EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022917 (Gene tree)
Gene ID: 110337256
Gene Symbol: Farsa
Alias: 0610012A19Rik|Farsla
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 11586 bases
Position: chr20:9336452-9348037
Accession: 110337256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0053573	tRNA-synt_2d	PF01409.20	2.7e-90	1	1
MGP_PahariEiJ_P0053571	tRNA-synt_2d	PF01409.20	3.8e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0053575	-	704	-	-	- (aa)	-	-
MGP_PahariEiJ_T0053574	-	1709	-	MGP_PahariEiJ_P0053574	105 (aa)	-	-
MGP_PahariEiJ_T0053571	-	1827	XM_021220059	MGP_PahariEiJ_P0053571	508 (aa)	XP_021075718	UPI000A30D152
MGP_PahariEiJ_T0053573	-	1796	XM_021220060	MGP_PahariEiJ_P0053573	507 (aa)	XP_021075719	UPI000A31265C
MGP_PahariEiJ_T0053572	-	1921	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0022917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022917	Farsa	100	92.323	ENSG00000179115	FARSA	100	92.323	Homo_sapiens
MGP_PahariEiJ_G0022917	Farsa	98	76.411	ENSAPOG00000011465	farsa	99	76.411	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022917	Farsa	99	90.730	ENSAMEG00000012446	FARSA	99	90.730	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022917	Farsa	98	72.379	ENSACIG00000020499	farsa	99	72.379	Amphilophus_citrinellus
MGP_PahariEiJ_G0022917	Farsa	98	76.008	ENSAOCG00000000581	farsa	99	76.008	Amphiprion_ocellaris
MGP_PahariEiJ_G0022917	Farsa	98	75.806	ENSAPEG00000017695	farsa	99	75.806	Amphiprion_percula
MGP_PahariEiJ_G0022917	Farsa	98	69.556	ENSATEG00000012807	farsa	99	69.556	Anabas_testudineus
MGP_PahariEiJ_G0022917	Farsa	98	63.380	ENSATEG00000012633	farsa	99	63.380	Anabas_testudineus
MGP_PahariEiJ_G0022917	Farsa	96	79.919	ENSACAG00000017166	FARSA	81	80.208	Anolis_carolinensis
MGP_PahariEiJ_G0022917	Farsa	100	91.732	ENSANAG00000037420	FARSA	100	91.732	Aotus_nancymaae
MGP_PahariEiJ_G0022917	Farsa	98	76.815	ENSACLG00000001716	farsa	99	76.815	Astatotilapia_calliptera
MGP_PahariEiJ_G0022917	Farsa	98	78.831	ENSAMXG00000037912	farsa	99	78.831	Astyanax_mexicanus
MGP_PahariEiJ_G0022917	Farsa	100	91.142	ENSBTAG00000021374	FARSA	100	91.142	Bos_taurus
MGP_PahariEiJ_G0022917	Farsa	94	60.842	WBGene00001497	fars-1	95	60.842	Caenorhabditis_elegans
MGP_PahariEiJ_G0022917	Farsa	99	90.533	ENSCJAG00000004686	FARSA	100	85.827	Callithrix_jacchus
MGP_PahariEiJ_G0022917	Farsa	100	91.339	ENSCAFG00000017096	FARSA	100	91.339	Canis_familiaris
MGP_PahariEiJ_G0022917	Farsa	100	91.339	ENSCAFG00020005315	FARSA	100	91.339	Canis_lupus_dingo
MGP_PahariEiJ_G0022917	Farsa	100	85.380	ENSCHIG00000022617	FARSA	100	85.380	Capra_hircus
MGP_PahariEiJ_G0022917	Farsa	93	86.170	ENSTSYG00000002595	FARSA	85	86.170	Carlito_syrichta
MGP_PahariEiJ_G0022917	Farsa	91	91.522	ENSCAPG00000011353	FARSA	98	91.721	Cavia_aperea
