EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023028 (Gene tree)
Gene ID: 110337318
Gene Symbol: Cnot1
Alias: 6030411K04Rik
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 85013 bases
Position: chr20:19890418-19975430
Accession: 110337318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0053935	Not1	PF04054.15	1.7e-152	1	1
MGP_PahariEiJ_P0053936	Not1	PF04054.15	2.4e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0053935	-	8359	XM_021220174	MGP_PahariEiJ_P0053935	2376 (aa)	XP_021075833	UPI000A305D96
MGP_PahariEiJ_T0053936	-	8209	-	MGP_PahariEiJ_P0053936	2326 (aa)	XP_021075837	UPI000A3086E5

Gene Model

Click here to download MGP_PahariEiJ_G0023028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023028	Cnot1	100	99.369	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0023028	Cnot1	97	96.774	ENSAPOG00000005042	cnot1	100	96.774	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0023028	Cnot1	100	99.200	ENSAMEG00000017298	CNOT1	100	99.200	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023028	Cnot1	90	89.702	ENSACIG00000016003	cnot1	100	90.028	Amphilophus_citrinellus
MGP_PahariEiJ_G0023028	Cnot1	100	90.428	ENSAPEG00000022342	cnot1	100	90.554	Amphiprion_percula
MGP_PahariEiJ_G0023028	Cnot1	97	96.914	ENSATEG00000012892	cnot1	100	96.914	Anabas_testudineus
MGP_PahariEiJ_G0023028	Cnot1	100	97.395	ENSAPLG00000007162	CNOT1	100	97.395	Anas_platyrhynchos
MGP_PahariEiJ_G0023028	Cnot1	92	95.826	ENSACAG00000001602	CNOT1	98	96.058	Anolis_carolinensis
MGP_PahariEiJ_G0023028	Cnot1	100	97.979	ENSANAG00000038198	CNOT1	100	97.979	Aotus_nancymaae
MGP_PahariEiJ_G0023028	Cnot1	97	96.914	ENSACLG00000014234	cnot1	100	96.914	Astatotilapia_calliptera
MGP_PahariEiJ_G0023028	Cnot1	100	90.787	ENSAMXG00000013170	cnot1	100	91.295	Astyanax_mexicanus
MGP_PahariEiJ_G0023028	Cnot1	100	99.579	ENSBTAG00000020782	CNOT1	100	99.579	Bos_taurus
MGP_PahariEiJ_G0023028	Cnot1	81	40.442	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
MGP_PahariEiJ_G0023028	Cnot1	100	99.327	ENSCJAG00000011318	CNOT1	100	99.327	Callithrix_jacchus
MGP_PahariEiJ_G0023028	Cnot1	100	99.118	ENSCAFG00000008426	CNOT1	100	99.118	Canis_familiaris
MGP_PahariEiJ_G0023028	Cnot1	100	99.398	ENSCAFG00020010156	CNOT1	100	99.398	Canis_lupus_dingo
MGP_PahariEiJ_G0023028	Cnot1	100	99.579	ENSCHIG00000010452	CNOT1	100	99.579	Capra_hircus
MGP_PahariEiJ_G0023028	Cnot1	100	99.495	ENSTSYG00000006888	CNOT1	100	99.495	Carlito_syrichta
MGP_PahariEiJ_G0023028	Cnot1	100	94.949	ENSCPOG00000013026	CNOT1	100	94.949	Cavia_porcellus
MGP_PahariEiJ_G0023028	Cnot1	100	97.769	ENSCCAG00000026333	CNOT1	100	97.769	Cebus_capucinus
MGP_PahariEiJ_G0023028	Cnot1	100	99.411	ENSCATG00000032625	CNOT1	100	99.411	Cercocebus_atys
MGP_PahariEiJ_G0023028	Cnot1	100	99.621	ENSCLAG00000006289	CNOT1	100	99.621	Chinchilla_lanigera
MGP_PahariEiJ_G0023028	Cnot1	100	99.411	ENSCSAG00000004731	CNOT1	100	99.411	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023028	Cnot1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
MGP_PahariEiJ_G0023028	Cnot1	98	95.530	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023028	Cnot1	100	58.995	ENSCING00000009149	-	100	58.631	Ciona_intestinalis
MGP_PahariEiJ_G0023028	Cnot1	89	62.973	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
