinops_telfairi
MGP_PahariEiJ_G0022842	-	95	55.738	ENSETEG00000004518	-	64	55.738	Echinops_telfairi
MGP_PahariEiJ_G0022842	-	100	52.632	ENSEBUG00000000730	rpl13	58	52.632	Eptatretus_burgeri
MGP_PahariEiJ_G0022842	-	100	41.420	ENSEEUG00000006113	-	90	41.420	Erinaceus_europaeus
MGP_PahariEiJ_G0022842	-	81	82.759	ENSELUG00000014509	rpl13	59	74.627	Esox_lucius
MGP_PahariEiJ_G0022842	-	100	85.075	ENSFCAG00000003338	RPL13	72	85.075	Felis_catus
MGP_PahariEiJ_G0022842	-	100	77.612	ENSFALG00000003173	RPL13	72	77.612	Ficedula_albicollis
MGP_PahariEiJ_G0022842	-	100	89.552	ENSFDAG00000011310	RPL13	72	89.552	Fukomys_damarensis
MGP_PahariEiJ_G0022842	-	100	68.657	ENSGMOG00000002752	rpl13	58	68.657	Gadus_morhua
MGP_PahariEiJ_G0022842	-	100	82.090	ENSGALG00000006179	RPL13	72	82.090	Gallus_gallus
MGP_PahariEiJ_G0022842	-	81	86.207	ENSGAFG00000017260	rpl13	91	40.113	Gambusia_affinis
MGP_PahariEiJ_G0022842	-	100	76.119	ENSGACG00000015752	rpl13	59	76.119	Gasterosteus_aculeatus
MGP_PahariEiJ_G0022842	-	81	89.655	ENSGAGG00000003371	RPL13	72	83.582	Gopherus_agassizii
MGP_PahariEiJ_G0022842	-	100	46.369	ENSGGOG00000026762	-	91	46.369	Gorilla_gorilla
MGP_PahariEiJ_G0022842	-	100	88.060	ENSHGLG00000010880	RPL13	72	88.060	Heterocephalus_glaber_female
MGP_PahariEiJ_G0022842	-	100	88.060	ENSHGLG00100018449	RPL13	72	88.060	Heterocephalus_glaber_male
MGP_PahariEiJ_G0022842	-	100	73.134	ENSHCOG00000002997	rpl13	59	73.134	Hippocampus_comes
MGP_PahariEiJ_G0022842	-	81	86.207	ENSIPUG00000009775	rpl13	72	73.134	Ictalurus_punctatus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSSTOG00000011963	RPL13	58	89.552	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022842	-	96	83.871	ENSJJAG00000000236	-	57	83.871	Jaculus_jaculus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSJJAG00000014012	Rpl13	59	88.060	Jaculus_jaculus
MGP_PahariEiJ_G0022842	-	81	82.759	ENSKMAG00000006540	rpl13	59	80.597	Kryptolebias_marmoratus
MGP_PahariEiJ_G0022842	-	81	82.759	ENSLBEG00000026455	rpl13	59	74.627	Labrus_bergylta
MGP_PahariEiJ_G0022842	-	56	80.597	ENSLACG00000014843	-	50	80.597	Latimeria_chalumnae
MGP_PahariEiJ_G0022842	-	81	86.207	ENSLACG00000013768	rpl13	72	77.612	Latimeria_chalumnae
MGP_PahariEiJ_G0022842	-	56	68.657	ENSLACG00000005311	-	56	68.657	Latimeria_chalumnae
MGP_PahariEiJ_G0022842	-	81	86.207	ENSLOCG00000004063	rpl13	59	77.612	Lepisosteus_oculatus
MGP_PahariEiJ_G0022842	-	100	85.075	ENSLAFG00000004054	RPL13	59	85.075	Loxodonta_africana
MGP_PahariEiJ_G0022842	-	100	89.552	ENSMFAG00000027717	-	72	89.552	Macaca_fascicularis
MGP_PahariEiJ_G0022842	-	100	42.857	ENSMFAG00000046109	-	88	41.714	Macaca_fascicularis
MGP_PahariEiJ_G0022842	-	100	89.552	ENSMMUG00000017928	RPL13	72	89.552	Macaca_mulatta
MGP_PahariEiJ_G0022842	-	100	44.970	ENSMMUG00000038060	-	88	44.970	Macaca_mulatta
MGP_PahariEiJ_G0022842	-	100	42.286	ENSMNEG00000030483	-	88	41.143	Macaca_nemestrina
MGP_PahariEiJ_G0022842	-	100	43.103	ENSMLEG00000033776	-	88	41.954	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022842	-	100	58.710	ENSMLEG00000036728	-	90	63.514	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022842	-	80	89.286	ENSMAUG00000016802	-	50	86.567	Mesocricetus_auratus
MGP_PahariEiJ_G0022842	-	70	93.750	ENSMAUG00000020543	-	73	93.750	Mesocricetus_auratus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSMICG00000043954	-	72	89.552	Microcebus_murinus
