EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0022964 (Gene tree)
Gene ID: 110337794
Gene Symbol: Chd9
Alias: 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 118742 bases
Position: chr20:15213175-15331916
Accession: 1924001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0053740	ResIII	PF04851.15	4.6e-06	1	1
MGP_PahariEiJ_P0053740	BRK	PF07533.16	3.1e-30	1	2
MGP_PahariEiJ_P0053740	BRK	PF07533.16	3.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0053740	-	8544	-	MGP_PahariEiJ_P0053740	2847 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0022964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0022964's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0022964	Chd9	76	60.945	MGP_PahariEiJ_G0026048	Chd6	93	65.799
MGP_PahariEiJ_G0022964	Chd9	73	57.804	MGP_PahariEiJ_G0030258	Chd8	67	68.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0022964	Chd9	99	88.280	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0022964	Chd9	84	69.303	ENSAPOG00000023034	chd9	95	68.201	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0022964	Chd9	99	88.569	ENSAMEG00000016232	CHD9	99	88.916	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0022964	Chd9	84	69.179	ENSAOCG00000005487	chd9	98	67.342	Amphiprion_ocellaris
MGP_PahariEiJ_G0022964	Chd9	84	69.098	ENSAPEG00000009859	chd9	97	67.152	Amphiprion_percula
MGP_PahariEiJ_G0022964	Chd9	84	70.651	ENSATEG00000002748	chd9	96	63.789	Anabas_testudineus
MGP_PahariEiJ_G0022964	Chd9	99	79.556	ENSAPLG00000002826	CHD9	97	82.974	Anas_platyrhynchos
MGP_PahariEiJ_G0022964	Chd9	99	77.137	ENSACAG00000016150	CHD9	98	77.658	Anolis_carolinensis
MGP_PahariEiJ_G0022964	Chd9	99	88.731	ENSANAG00000015630	CHD9	98	94.505	Aotus_nancymaae
MGP_PahariEiJ_G0022964	Chd9	79	69.244	ENSACLG00000016899	chd9	73	62.546	Astatotilapia_calliptera
MGP_PahariEiJ_G0022964	Chd9	81	67.238	ENSAMXG00000005652	chd9	95	74.209	Astyanax_mexicanus
MGP_PahariEiJ_G0022964	Chd9	99	88.567	ENSBTAG00000002287	CHD9	99	88.602	Bos_taurus
MGP_PahariEiJ_G0022964	Chd9	99	88.606	ENSCJAG00000001573	CHD9	98	94.872	Callithrix_jacchus
MGP_PahariEiJ_G0022964	Chd9	99	88.804	ENSCAFG00000009699	CHD9	99	89.012	Canis_familiaris
MGP_PahariEiJ_G0022964	Chd9	99	88.804	ENSCAFG00020002879	CHD9	98	95.238	Canis_lupus_dingo
MGP_PahariEiJ_G0022964	Chd9	99	88.284	ENSTSYG00000007693	CHD9	98	94.872	Carlito_syrichta
MGP_PahariEiJ_G0022964	Chd9	80	73.428	ENSCAPG00000011604	CHD9	81	74.183	Cavia_aperea
MGP_PahariEiJ_G0022964	Chd9	99	85.426	ENSCPOG00000036544	CHD9	99	85.809	Cavia_porcellus