MGP_PahariEiJ_G0023028	Cnot1	100	97.560	ENSCANG00000040534	CNOT1	100	97.560	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023028	Cnot1	100	99.790	ENSCGRG00001016365	Cnot1	100	99.790	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023028	Cnot1	100	99.790	ENSCGRG00000001714	Cnot1	100	99.790	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023028	Cnot1	100	82.895	ENSCVAG00000018930	cnot1	100	82.770	Cyprinodon_variegatus
MGP_PahariEiJ_G0023028	Cnot1	100	89.899	ENSDARG00000004174	cnot1	100	89.858	Danio_rerio
MGP_PahariEiJ_G0023028	Cnot1	100	96.887	ENSDNOG00000013250	CNOT1	100	96.887	Dasypus_novemcinctus
MGP_PahariEiJ_G0023028	Cnot1	99	46.190	FBgn0085436	Not1	99	48.104	Drosophila_melanogaster
MGP_PahariEiJ_G0023028	Cnot1	84	97.440	ENSETEG00000012806	CNOT1	84	97.440	Echinops_telfairi
MGP_PahariEiJ_G0023028	Cnot1	81	82.212	ENSEBUG00000011534	cnot1	95	82.212	Eptatretus_burgeri
MGP_PahariEiJ_G0023028	Cnot1	97	98.889	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
MGP_PahariEiJ_G0023028	Cnot1	100	99.579	ENSECAG00000009889	CNOT1	100	99.580	Equus_caballus
MGP_PahariEiJ_G0023028	Cnot1	90	98.903	ENSEEUG00000006015	CNOT1	90	98.903	Erinaceus_europaeus
MGP_PahariEiJ_G0023028	Cnot1	100	89.652	ENSELUG00000014085	cnot1	100	89.376	Esox_lucius
MGP_PahariEiJ_G0023028	Cnot1	100	99.203	ENSFCAG00000025155	CNOT1	100	99.203	Felis_catus
MGP_PahariEiJ_G0023028	Cnot1	100	97.433	ENSFALG00000007285	CNOT1	100	97.433	Ficedula_albicollis
MGP_PahariEiJ_G0023028	Cnot1	100	99.537	ENSFDAG00000013399	CNOT1	100	99.537	Fukomys_damarensis
MGP_PahariEiJ_G0023028	Cnot1	100	90.172	ENSFHEG00000020574	cnot1	100	90.172	Fundulus_heteroclitus
MGP_PahariEiJ_G0023028	Cnot1	92	89.564	ENSGMOG00000012864	cnot1	100	89.889	Gadus_morhua
MGP_PahariEiJ_G0023028	Cnot1	100	97.475	ENSGALG00000002301	CNOT1	100	97.475	Gallus_gallus
MGP_PahariEiJ_G0023028	Cnot1	100	89.043	ENSGAFG00000015005	cnot1	100	89.001	Gambusia_affinis
MGP_PahariEiJ_G0023028	Cnot1	92	90.218	ENSGACG00000002606	cnot1	100	95.631	Gasterosteus_aculeatus
MGP_PahariEiJ_G0023028	Cnot1	100	97.518	ENSGAGG00000022646	CNOT1	100	97.518	Gopherus_agassizii
MGP_PahariEiJ_G0023028	Cnot1	100	99.327	ENSGGOG00000009547	CNOT1	100	99.327	Gorilla_gorilla
MGP_PahariEiJ_G0023028	Cnot1	97	96.914	ENSHBUG00000001729	cnot1	100	96.914	Haplochromis_burtoni
MGP_PahariEiJ_G0023028	Cnot1	100	99.453	ENSHGLG00000014322	CNOT1	100	99.453	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023028	Cnot1	100	89.214	ENSHCOG00000006501	cnot1	100	89.353	Hippocampus_comes
MGP_PahariEiJ_G0023028	Cnot1	100	88.716	ENSIPUG00000011915	cnot1	100	89.178	Ictalurus_punctatus
MGP_PahariEiJ_G0023028	Cnot1	100	99.453	ENSSTOG00000005490	CNOT1	100	99.453	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023028	Cnot1	100	98.925	ENSJJAG00000000633	Cnot1	100	98.925	Jaculus_jaculus
MGP_PahariEiJ_G0023028	Cnot1	100	90.046	ENSKMAG00000006149	cnot1	100	89.925	Kryptolebias_marmoratus
MGP_PahariEiJ_G0023028	Cnot1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
MGP_PahariEiJ_G0023028	Cnot1	100	94.949	ENSLACG00000010869	CNOT1	100	94.949	Latimeria_chalumnae
MGP_PahariEiJ_G0023028	Cnot1	100	92.785	ENSLOCG00000006324	cnot1	100	92.827	Lepisosteus_oculatus
MGP_PahariEiJ_G0023028	Cnot1	100	99.243	ENSLAFG00000000098	CNOT1	100	99.243	Loxodonta_africana
MGP_PahariEiJ_G0023028	Cnot1	100	99.398	ENSMFAG00000035888	CNOT1	100	99.398	Macaca_fascicularis
MGP_PahariEiJ_G0023028	Cnot1	100	99.369	ENSMMUG00000014625	CNOT1	100	99.369	Macaca_mulatta
MGP_PahariEiJ_G0023028	Cnot1	100	96.819	ENSMNEG00000031820	CNOT1	100	99.440	Macaca_nemestrina
