EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022961 (Gene tree)
Gene ID: 110337441
Gene Symbol: Sall1
Alias: Msal-3
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 16941 bases
Position: chr20:13364803-13381743
Accession: 110337441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0053735	zf-C2H2	PF00096.26	7.7e-34	1	6
MGP_PahariEiJ_P0053735	zf-C2H2	PF00096.26	7.7e-34	2	6
MGP_PahariEiJ_P0053735	zf-C2H2	PF00096.26	7.7e-34	3	6
MGP_PahariEiJ_P0053735	zf-C2H2	PF00096.26	7.7e-34	4	6
MGP_PahariEiJ_P0053735	zf-C2H2	PF00096.26	7.7e-34	5	6
MGP_PahariEiJ_P0053735	zf-C2H2	PF00096.26	7.7e-34	6	6
MGP_PahariEiJ_P0053735	zf-met	PF12874.7	1.5e-24	1	5
MGP_PahariEiJ_P0053735	zf-met	PF12874.7	1.5e-24	2	5
MGP_PahariEiJ_P0053735	zf-met	PF12874.7	1.5e-24	3	5
MGP_PahariEiJ_P0053735	zf-met	PF12874.7	1.5e-24	4	5
MGP_PahariEiJ_P0053735	zf-met	PF12874.7	1.5e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0053735	-	5252	XM_021220359	MGP_PahariEiJ_P0053735	1323 (aa)	XP_021076018	UPI000A3054E6

Gene Model

Click here to download MGP_PahariEiJ_G0022961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0022961	Sall1	95	64.706	MGP_PahariEiJ_G0026164	Sall4	95	64.706
MGP_PahariEiJ_G0022961	Sall1	99	65.306	MGP_PahariEiJ_G0019170	Sall3	99	65.306
MGP_PahariEiJ_G0022961	Sall1	66	53.704	MGP_PahariEiJ_G0019173	Zfp236	77	53.704
MGP_PahariEiJ_G0022961	Sall1	68	59.615	MGP_PahariEiJ_G0030262	Sall2	62	59.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022961	Sall1	100	89.970	ENSG00000103449	SALL1	100	90.236	Homo_sapiens
MGP_PahariEiJ_G0022961	Sall1	100	67.459	ENSAPOG00000022764	sall1a	99	67.139	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022961	Sall1	100	88.604	ENSAMEG00000006817	SALL1	100	88.679	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022961	Sall1	100	66.344	ENSACIG00000004231	sall1a	99	65.996	Amphilophus_citrinellus
MGP_PahariEiJ_G0022961	Sall1	100	67.385	ENSAOCG00000002800	sall1a	99	67.064	Amphiprion_ocellaris
MGP_PahariEiJ_G0022961	Sall1	100	67.385	ENSAPEG00000010179	sall1a	99	67.064	Amphiprion_percula
MGP_PahariEiJ_G0022961	Sall1	100	66.469	ENSATEG00000003006	sall1a	100	66.454	Anabas_testudineus
MGP_PahariEiJ_G0022961	Sall1	100	82.491	ENSAPLG00000003356	SALL1	99	82.779	Anas_platyrhynchos
MGP_PahariEiJ_G0022961	Sall1	99	79.696	ENSACAG00000014399	SALL1	96	79.680	Anolis_carolinensis
MGP_PahariEiJ_G0022961	Sall1	100	90.573	ENSANAG00000027238	SALL1	100	90.573	Aotus_nancymaae
MGP_PahariEiJ_G0022961	Sall1	100	66.716	ENSACLG00000017148	sall1a	99	66.270	Astatotilapia_calliptera