MGP_PahariEiJ_G0022964	Chd9	99	88.459	ENSCCAG00000036178	CHD9	98	94.139	Cebus_capucinus
MGP_PahariEiJ_G0022964	Chd9	99	88.328	ENSCATG00000036753	CHD9	98	94.872	Cercocebus_atys
MGP_PahariEiJ_G0022964	Chd9	99	88.531	ENSCLAG00000007137	CHD9	99	94.451	Chinchilla_lanigera
MGP_PahariEiJ_G0022964	Chd9	99	88.292	ENSCSAG00000005311	CHD9	99	88.777	Chlorocebus_sabaeus
MGP_PahariEiJ_G0022964	Chd9	73	96.154	ENSCHOG00000003935	CHD9	74	96.154	Choloepus_hoffmanni
MGP_PahariEiJ_G0022964	Chd9	91	90.751	ENSCPBG00000012459	CHD9	99	90.751	Chrysemys_picta_bellii
MGP_PahariEiJ_G0022964	Chd9	99	88.392	ENSCANG00000030349	CHD9	98	94.872	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0022964	Chd9	100	91.877	ENSCGRG00001016150	Chd9	100	91.220	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0022964	Chd9	100	91.877	ENSCGRG00000012850	Chd9	99	96.763	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0022964	Chd9	79	66.694	ENSCSEG00000009209	chd9	94	66.625	Cynoglossus_semilaevis
MGP_PahariEiJ_G0022964	Chd9	84	68.678	ENSCVAG00000016195	chd9	93	66.130	Cyprinodon_variegatus
MGP_PahariEiJ_G0022964	Chd9	81	67.427	ENSDARG00000074498	chd9	99	66.100	Danio_rerio
MGP_PahariEiJ_G0022964	Chd9	80	88.694	ENSDNOG00000006045	CHD9	99	88.994	Dasypus_novemcinctus
MGP_PahariEiJ_G0022964	Chd9	68	89.288	ENSDORG00000008523	-	99	89.237	Dipodomys_ordii
MGP_PahariEiJ_G0022964	Chd9	93	95.789	ENSETEG00000009565	CHD9	93	95.789	Echinops_telfairi
MGP_PahariEiJ_G0022964	Chd9	99	88.431	ENSEASG00005014832	CHD9	99	94.079	Equus_asinus_asinus
MGP_PahariEiJ_G0022964	Chd9	99	88.504	ENSECAG00000011505	CHD9	99	88.773	Equus_caballus
MGP_PahariEiJ_G0022964	Chd9	81	95.580	ENSEEUG00000014515	CHD9	87	95.580	Erinaceus_europaeus
MGP_PahariEiJ_G0022964	Chd9	78	72.139	ENSELUG00000006031	chd9	95	66.844	Esox_lucius
MGP_PahariEiJ_G0022964	Chd9	99	88.284	ENSFCAG00000022534	CHD9	98	94.872	Felis_catus
MGP_PahariEiJ_G0022964	Chd9	82	83.077	ENSFALG00000013276	CHD9	99	83.617	Ficedula_albicollis
MGP_PahariEiJ_G0022964	Chd9	99	88.462	ENSFDAG00000021037	CHD9	99	88.939	Fukomys_damarensis
MGP_PahariEiJ_G0022964	Chd9	84	68.895	ENSFHEG00000006068	chd9	91	75.031	Fundulus_heteroclitus
MGP_PahariEiJ_G0022964	Chd9	67	76.255	ENSGMOG00000006040	chd9	83	76.255	Gadus_morhua
MGP_PahariEiJ_G0022964	Chd9	95	80.432	ENSGALG00000039178	CHD9	99	80.511	Gallus_gallus
MGP_PahariEiJ_G0022964	Chd9	84	69.119	ENSGAFG00000010014	chd9	98	66.748	Gambusia_affinis
MGP_PahariEiJ_G0022964	Chd9	81	65.526	ENSGACG00000016694	chd9	93	73.993	Gasterosteus_aculeatus
MGP_PahariEiJ_G0022964	Chd9	99	88.392	ENSGGOG00000014816	CHD9	98	95.238	Gorilla_gorilla