MGP_PahariEiJ_G0022917	Farsa	100	91.535	ENSCPOG00000000787	FARSA	100	91.535	Cavia_porcellus
MGP_PahariEiJ_G0022917	Farsa	100	91.535	ENSCCAG00000028176	FARSA	100	91.535	Cebus_capucinus
MGP_PahariEiJ_G0022917	Farsa	100	91.142	ENSCLAG00000015489	FARSA	100	91.142	Chinchilla_lanigera
MGP_PahariEiJ_G0022917	Farsa	94	93.711	ENSCSAG00000006530	FARSA	100	93.711	Chlorocebus_sabaeus
MGP_PahariEiJ_G0022917	Farsa	94	81.172	ENSCPBG00000023915	FARSA	95	81.172	Chrysemys_picta_bellii
MGP_PahariEiJ_G0022917	Farsa	98	61.647	ENSCING00000002567	-	96	63.257	Ciona_intestinalis
MGP_PahariEiJ_G0022917	Farsa	98	62.450	ENSCSAVG00000010683	-	95	64.092	Ciona_savignyi
MGP_PahariEiJ_G0022917	Farsa	100	92.520	ENSCANG00000043649	-	100	92.520	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022917	Farsa	100	95.079	ENSCGRG00001019769	Farsa	100	95.079	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022917	Farsa	100	95.079	ENSCGRG00000013415	Farsa	100	95.079	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022917	Farsa	98	76.815	ENSCSEG00000016214	farsa	96	76.815	Cynoglossus_semilaevis
MGP_PahariEiJ_G0022917	Farsa	98	75.403	ENSCVAG00000007907	farsa	99	75.403	Cyprinodon_variegatus
MGP_PahariEiJ_G0022917	Farsa	98	77.621	ENSDARG00000098825	farsa	99	77.621	Danio_rerio
MGP_PahariEiJ_G0022917	Farsa	96	91.376	ENSDNOG00000032350	FARSA	99	91.376	Dasypus_novemcinctus
MGP_PahariEiJ_G0022917	Farsa	100	90.766	ENSDORG00000010118	Farsa	100	90.766	Dipodomys_ordii
MGP_PahariEiJ_G0022917	Farsa	97	62.753	FBgn0030007	alpha-PheRS	96	63.598	Drosophila_melanogaster
MGP_PahariEiJ_G0022917	Farsa	100	82.480	ENSETEG00000018673	FARSA	100	82.480	Echinops_telfairi
MGP_PahariEiJ_G0022917	Farsa	58	69.257	ENSEBUG00000008545	farsa	94	70.000	Eptatretus_burgeri
MGP_PahariEiJ_G0022917	Farsa	91	80.943	ENSEASG00005004093	FARSA	95	80.943	Equus_asinus_asinus
MGP_PahariEiJ_G0022917	Farsa	100	92.323	ENSECAG00000015139	FARSA	95	92.323	Equus_caballus
MGP_PahariEiJ_G0022917	Farsa	98	77.016	ENSELUG00000010183	farsa	99	77.016	Esox_lucius
MGP_PahariEiJ_G0022917	Farsa	100	91.535	ENSFCAG00000023511	FARSA	100	91.535	Felis_catus
MGP_PahariEiJ_G0022917	Farsa	99	90.533	ENSFDAG00000005987	FARSA	100	90.533	Fukomys_damarensis
MGP_PahariEiJ_G0022917	Farsa	98	76.815	ENSFHEG00000009382	farsa	94	76.815	Fundulus_heteroclitus
MGP_PahariEiJ_G0022917	Farsa	98	75.453	ENSGMOG00000018319	farsa	99	75.453	Gadus_morhua
MGP_PahariEiJ_G0022917	Farsa	96	75.051	ENSGALG00000040258	FARSA	84	75.783	Gallus_gallus
MGP_PahariEiJ_G0022917	Farsa	98	77.016	ENSGAFG00000014146	farsa	99	77.016	Gambusia_affinis
MGP_PahariEiJ_G0022917	Farsa	98	76.258	ENSGACG00000006278	farsa	99	76.258	Gasterosteus_aculeatus
MGP_PahariEiJ_G0022917	Farsa	97	80.242	ENSGAGG00000000753	FARSA	95	80.962	Gopherus_agassizii