MGP_PahariEiJ_G0022961	Sall1	100	67.511	ENSAMXG00000018599	sall1a	99	66.916	Astyanax_mexicanus
MGP_PahariEiJ_G0022961	Sall1	99	50.625	ENSAMXG00000017702	sall1b	99	51.373	Astyanax_mexicanus
MGP_PahariEiJ_G0022961	Sall1	100	88.311	ENSBTAG00000008544	SALL1	100	88.395	Bos_taurus
MGP_PahariEiJ_G0022961	Sall1	100	90.573	ENSCJAG00000001740	SALL1	100	90.649	Callithrix_jacchus
MGP_PahariEiJ_G0022961	Sall1	100	89.224	ENSCAFG00000009755	SALL1	100	89.601	Canis_familiaris
MGP_PahariEiJ_G0022961	Sall1	100	89.224	ENSCAFG00020002842	SALL1	100	89.601	Canis_lupus_dingo
MGP_PahariEiJ_G0022961	Sall1	100	87.717	ENSCHIG00000026074	SALL1	100	87.877	Capra_hircus
MGP_PahariEiJ_G0022961	Sall1	100	90.491	ENSTSYG00000029464	SALL1	100	90.264	Carlito_syrichta
MGP_PahariEiJ_G0022961	Sall1	98	90.608	ENSCPOG00000006564	SALL1	100	90.300	Cavia_porcellus
MGP_PahariEiJ_G0022961	Sall1	100	87.557	ENSCCAG00000001639	SALL1	100	87.557	Cebus_capucinus
MGP_PahariEiJ_G0022961	Sall1	100	90.196	ENSCATG00000004982	SALL1	100	90.347	Cercocebus_atys
MGP_PahariEiJ_G0022961	Sall1	100	90.566	ENSCLAG00000006380	SALL1	100	90.566	Chinchilla_lanigera
MGP_PahariEiJ_G0022961	Sall1	100	89.367	ENSCSAG00000005319	SALL1	100	89.442	Chlorocebus_sabaeus
MGP_PahariEiJ_G0022961	Sall1	67	93.676	ENSCHOG00000000800	-	69	93.676	Choloepus_hoffmanni
MGP_PahariEiJ_G0022961	Sall1	100	82.868	ENSCPBG00000015924	SALL1	99	83.700	Chrysemys_picta_bellii
MGP_PahariEiJ_G0022961	Sall1	100	90.045	ENSCANG00000036664	SALL1	100	90.561	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022961	Sall1	100	93.197	ENSCGRG00001023314	-	100	92.819	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022961	Sall1	98	93.061	ENSCGRG00000009496	Sall1	100	92.675	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022961	Sall1	100	65.134	ENSCSEG00000009349	sall1a	100	65.504	Cynoglossus_semilaevis
MGP_PahariEiJ_G0022961	Sall1	90	65.833	ENSCVAG00000020513	sall1a	99	65.304	Cyprinodon_variegatus
MGP_PahariEiJ_G0022961	Sall1	100	67.311	ENSDARG00000074319	sall1a	99	67.388	Danio_rerio
MGP_PahariEiJ_G0022961	Sall1	99	46.040	ENSDARG00000075891	sall1b	99	45.932	Danio_rerio
MGP_PahariEiJ_G0022961	Sall1	100	87.867	ENSDNOG00000016413	SALL1	100	88.018	Dasypus_novemcinctus
MGP_PahariEiJ_G0022961	Sall1	98	87.760	ENSETEG00000015150	SALL1	100	87.837	Echinops_telfairi
MGP_PahariEiJ_G0022961	Sall1	99	37.034	ENSEBUG00000008798	SALL1	68	44.176	Eptatretus_burgeri
MGP_PahariEiJ_G0022961	Sall1	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
MGP_PahariEiJ_G0022961	Sall1	100	89.736	ENSEASG00005014602	SALL1	100	89.585	Equus_asinus_asinus