MGP_PahariEiJ_G0022964	Chd9	79	69.313	ENSHBUG00000023322	chd9	90	69.231	Haplochromis_burtoni
MGP_PahariEiJ_G0022964	Chd9	99	88.761	ENSHGLG00000014938	CHD9	99	94.566	Heterocephalus_glaber_female
MGP_PahariEiJ_G0022964	Chd9	90	65.399	ENSHCOG00000000937	chd9	97	67.083	Hippocampus_comes
MGP_PahariEiJ_G0022964	Chd9	79	69.484	ENSIPUG00000016448	chd9	92	72.628	Ictalurus_punctatus
MGP_PahariEiJ_G0022964	Chd9	99	88.490	ENSSTOG00000022273	CHD9	99	94.798	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0022964	Chd9	68	88.990	ENSJJAG00000015741	-	99	89.343	Jaculus_jaculus
MGP_PahariEiJ_G0022964	Chd9	84	68.600	ENSKMAG00000016784	chd9	94	67.807	Kryptolebias_marmoratus
MGP_PahariEiJ_G0022964	Chd9	92	61.400	ENSLBEG00000012077	chd9	95	67.467	Labrus_bergylta
MGP_PahariEiJ_G0022964	Chd9	99	68.989	ENSLACG00000005557	CHD9	99	68.968	Latimeria_chalumnae
MGP_PahariEiJ_G0022964	Chd9	87	70.357	ENSLOCG00000007225	chd9	84	78.755	Lepisosteus_oculatus
MGP_PahariEiJ_G0022964	Chd9	99	87.907	ENSLAFG00000015374	CHD9	99	88.115	Loxodonta_africana
MGP_PahariEiJ_G0022964	Chd9	99	88.323	ENSMFAG00000041354	CHD9	98	94.872	Macaca_fascicularis
MGP_PahariEiJ_G0022964	Chd9	99	88.323	ENSMMUG00000016310	CHD9	98	94.872	Macaca_mulatta
MGP_PahariEiJ_G0022964	Chd9	99	88.258	ENSMNEG00000031494	CHD9	100	88.991	Macaca_nemestrina
MGP_PahariEiJ_G0022964	Chd9	99	88.358	ENSMLEG00000043219	CHD9	98	94.872	Mandrillus_leucophaeus
MGP_PahariEiJ_G0022964	Chd9	92	69.384	ENSMAMG00000003909	chd9	96	61.325	Mastacembelus_armatus
MGP_PahariEiJ_G0022964	Chd9	84	69.031	ENSMZEG00005006581	chd9	94	62.522	Maylandia_zebra
MGP_PahariEiJ_G0022964	Chd9	95	75.298	ENSMGAG00000004642	CHD9	96	77.938	Meleagris_gallopavo
MGP_PahariEiJ_G0022964	Chd9	99	89.090	ENSMICG00000016679	CHD9	98	95.238	Microcebus_murinus
MGP_PahariEiJ_G0022964	Chd9	84	68.801	ENSMMOG00000016406	chd9	94	62.874	Mola_mola
MGP_PahariEiJ_G0022964	Chd9	73	80.585	ENSMODG00000013142	-	99	91.074	Monodelphis_domestica
MGP_PahariEiJ_G0022964	Chd9	84	68.955	ENSMALG00000013306	chd9	93	62.392	Monopterus_albus
MGP_PahariEiJ_G0022964	Chd9	100	96.417	MGP_CAROLIEiJ_G0031364	Chd9	100	96.417	Mus_caroli
MGP_PahariEiJ_G0022964	Chd9	100	95.722	ENSMUSG00000056608	Chd9	99	98.960	Mus_musculus
MGP_PahariEiJ_G0022964	Chd9	100	95.859	MGP_SPRETEiJ_G0032483	Chd9	100	95.859	Mus_spretus
MGP_PahariEiJ_G0022964	Chd9	99	88.284	ENSMPUG00000003285	CHD9	99	88.700	Mustela_putorius_furo
MGP_PahariEiJ_G0022964	Chd9	99	87.899	ENSMLUG00000004456	CHD9	99	88.350	Myotis_lucifugus
MGP_PahariEiJ_G0022964	Chd9	84	69.309	ENSNBRG00000009423	chd9	67	74.539	Neolamprologus_brichardi