MGP_PahariEiJ_G0022917	Farsa	99	92.505	ENSGGOG00000003418	FARSA	99	92.505	Gorilla_gorilla
MGP_PahariEiJ_G0022917	Farsa	98	76.815	ENSHBUG00000019852	farsa	99	76.815	Haplochromis_burtoni
MGP_PahariEiJ_G0022917	Farsa	99	91.270	ENSHGLG00000005213	FARSA	100	91.270	Heterocephalus_glaber_female
MGP_PahariEiJ_G0022917	Farsa	99	91.270	ENSHGLG00100009586	FARSA	99	91.270	Heterocephalus_glaber_male
MGP_PahariEiJ_G0022917	Farsa	98	75.605	ENSHCOG00000019548	farsa	99	75.605	Hippocampus_comes
MGP_PahariEiJ_G0022917	Farsa	98	78.024	ENSIPUG00000007635	farsa	99	78.024	Ictalurus_punctatus
MGP_PahariEiJ_G0022917	Farsa	99	90.927	ENSSTOG00000008748	FARSA	100	90.927	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022917	Farsa	98	77.016	ENSKMAG00000010698	farsa	99	77.016	Kryptolebias_marmoratus
MGP_PahariEiJ_G0022917	Farsa	98	76.411	ENSLBEG00000006757	-	99	76.411	Labrus_bergylta
MGP_PahariEiJ_G0022917	Farsa	84	73.176	ENSLBEG00000001258	farsa	97	73.176	Labrus_bergylta
MGP_PahariEiJ_G0022917	Farsa	91	77.970	ENSLOCG00000008389	farsa	96	77.970	Lepisosteus_oculatus
MGP_PahariEiJ_G0022917	Farsa	100	90.354	ENSLAFG00000016154	FARSA	100	90.354	Loxodonta_africana
MGP_PahariEiJ_G0022917	Farsa	100	92.717	ENSMFAG00000030595	FARSA	100	92.717	Macaca_fascicularis
MGP_PahariEiJ_G0022917	Farsa	100	92.717	ENSMMUG00000004390	FARSA	100	92.717	Macaca_mulatta
MGP_PahariEiJ_G0022917	Farsa	100	92.717	ENSMNEG00000043866	FARSA	100	92.717	Macaca_nemestrina
MGP_PahariEiJ_G0022917	Farsa	100	92.338	ENSMLEG00000029157	FARSA	100	92.338	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022917	Farsa	98	77.419	ENSMAMG00000010636	farsa	97	78.125	Mastacembelus_armatus
MGP_PahariEiJ_G0022917	Farsa	98	76.815	ENSMZEG00005002319	farsa	99	76.815	Maylandia_zebra
MGP_PahariEiJ_G0022917	Farsa	100	96.457	ENSMAUG00000009188	Farsa	100	96.457	Mesocricetus_auratus
MGP_PahariEiJ_G0022917	Farsa	100	92.323	ENSMICG00000016272	FARSA	100	92.323	Microcebus_murinus
MGP_PahariEiJ_G0022917	Farsa	100	96.063	ENSMOCG00000011399	Farsa	100	96.063	Microtus_ochrogaster
MGP_PahariEiJ_G0022917	Farsa	98	72.984	ENSMMOG00000006287	farsa	97	73.750	Mola_mola
MGP_PahariEiJ_G0022917	Farsa	98	85.282	ENSMODG00000011519	FARSA	100	85.282	Monodelphis_domestica
MGP_PahariEiJ_G0022917	Farsa	98	73.387	ENSMALG00000001972	farsa	95	78.571	Monopterus_albus
MGP_PahariEiJ_G0022917	Farsa	100	98.819	MGP_CAROLIEiJ_G0031312	Farsa	100	98.819	Mus_caroli
MGP_PahariEiJ_G0022917	Farsa	100	98.425	ENSMUSG00000003808	Farsa	100	98.425	Mus_musculus
MGP_PahariEiJ_G0022917	Farsa	100	98.622	MGP_SPRETEiJ_G0032431	Farsa	100	98.622	Mus_spretus
MGP_PahariEiJ_G0022917	Farsa	100	90.945	ENSMPUG00000004400	FARSA	100	90.945	Mustela_putorius_furo
MGP_PahariEiJ_G0022917	Farsa	99	90.514	ENSMLUG00000012767	FARSA	99	90.514	Myotis_lucifugus