MGP_PahariEiJ_G0022961	Sall1	91	87.427	ENSECAG00000011334	SALL1	99	87.261	Equus_caballus
MGP_PahariEiJ_G0022961	Sall1	98	87.988	ENSEEUG00000002014	SALL1	100	87.874	Erinaceus_europaeus
MGP_PahariEiJ_G0022961	Sall1	99	50.852	ENSELUG00000017774	-	99	50.037	Esox_lucius
MGP_PahariEiJ_G0022961	Sall1	100	63.611	ENSELUG00000006159	sall1a	99	63.610	Esox_lucius
MGP_PahariEiJ_G0022961	Sall1	100	87.943	ENSFCAG00000024654	SALL1	100	88.293	Felis_catus
MGP_PahariEiJ_G0022961	Sall1	100	81.585	ENSFALG00000000074	SALL1	99	81.949	Ficedula_albicollis
MGP_PahariEiJ_G0022961	Sall1	72	63.462	ENSFHEG00000008424	-	99	62.802	Fundulus_heteroclitus
MGP_PahariEiJ_G0022961	Sall1	100	66.418	ENSFHEG00000012579	sall1a	99	66.320	Fundulus_heteroclitus
MGP_PahariEiJ_G0022961	Sall1	100	64.915	ENSGMOG00000006103	sall1a	99	64.833	Gadus_morhua
MGP_PahariEiJ_G0022961	Sall1	97	41.919	ENSGMOG00000013383	-	99	41.746	Gadus_morhua
MGP_PahariEiJ_G0022961	Sall1	99	82.175	ENSGALG00000039238	SALL1	99	82.477	Gallus_gallus
MGP_PahariEiJ_G0022961	Sall1	100	66.939	ENSGAFG00000009964	sall1a	99	66.964	Gambusia_affinis
MGP_PahariEiJ_G0022961	Sall1	100	65.356	ENSGACG00000016702	sall1a	100	65.803	Gasterosteus_aculeatus
MGP_PahariEiJ_G0022961	Sall1	100	82.415	ENSGAGG00000013979	SALL1	99	83.537	Gopherus_agassizii
MGP_PahariEiJ_G0022961	Sall1	100	90.196	ENSGGOG00000000663	SALL1	100	90.196	Gorilla_gorilla
MGP_PahariEiJ_G0022961	Sall1	100	66.716	ENSHBUG00000022005	sall1a	99	66.270	Haplochromis_burtoni
MGP_PahariEiJ_G0022961	Sall1	100	90.717	ENSHGLG00000004288	-	100	90.717	Heterocephalus_glaber_female
MGP_PahariEiJ_G0022961	Sall1	100	90.717	ENSHGLG00100017496	SALL1	100	90.717	Heterocephalus_glaber_male
MGP_PahariEiJ_G0022961	Sall1	100	65.311	ENSHCOG00000000974	sall1a	99	65.502	Hippocampus_comes
MGP_PahariEiJ_G0022961	Sall1	99	67.461	ENSIPUG00000016265	SALL1	99	67.015	Ictalurus_punctatus
MGP_PahariEiJ_G0022961	Sall1	99	49.553	ENSIPUG00000022928	sall1b	99	48.856	Ictalurus_punctatus
MGP_PahariEiJ_G0022961	Sall1	100	90.505	ENSSTOG00000020885	SALL1	100	89.827	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022961	Sall1	100	66.049	ENSKMAG00000016681	sall1a	99	65.727	Kryptolebias_marmoratus
MGP_PahariEiJ_G0022961	Sall1	97	65.417	ENSLBEG00000012207	sall1a	95	65.517	Labrus_bergylta
MGP_PahariEiJ_G0022961	Sall1	97	38.595	ENSLACG00000014018	-	93	39.647	Latimeria_chalumnae
MGP_PahariEiJ_G0022961	Sall1	100	76.000	ENSLACG00000003556	SALL1	99	76.435	Latimeria_chalumnae
MGP_PahariEiJ_G0022961	Sall1	99	71.216	ENSLOCG00000007283	sall1b	99	70.843	Lepisosteus_oculatus