MGP_PahariEiJ_G0022842	-	100	57.055	ENSMOCG00000011602	-	91	57.055	Microtus_ochrogaster
MGP_PahariEiJ_G0022842	-	100	85.075	ENSMOCG00000016985	-	70	85.075	Microtus_ochrogaster
MGP_PahariEiJ_G0022842	-	100	88.060	ENSMOCG00000002216	-	72	88.060	Microtus_ochrogaster
MGP_PahariEiJ_G0022842	-	100	89.552	ENSMOCG00000009058	-	59	89.552	Microtus_ochrogaster
MGP_PahariEiJ_G0022842	-	100	85.075	ENSMODG00000003663	RPL13	59	85.075	Monodelphis_domestica
MGP_PahariEiJ_G0022842	-	100	77.612	ENSMALG00000020934	rpl13	59	77.612	Monopterus_albus
MGP_PahariEiJ_G0022842	-	100	89.552	MGP_CAROLIEiJ_G0031676	Rpl13	59	89.552	Mus_caroli
MGP_PahariEiJ_G0022842	-	100	89.552	ENSMUSG00000000740	Rpl13	59	89.552	Mus_musculus
MGP_PahariEiJ_G0022842	-	100	89.552	MGP_SPRETEiJ_G0032794	Rpl13	59	89.552	Mus_spretus
MGP_PahariEiJ_G0022842	-	100	88.060	MGP_SPRETEiJ_G0031839	-	59	88.060	Mus_spretus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSMLUG00000010950	RPL13	67	89.552	Myotis_lucifugus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSNGAG00000018467	Rpl13	59	89.552	Nannospalax_galili
MGP_PahariEiJ_G0022842	-	100	88.060	ENSNLEG00000015774	RPL13	72	88.060	Nomascus_leucogenys
MGP_PahariEiJ_G0022842	-	100	40.110	ENSNLEG00000028759	-	91	40.110	Nomascus_leucogenys
MGP_PahariEiJ_G0022842	-	81	89.655	ENSODEG00000019297	-	71	86.567	Octodon_degus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSODEG00000019458	-	59	88.060	Octodon_degus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSODEG00000019351	-	71	88.060	Octodon_degus
MGP_PahariEiJ_G0022842	-	100	86.567	ENSODEG00000020384	-	72	86.567	Octodon_degus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSODEG00000004235	-	72	88.060	Octodon_degus
MGP_PahariEiJ_G0022842	-	100	83.582	ENSODEG00000019915	-	72	83.582	Octodon_degus
MGP_PahariEiJ_G0022842	-	100	80.597	ENSOANG00000006729	RPL13	72	80.597	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSOCUG00000007536	-	70	88.060	Oryctolagus_cuniculus
MGP_PahariEiJ_G0022842	-	81	89.655	ENSOCUG00000022399	-	70	86.567	Oryctolagus_cuniculus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSOCUG00000024415	-	70	88.060	Oryctolagus_cuniculus
MGP_PahariEiJ_G0022842	-	81	86.207	ENSORLG00000007654	rpl13	64	77.612	Oryzias_latipes
MGP_PahariEiJ_G0022842	-	81	86.207	ENSORLG00015008108	rpl13	51	86.486	Oryzias_latipes_hsok
MGP_PahariEiJ_G0022842	-	81	86.207	ENSOMEG00000001728	rpl13	50	86.486	Oryzias_melastigma
MGP_PahariEiJ_G0022842	-	100	89.552	ENSOGAG00000026444	RPL13	59	89.552	Otolemur_garnettii
MGP_PahariEiJ_G0022842	-	100	85.075	ENSOARG00000003957	-	51	85.075	Ovis_aries
MGP_PahariEiJ_G0022842	-	100	77.273	ENSPPAG00000042590	-	68	77.273	Pan_paniscus
MGP_PahariEiJ_G0022842	-	100	45.251	ENSPPAG00000041631	-	91	44.134	Pan_paniscus
MGP_PahariEiJ_G0022842	-	100	85.075	ENSPPRG00000003949	RPL13	72	85.075	Panthera_pardus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSPTRG00000008480	RPL13	72	89.552	Pan_troglodytes
MGP_PahariEiJ_G0022842	-	100	77.273	ENSPTRG00000041770	-	70	77.273	Pan_troglodytes
MGP_PahariEiJ_G0022842	-	100	46.369	ENSPTRG00000047911	-	91	44.134	Pan_troglodytes
MGP_PahariEiJ_G0022842	-	100	89.552	ENSPANG00000031667	RPL13	72	89.552	Papio_anubis