MGP_PahariEiJ_G0022964	Chd9	90	88.774	ENSNLEG00000001026	CHD9	100	89.004	Nomascus_leucogenys
MGP_PahariEiJ_G0022964	Chd9	75	94.118	ENSMEUG00000008222	-	82	94.118	Notamacropus_eugenii
MGP_PahariEiJ_G0022964	Chd9	83	100.000	ENSOPRG00000011168	CHD9	85	96.571	Ochotona_princeps
MGP_PahariEiJ_G0022964	Chd9	99	88.523	ENSODEG00000004466	CHD9	99	88.592	Octodon_degus
MGP_PahariEiJ_G0022964	Chd9	79	69.911	ENSONIG00000002816	chd9	87	62.578	Oreochromis_niloticus
MGP_PahariEiJ_G0022964	Chd9	99	82.381	ENSOANG00000013401	CHD9	99	82.589	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0022964	Chd9	82	90.450	ENSOCUG00000001016	CHD9	98	90.909	Oryctolagus_cuniculus
MGP_PahariEiJ_G0022964	Chd9	84	68.414	ENSORLG00000013810	chd9	97	59.310	Oryzias_latipes
MGP_PahariEiJ_G0022964	Chd9	93	69.214	ENSORLG00020020665	chd9	96	61.001	Oryzias_latipes_hni
MGP_PahariEiJ_G0022964	Chd9	85	69.267	ENSORLG00015019126	chd9	95	66.694	Oryzias_latipes_hsok
MGP_PahariEiJ_G0022964	Chd9	99	88.427	ENSOGAG00000002110	CHD9	99	88.392	Otolemur_garnettii
MGP_PahariEiJ_G0022964	Chd9	99	87.850	ENSOARG00000017664	CHD9	99	88.197	Ovis_aries
MGP_PahariEiJ_G0022964	Chd9	82	88.717	ENSPPAG00000039388	-	99	88.968	Pan_paniscus
MGP_PahariEiJ_G0022964	Chd9	99	88.146	ENSPPRG00000004801	CHD9	98	94.505	Panthera_pardus
MGP_PahariEiJ_G0022964	Chd9	99	87.175	ENSPTIG00000021854	CHD9	99	87.314	Panthera_tigris_altaica
MGP_PahariEiJ_G0022964	Chd9	99	88.492	ENSPTRG00000008113	CHD9	98	95.238	Pan_troglodytes
MGP_PahariEiJ_G0022964	Chd9	99	88.392	ENSPANG00000019307	CHD9	98	94.872	Papio_anubis
MGP_PahariEiJ_G0022964	Chd9	95	61.530	ENSPKIG00000021876	chd9	96	63.959	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022964	Chd9	99	57.381	ENSPKIG00000025401	-	94	62.671	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0022964	Chd9	65	81.578	ENSPSIG00000008099	CHD9	99	81.578	Pelodiscus_sinensis
MGP_PahariEiJ_G0022964	Chd9	59	57.283	ENSPMAG00000006035	-	92	67.309	Petromyzon_marinus
MGP_PahariEiJ_G0022964	Chd9	88	83.132	ENSPCIG00000017215	CHD9	97	88.560	Phascolarctos_cinereus
MGP_PahariEiJ_G0022964	Chd9	79	69.274	ENSPFOG00000015839	chd9	85	65.280	Poecilia_formosa
MGP_PahariEiJ_G0022964	Chd9	84	69.231	ENSPLAG00000011118	chd9	98	66.882	Poecilia_latipinna
MGP_PahariEiJ_G0022964	Chd9	84	69.217	ENSPMEG00000015106	chd9	99	59.283	Poecilia_mexicana
MGP_PahariEiJ_G0022964	Chd9	84	68.890	ENSPREG00000006473	chd9	98	67.086	Poecilia_reticulata
MGP_PahariEiJ_G0022964	Chd9	99	88.354	ENSPPYG00000007348	CHD9	99	88.596	Pongo_abelii