MGP_PahariEiJ_G0022961	Sall1	98	88.308	ENSLAFG00000015251	SALL1	100	87.692	Loxodonta_africana
MGP_PahariEiJ_G0022961	Sall1	100	90.422	ENSMFAG00000003298	SALL1	100	90.422	Macaca_fascicularis
MGP_PahariEiJ_G0022961	Sall1	93	90.643	ENSMMUG00000017200	SALL1	100	90.643	Macaca_mulatta
MGP_PahariEiJ_G0022961	Sall1	93	90.561	ENSMNEG00000034770	SALL1	100	90.561	Macaca_nemestrina
MGP_PahariEiJ_G0022961	Sall1	100	90.121	ENSMLEG00000036406	SALL1	100	90.561	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022961	Sall1	100	66.814	ENSMAMG00000004164	sall1a	100	66.765	Mastacembelus_armatus
MGP_PahariEiJ_G0022961	Sall1	100	66.716	ENSMZEG00005006479	sall1a	99	66.270	Maylandia_zebra
MGP_PahariEiJ_G0022961	Sall1	98	82.294	ENSMGAG00000004704	SALL1	99	82.602	Meleagris_gallopavo
MGP_PahariEiJ_G0022961	Sall1	100	91.843	ENSMAUG00000019093	Sall1	100	91.616	Mesocricetus_auratus
MGP_PahariEiJ_G0022961	Sall1	100	88.830	ENSMICG00000036486	SALL1	100	88.830	Microcebus_murinus
MGP_PahariEiJ_G0022961	Sall1	100	65.848	ENSMMOG00000016400	sall1a	100	65.902	Mola_mola
MGP_PahariEiJ_G0022961	Sall1	100	85.585	ENSMODG00000013114	SALL1	100	85.434	Monodelphis_domestica
MGP_PahariEiJ_G0022961	Sall1	100	66.593	ENSMALG00000013400	sall1a	100	66.642	Monopterus_albus
MGP_PahariEiJ_G0022961	Sall1	100	97.358	MGP_CAROLIEiJ_G0031362	Sall1	100	97.358	Mus_caroli
MGP_PahariEiJ_G0022961	Sall1	100	97.659	ENSMUSG00000031665	Sall1	100	97.659	Mus_musculus
MGP_PahariEiJ_G0022961	Sall1	100	97.583	MGP_SPRETEiJ_G0032480	Sall1	100	97.583	Mus_spretus
MGP_PahariEiJ_G0022961	Sall1	98	87.107	ENSMPUG00000003265	SALL1	97	86.550	Mustela_putorius_furo
MGP_PahariEiJ_G0022961	Sall1	98	82.748	ENSMLUG00000015541	SALL1	100	82.824	Myotis_lucifugus
MGP_PahariEiJ_G0022961	Sall1	100	66.667	ENSNBRG00000009307	sall1a	99	66.219	Neolamprologus_brichardi
MGP_PahariEiJ_G0022961	Sall1	94	97.222	ENSNLEG00000001008	SALL1	100	97.222	Nomascus_leucogenys
MGP_PahariEiJ_G0022961	Sall1	100	85.736	ENSMEUG00000012206	SALL1	100	84.981	Notamacropus_eugenii
MGP_PahariEiJ_G0022961	Sall1	76	93.567	ENSOPRG00000005645	SALL1	74	93.567	Ochotona_princeps
MGP_PahariEiJ_G0022961	Sall1	100	90.717	ENSODEG00000003685	SALL1	100	90.717	Octodon_degus
MGP_PahariEiJ_G0022961	Sall1	100	66.964	ENSONIG00000002831	sall1a	99	66.518	Oreochromis_niloticus
MGP_PahariEiJ_G0022961	Sall1	89	87.547	ENSOANG00000013399	SALL1	99	85.776	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022961	Sall1	100	66.148	ENSORLG00000013827	sall1a	98	68.033	Oryzias_latipes