MGP_PahariEiJ_G0022917	Farsa	73	95.664	ENSNGAG00000018353	Farsa	100	95.664	Nannospalax_galili
MGP_PahariEiJ_G0022917	Farsa	98	77.218	ENSNBRG00000010063	farsa	99	77.218	Neolamprologus_brichardi
MGP_PahariEiJ_G0022917	Farsa	100	91.535	ENSNLEG00000012899	FARSA	100	91.535	Nomascus_leucogenys
MGP_PahariEiJ_G0022917	Farsa	98	84.476	ENSMEUG00000014253	FARSA	97	85.417	Notamacropus_eugenii
MGP_PahariEiJ_G0022917	Farsa	100	90.945	ENSOPRG00000005004	FARSA	100	90.945	Ochotona_princeps
MGP_PahariEiJ_G0022917	Farsa	100	90.945	ENSODEG00000010433	FARSA	100	90.945	Octodon_degus
MGP_PahariEiJ_G0022917	Farsa	98	77.621	ENSONIG00000008075	farsa	99	77.621	Oreochromis_niloticus
MGP_PahariEiJ_G0022917	Farsa	98	76.210	ENSORLG00000016406	farsa	90	76.210	Oryzias_latipes
MGP_PahariEiJ_G0022917	Farsa	98	76.411	ENSORLG00020021978	farsa	99	76.411	Oryzias_latipes_hni
MGP_PahariEiJ_G0022917	Farsa	98	76.411	ENSORLG00015015045	farsa	99	76.411	Oryzias_latipes_hsok
MGP_PahariEiJ_G0022917	Farsa	98	76.210	ENSOMEG00000017367	farsa	97	76.210	Oryzias_melastigma
MGP_PahariEiJ_G0022917	Farsa	100	91.535	ENSOGAG00000012243	FARSA	100	91.535	Otolemur_garnettii
MGP_PahariEiJ_G0022917	Farsa	100	90.945	ENSOARG00000009991	FARSA	94	90.945	Ovis_aries
MGP_PahariEiJ_G0022917	Farsa	100	92.323	ENSPPAG00000034266	FARSA	100	92.323	Pan_paniscus
MGP_PahariEiJ_G0022917	Farsa	100	91.535	ENSPPRG00000000346	FARSA	100	91.535	Panthera_pardus
MGP_PahariEiJ_G0022917	Farsa	93	92.553	ENSPTIG00000011502	FARSA	97	92.553	Panthera_tigris_altaica
MGP_PahariEiJ_G0022917	Farsa	100	92.520	ENSPTRG00000010550	FARSA	100	92.520	Pan_troglodytes
MGP_PahariEiJ_G0022917	Farsa	100	92.520	ENSPANG00000010978	FARSA	100	87.402	Papio_anubis
MGP_PahariEiJ_G0022917	Farsa	98	75.202	ENSPKIG00000007170	farsa	99	76.613	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022917	Farsa	88	75.839	ENSPSIG00000012701	FARSA	99	74.836	Pelodiscus_sinensis
MGP_PahariEiJ_G0022917	Farsa	98	71.371	ENSPMGG00000001401	farsa	99	71.371	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0022917	Farsa	100	95.669	ENSPEMG00000012560	Farsa	100	95.669	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0022917	Farsa	98	75.202	ENSPMAG00000008453	farsa	97	76.042	Petromyzon_marinus
MGP_PahariEiJ_G0022917	Farsa	98	85.685	ENSPCIG00000019294	FARSA	99	85.685	Phascolarctos_cinereus
MGP_PahariEiJ_G0022917	Farsa	98	77.016	ENSPFOG00000001201	farsa	99	77.016	Poecilia_formosa
MGP_PahariEiJ_G0022917	Farsa	98	77.016	ENSPLAG00000018191	farsa	99	77.016	Poecilia_latipinna
MGP_PahariEiJ_G0022917	Farsa	98	77.218	ENSPMEG00000013547	farsa	99	77.218	Poecilia_mexicana
MGP_PahariEiJ_G0022917	Farsa	98	72.379	ENSPREG00000013620	farsa	99	72.379	Poecilia_reticulata
MGP_PahariEiJ_G0022917	Farsa	100	92.717	ENSPPYG00000009615	FARSA	100	92.717	Pongo_abelii