MGP_PahariEiJ_G0022964	Chd9	78	93.382	ENSPCAG00000007564	CHD9	86	93.382	Procavia_capensis
MGP_PahariEiJ_G0022964	Chd9	99	87.314	ENSPCOG00000028433	CHD9	98	95.604	Propithecus_coquereli
MGP_PahariEiJ_G0022964	Chd9	97	85.424	ENSPVAG00000015617	CHD9	97	85.658	Pteropus_vampyrus
MGP_PahariEiJ_G0022964	Chd9	84	68.989	ENSPNYG00000010947	chd9	95	68.321	Pundamilia_nyererei
MGP_PahariEiJ_G0022964	Chd9	87	64.611	ENSPNAG00000024141	chd9	99	67.358	Pygocentrus_nattereri
MGP_PahariEiJ_G0022964	Chd9	90	91.577	ENSRNOG00000049302	Chd9	100	94.908	Rattus_norvegicus
MGP_PahariEiJ_G0022964	Chd9	82	89.829	ENSRBIG00000035553	CHD9	98	94.872	Rhinopithecus_bieti
MGP_PahariEiJ_G0022964	Chd9	82	89.777	ENSRROG00000033278	CHD9	98	94.872	Rhinopithecus_roxellana
MGP_PahariEiJ_G0022964	Chd9	99	88.796	ENSSBOG00000030240	CHD9	98	94.505	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0022964	Chd9	99	82.129	ENSSHAG00000002719	CHD9	99	82.567	Sarcophilus_harrisii
MGP_PahariEiJ_G0022964	Chd9	98	60.932	ENSSFOG00015020209	chd9	96	64.098	Scleropages_formosus
MGP_PahariEiJ_G0022964	Chd9	84	67.842	ENSSMAG00000008953	chd9	95	67.481	Scophthalmus_maximus
MGP_PahariEiJ_G0022964	Chd9	79	69.168	ENSSDUG00000006139	chd9	67	73.934	Seriola_dumerili
MGP_PahariEiJ_G0022964	Chd9	88	69.922	ENSSLDG00000017818	chd9	98	66.827	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0022964	Chd9	53	82.841	ENSSARG00000010632	CHD9	53	82.841	Sorex_araneus
MGP_PahariEiJ_G0022964	Chd9	84	68.797	ENSSPAG00000021649	chd9	98	66.480	Stegastes_partitus
MGP_PahariEiJ_G0022964	Chd9	99	86.889	ENSSSCG00000033591	CHD9	98	91.296	Sus_scrofa
MGP_PahariEiJ_G0022964	Chd9	90	80.352	ENSTGUG00000007476	CHD9	100	80.810	Taeniopygia_guttata
MGP_PahariEiJ_G0022964	Chd9	65	62.150	ENSTNIG00000003825	chd9	96	62.150	Tetraodon_nigroviridis
MGP_PahariEiJ_G0022964	Chd9	65	91.892	ENSTBEG00000016052	-	78	91.892	Tupaia_belangeri
MGP_PahariEiJ_G0022964	Chd9	90	87.816	ENSTTRG00000012674	CHD9	90	88.084	Tursiops_truncatus
MGP_PahariEiJ_G0022964	Chd9	63	87.943	ENSUAMG00000022706	CHD9	98	95.238	Ursus_americanus
MGP_PahariEiJ_G0022964	Chd9	90	87.280	ENSUMAG00000004043	CHD9	98	97.122	Ursus_maritimus
MGP_PahariEiJ_G0022964	Chd9	97	87.982	ENSVPAG00000001374	CHD9	97	88.411	Vicugna_pacos
MGP_PahariEiJ_G0022964	Chd9	99	88.804	ENSVVUG00000019435	CHD9	99	89.012	Vulpes_vulpes
MGP_PahariEiJ_G0022964	Chd9	99	69.790	ENSXETG00000000349	chd9	96	74.355	Xenopus_tropicalis
MGP_PahariEiJ_G0022964	Chd9	79	69.504	ENSXCOG00000012997	chd9	95	68.629	Xiphophorus_couchianus
MGP_PahariEiJ_G0022964	Chd9	84	68.763	ENSXMAG00000016192	chd9	95	68.779	Xiphophorus_maculatus