MGP_PahariEiJ_G0022961	Sall1	100	66.074	ENSORLG00020020570	sall1a	99	66.247	Oryzias_latipes_hni
MGP_PahariEiJ_G0022961	Sall1	100	66.296	ENSORLG00015018830	sall1a	98	68.117	Oryzias_latipes_hsok
MGP_PahariEiJ_G0022961	Sall1	100	66.296	ENSOMEG00000016043	sall1a	99	66.469	Oryzias_melastigma
MGP_PahariEiJ_G0022961	Sall1	100	89.057	ENSOGAG00000027316	SALL1	100	89.132	Otolemur_garnettii
MGP_PahariEiJ_G0022961	Sall1	100	82.459	ENSOARG00000017583	SALL1	100	82.622	Ovis_aries
MGP_PahariEiJ_G0022961	Sall1	99	89.185	ENSPPAG00000035657	SALL1	100	89.237	Pan_paniscus
MGP_PahariEiJ_G0022961	Sall1	98	67.769	ENSPPAG00000035136	-	99	68.203	Pan_paniscus
MGP_PahariEiJ_G0022961	Sall1	100	88.018	ENSPPRG00000023283	SALL1	100	88.537	Panthera_pardus
MGP_PahariEiJ_G0022961	Sall1	84	94.667	ENSPTIG00000013539	-	96	94.667	Panthera_tigris_altaica
MGP_PahariEiJ_G0022961	Sall1	100	89.744	ENSPTRG00000008108	SALL1	100	89.422	Pan_troglodytes
MGP_PahariEiJ_G0022961	Sall1	96	68.214	ENSPTRG00000045256	-	98	68.706	Pan_troglodytes
MGP_PahariEiJ_G0022961	Sall1	100	90.196	ENSPANG00000024176	SALL1	100	90.422	Papio_anubis
MGP_PahariEiJ_G0022961	Sall1	100	65.087	ENSPKIG00000005383	-	99	64.981	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022961	Sall1	100	65.022	ENSPKIG00000022251	sall1a	99	64.996	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022961	Sall1	100	82.326	ENSPSIG00000008582	SALL1	99	82.691	Pelodiscus_sinensis
MGP_PahariEiJ_G0022961	Sall1	100	64.528	ENSPMGG00000021788	sall1a	100	64.702	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0022961	Sall1	100	85.887	ENSPCIG00000017840	SALL1	100	85.132	Phascolarctos_cinereus
MGP_PahariEiJ_G0022961	Sall1	98	66.717	ENSPFOG00000015799	sall1a	96	66.919	Poecilia_formosa
MGP_PahariEiJ_G0022961	Sall1	100	66.691	ENSPLAG00000022539	sall1a	99	66.889	Poecilia_latipinna
MGP_PahariEiJ_G0022961	Sall1	100	66.989	ENSPMEG00000020894	sall1a	99	67.112	Poecilia_mexicana
MGP_PahariEiJ_G0022961	Sall1	100	66.444	ENSPREG00000006802	sall1a	99	66.568	Poecilia_reticulata
MGP_PahariEiJ_G0022961	Sall1	90	89.162	ENSPPYG00000007345	SALL1	96	89.331	Pongo_abelii
MGP_PahariEiJ_G0022961	Sall1	84	93.827	ENSPCAG00000008162	SALL1	93	93.827	Procavia_capensis
MGP_PahariEiJ_G0022961	Sall1	100	88.914	ENSPCOG00000028192	SALL1	100	89.140	Propithecus_coquereli
MGP_PahariEiJ_G0022961	Sall1	67	89.252	ENSPVAG00000015374	SALL1	100	90.304	Pteropus_vampyrus
MGP_PahariEiJ_G0022961	Sall1	100	66.790	ENSPNYG00000010865	sall1a	99	66.344	Pundamilia_nyererei
MGP_PahariEiJ_G0022961	Sall1	98	63.462	ENSPNAG00000028248	-	99	65.306	Pygocentrus_nattereri