MGP_PahariEiJ_G0022917	Farsa	100	90.945	ENSPCAG00000015721	FARSA	100	90.945	Procavia_capensis
MGP_PahariEiJ_G0022917	Farsa	100	92.323	ENSPCOG00000014412	FARSA	100	92.323	Propithecus_coquereli
MGP_PahariEiJ_G0022917	Farsa	86	93.778	ENSPVAG00000014714	FARSA	86	93.778	Pteropus_vampyrus
MGP_PahariEiJ_G0022917	Farsa	98	76.815	ENSPNYG00000002144	farsa	99	76.815	Pundamilia_nyererei
MGP_PahariEiJ_G0022917	Farsa	98	78.427	ENSPNAG00000000869	farsa	99	78.427	Pygocentrus_nattereri
MGP_PahariEiJ_G0022917	Farsa	100	98.228	ENSRNOG00000003149	Farsa	100	98.228	Rattus_norvegicus
MGP_PahariEiJ_G0022917	Farsa	100	92.323	ENSRBIG00000025585	FARSA	100	92.323	Rhinopithecus_bieti
MGP_PahariEiJ_G0022917	Farsa	100	92.323	ENSRROG00000040046	FARSA	100	87.205	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022917	Farsa	91	50.000	YFL022C	FRS2	93	50.000	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0022917	Farsa	100	91.732	ENSSBOG00000031362	FARSA	100	91.732	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022917	Farsa	88	85.682	ENSSHAG00000015006	FARSA	100	85.682	Sarcophilus_harrisii
MGP_PahariEiJ_G0022917	Farsa	98	75.605	ENSSFOG00015014864	farsa	99	75.605	Scleropages_formosus
MGP_PahariEiJ_G0022917	Farsa	98	76.613	ENSSMAG00000002358	farsa	99	76.613	Scophthalmus_maximus
MGP_PahariEiJ_G0022917	Farsa	98	75.605	ENSSDUG00000008631	farsa	99	75.605	Seriola_dumerili
MGP_PahariEiJ_G0022917	Farsa	98	75.605	ENSSLDG00000017108	farsa	99	75.605	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022917	Farsa	66	96.970	ENSSARG00000006579	-	70	89.644	Sorex_araneus
MGP_PahariEiJ_G0022917	Farsa	88	66.592	ENSSPUG00000012509	FARSA	96	66.966	Sphenodon_punctatus
MGP_PahariEiJ_G0022917	Farsa	98	76.613	ENSSPAG00000018292	farsa	92	76.613	Stegastes_partitus
MGP_PahariEiJ_G0022917	Farsa	100	90.945	ENSSSCG00000013745	FARSA	100	90.945	Sus_scrofa
MGP_PahariEiJ_G0022917	Farsa	98	67.273	ENSTRUG00000010624	farsa	99	67.273	Takifugu_rubripes
MGP_PahariEiJ_G0022917	Farsa	98	70.766	ENSTNIG00000008330	farsa	99	70.766	Tetraodon_nigroviridis
MGP_PahariEiJ_G0022917	Farsa	90	88.017	ENSTBEG00000000396	FARSA	100	88.017	Tupaia_belangeri
MGP_PahariEiJ_G0022917	Farsa	87	89.698	ENSTTRG00000003599	FARSA	87	89.698	Tursiops_truncatus
MGP_PahariEiJ_G0022917	Farsa	99	90.730	ENSUAMG00000010230	FARSA	99	90.730	Ursus_americanus
MGP_PahariEiJ_G0022917	Farsa	99	90.533	ENSUMAG00000006110	FARSA	99	90.533	Ursus_maritimus
MGP_PahariEiJ_G0022917	Farsa	100	91.339	ENSVVUG00000024145	FARSA	100	91.339	Vulpes_vulpes
MGP_PahariEiJ_G0022917	Farsa	98	75.952	ENSXETG00000007936	farsa	99	74.950	Xenopus_tropicalis
MGP_PahariEiJ_G0022917	Farsa	98	68.612	ENSXCOG00000015512	farsa	99	68.612	Xiphophorus_couchianus
MGP_PahariEiJ_G0022917	Farsa	98	75.806	ENSXMAG00000008832	farsa	99	75.806	Xiphophorus_maculatus