MGP_PahariEiJ_G0022842	-	81	86.207	ENSPKIG00000001789	rpl13	59	80.597	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022842	-	81	89.655	ENSPSIG00000015634	RPL13	72	83.582	Pelodiscus_sinensis
MGP_PahariEiJ_G0022842	-	100	89.552	ENSPEMG00000010342	Rpl13	59	89.552	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022842	-	100	86.567	ENSPCAG00000015461	RPL13	59	86.567	Procavia_capensis
MGP_PahariEiJ_G0022842	-	100	89.552	ENSPCOG00000024647	RPL13	72	89.552	Propithecus_coquereli
MGP_PahariEiJ_G0022842	-	100	79.104	ENSPVAG00000015130	RPL13	72	79.104	Pteropus_vampyrus
MGP_PahariEiJ_G0022842	-	81	86.207	ENSPNAG00000002916	rpl13	72	77.612	Pygocentrus_nattereri
MGP_PahariEiJ_G0022842	-	100	88.060	ENSRNOG00000059545	AC114446.1	71	88.060	Rattus_norvegicus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSRNOG00000061438	LOC100360491	59	88.060	Rattus_norvegicus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSRNOG00000015335	Rpl13	59	88.060	Rattus_norvegicus
MGP_PahariEiJ_G0022842	-	100	83.582	ENSRNOG00000029227	AABR07054469.1	59	83.582	Rattus_norvegicus
MGP_PahariEiJ_G0022842	-	100	88.060	ENSRNOG00000055911	LOC100361259	59	88.060	Rattus_norvegicus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSRBIG00000031937	RPL13	72	89.552	Rhinopithecus_bieti
MGP_PahariEiJ_G0022842	-	100	44.000	ENSRBIG00000010434	-	81	42.857	Rhinopithecus_bieti
MGP_PahariEiJ_G0022842	-	100	44.000	ENSRROG00000025626	-	81	42.857	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022842	-	100	89.552	ENSRROG00000036999	-	72	89.552	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022842	-	100	88.060	ENSSBOG00000028589	-	72	88.060	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022842	-	99	52.096	ENSSBOG00000019618	-	93	52.096	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022842	-	81	73.333	ENSSHAG00000010433	-	64	73.333	Sarcophilus_harrisii
MGP_PahariEiJ_G0022842	-	81	86.207	ENSSFOG00015019594	rpl13	59	79.104	Scleropages_formosus
MGP_PahariEiJ_G0022842	-	100	76.119	ENSSMAG00000021443	rpl13	59	76.119	Scophthalmus_maximus
MGP_PahariEiJ_G0022842	-	52	89.655	ENSSPUG00000006904	RPL13	65	78.788	Sphenodon_punctatus
MGP_PahariEiJ_G0022842	-	97	42.353	ENSSSCG00000036198	-	94	41.176	Sus_scrofa
MGP_PahariEiJ_G0022842	-	100	86.567	ENSSSCG00000024974	RPL13	72	86.567	Sus_scrofa
MGP_PahariEiJ_G0022842	-	99	44.253	ENSSSCG00000029020	-	87	44.253	Sus_scrofa
MGP_PahariEiJ_G0022842	-	100	71.642	ENSSSCG00000003723	-	68	71.642	Sus_scrofa
MGP_PahariEiJ_G0022842	-	95	60.317	ENSSSCG00000033294	-	67	60.317	Sus_scrofa
MGP_PahariEiJ_G0022842	-	88	70.270	ENSSSCG00000007813	-	53	70.270	Sus_scrofa
MGP_PahariEiJ_G0022842	-	100	77.612	ENSTGUG00000007874	RPL13	72	77.612	Taeniopygia_guttata
MGP_PahariEiJ_G0022842	-	81	86.207	ENSTRUG00000021170	rpl13	59	76.119	Takifugu_rubripes
MGP_PahariEiJ_G0022842	-	81	82.759	ENSTNIG00000009349	rpl13	59	77.612	Tetraodon_nigroviridis
MGP_PahariEiJ_G0022842	-	100	89.552	ENSTTRG00000004374	RPL13	72	89.552	Tursiops_truncatus
MGP_PahariEiJ_G0022842	-	100	89.552	ENSUAMG00000020363	RPL13	72	89.552	Ursus_americanus
MGP_PahariEiJ_G0022842	-	56	85.075	ENSVPAG00000000569	-	54	85.075	Vicugna_pacos
MGP_PahariEiJ_G0022842	-	100	91.045	ENSVVUG00000003839	-	70	91.045	Vulpes_vulpes
MGP_PahariEiJ_G0022842	-	81	89.655	ENSXETG00000019835	rpl13	72	83.582	Xenopus_tropicalis