MGP_PahariEiJ_G0022961	Sall1	100	65.499	ENSPNAG00000023644	sall1a	99	65.022	Pygocentrus_nattereri
MGP_PahariEiJ_G0022961	Sall1	99	52.806	ENSPNAG00000007442	sall1b	99	52.998	Pygocentrus_nattereri
MGP_PahariEiJ_G0022961	Sall1	100	94.189	ENSRNOG00000013907	Sall1	100	94.264	Rattus_norvegicus
MGP_PahariEiJ_G0022961	Sall1	93	90.724	ENSRBIG00000015707	SALL1	100	90.806	Rhinopithecus_bieti
MGP_PahariEiJ_G0022961	Sall1	99	89.642	ENSRROG00000035777	SALL1	100	90.724	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022961	Sall1	100	90.649	ENSSBOG00000032186	SALL1	100	90.649	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022961	Sall1	100	84.970	ENSSHAG00000009477	SALL1	100	84.830	Sarcophilus_harrisii
MGP_PahariEiJ_G0022961	Sall1	98	65.578	ENSSFOG00015001590	sall1a	99	66.131	Scleropages_formosus
MGP_PahariEiJ_G0022961	Sall1	99	65.430	ENSSFOG00015020020	sall1a	99	65.356	Scleropages_formosus
MGP_PahariEiJ_G0022961	Sall1	100	66.741	ENSSMAG00000009160	sall1a	100	66.345	Scophthalmus_maximus
MGP_PahariEiJ_G0022961	Sall1	100	66.913	ENSSDUG00000006507	sall1a	100	66.642	Seriola_dumerili
MGP_PahariEiJ_G0022961	Sall1	90	59.184	ENSSDUG00000000748	sall1b	84	59.184	Seriola_dumerili
MGP_PahariEiJ_G0022961	Sall1	100	66.987	ENSSLDG00000017721	sall1a	100	66.716	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022961	Sall1	98	88.181	ENSSARG00000000661	SALL1	100	88.420	Sorex_araneus
MGP_PahariEiJ_G0022961	Sall1	100	82.189	ENSSPUG00000000156	SALL1	99	82.553	Sphenodon_punctatus
MGP_PahariEiJ_G0022961	Sall1	100	67.013	ENSSPAG00000021615	sall1a	99	66.865	Stegastes_partitus
MGP_PahariEiJ_G0022961	Sall1	100	88.018	ENSSSCG00000002836	SALL1	100	88.018	Sus_scrofa
MGP_PahariEiJ_G0022961	Sall1	100	81.962	ENSTGUG00000007514	SALL1	99	82.326	Taeniopygia_guttata
MGP_PahariEiJ_G0022961	Sall1	91	64.663	ENSTRUG00000008950	sall1a	100	64.668	Takifugu_rubripes
MGP_PahariEiJ_G0022961	Sall1	92	64.036	ENSTNIG00000004257	sall1a	100	63.902	Tetraodon_nigroviridis
MGP_PahariEiJ_G0022961	Sall1	73	100.000	ENSTBEG00000002119	-	55	100.000	Tupaia_belangeri
MGP_PahariEiJ_G0022961	Sall1	90	88.390	ENSUAMG00000023379	-	92	88.390	Ursus_americanus
MGP_PahariEiJ_G0022961	Sall1	90	88.081	ENSVVUG00000019383	-	99	88.250	Vulpes_vulpes
MGP_PahariEiJ_G0022961	Sall1	75	61.538	ENSXETG00000017176	sall2	60	61.538	Xenopus_tropicalis
MGP_PahariEiJ_G0022961	Sall1	100	73.766	ENSXETG00000018417	sall1	99	73.820	Xenopus_tropicalis
MGP_PahariEiJ_G0022961	Sall1	100	66.691	ENSXMAG00000016273	sall1a	99	66.815	Xiphophorus_maculatus