MGP_PahariEiJ_G0023028	Cnot1	100	98.194	ENSMLEG00000040933	CNOT1	100	98.194	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023028	Cnot1	100	89.341	ENSMAMG00000016524	cnot1	100	89.337	Mastacembelus_armatus
MGP_PahariEiJ_G0023028	Cnot1	97	96.914	ENSMZEG00005016210	cnot1	100	96.914	Maylandia_zebra
MGP_PahariEiJ_G0023028	Cnot1	100	97.222	ENSMGAG00000001908	CNOT1	100	97.222	Meleagris_gallopavo
MGP_PahariEiJ_G0023028	Cnot1	100	99.285	ENSMICG00000007071	CNOT1	100	99.285	Microcebus_murinus
MGP_PahariEiJ_G0023028	Cnot1	100	99.832	ENSMOCG00000017969	Cnot1	100	99.832	Microtus_ochrogaster
MGP_PahariEiJ_G0023028	Cnot1	97	93.548	ENSMMOG00000019134	cnot1	100	93.548	Mola_mola
MGP_PahariEiJ_G0023028	Cnot1	100	97.602	ENSMODG00000014199	CNOT1	100	97.602	Monodelphis_domestica
MGP_PahariEiJ_G0023028	Cnot1	100	90.046	ENSMALG00000008645	cnot1	100	90.088	Monopterus_albus
MGP_PahariEiJ_G0023028	Cnot1	95	100.000	MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	Mus_caroli
MGP_PahariEiJ_G0023028	Cnot1	100	99.958	ENSMUSG00000036550	Cnot1	100	99.958	Mus_musculus
MGP_PahariEiJ_G0023028	Cnot1	100	99.958	MGP_SPRETEiJ_G0032549	Cnot1	100	99.958	Mus_spretus
MGP_PahariEiJ_G0023028	Cnot1	100	99.495	ENSMPUG00000004830	CNOT1	100	99.495	Mustela_putorius_furo
MGP_PahariEiJ_G0023028	Cnot1	100	98.906	ENSMLUG00000003728	CNOT1	100	98.906	Myotis_lucifugus
MGP_PahariEiJ_G0023028	Cnot1	100	99.579	ENSNGAG00000018628	Cnot1	100	99.579	Nannospalax_galili
MGP_PahariEiJ_G0023028	Cnot1	94	96.914	ENSNBRG00000019358	cnot1	100	96.914	Neolamprologus_brichardi
MGP_PahariEiJ_G0023028	Cnot1	100	99.312	ENSNLEG00000003566	CNOT1	100	99.312	Nomascus_leucogenys
MGP_PahariEiJ_G0023028	Cnot1	86	97.763	ENSMEUG00000006145	CNOT1	87	97.763	Notamacropus_eugenii
MGP_PahariEiJ_G0023028	Cnot1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
MGP_PahariEiJ_G0023028	Cnot1	100	99.495	ENSODEG00000016337	CNOT1	100	99.495	Octodon_degus
MGP_PahariEiJ_G0023028	Cnot1	100	90.410	ENSONIG00000007358	cnot1	100	90.004	Oreochromis_niloticus
MGP_PahariEiJ_G0023028	Cnot1	92	97.996	ENSOANG00000012109	CNOT1	100	98.072	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0023028	Cnot1	100	99.411	ENSOCUG00000006911	CNOT1	100	99.411	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023028	Cnot1	100	90.440	ENSORLG00000013734	cnot1	100	90.394	Oryzias_latipes
MGP_PahariEiJ_G0023028	Cnot1	100	90.734	ENSORLG00020017012	cnot1	100	90.488	Oryzias_latipes_hni
MGP_PahariEiJ_G0023028	Cnot1	100	90.562	ENSORLG00015007091	cnot1	100	90.060	Oryzias_latipes_hsok
MGP_PahariEiJ_G0023028	Cnot1	100	89.884	ENSOMEG00000015124	cnot1	100	90.137	Oryzias_melastigma
MGP_PahariEiJ_G0023028	Cnot1	100	99.327	ENSOGAG00000000543	CNOT1	100	99.327	Otolemur_garnettii
MGP_PahariEiJ_G0023028	Cnot1	100	99.579	ENSOARG00000001567	CNOT1	100	99.579	Ovis_aries
MGP_PahariEiJ_G0023028	Cnot1	100	99.369	ENSPPAG00000022013	CNOT1	100	99.369	Pan_paniscus
MGP_PahariEiJ_G0023028	Cnot1	100	99.495	ENSPPRG00000004867	CNOT1	100	99.495	Panthera_pardus
MGP_PahariEiJ_G0023028	Cnot1	100	99.495	ENSPTIG00000012589	CNOT1	100	99.495	Panthera_tigris_altaica
MGP_PahariEiJ_G0023028	Cnot1	100	99.355	ENSPTRG00000008183	CNOT1	100	99.355	Pan_troglodytes
MGP_PahariEiJ_G0023028	Cnot1	100	95.935	ENSPANG00000020901	CNOT1	100	95.935	Papio_anubis
MGP_PahariEiJ_G0023028	Cnot1	100	92.069	ENSPKIG00000023538	CNOT1	100	92.237	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023028	Cnot1	97	93.118	ENSPKIG00000002914	CNOT1	99	93.118	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023028	Cnot1	100	97.391	ENSPSIG00000005499	CNOT1	100	97.391	Pelodiscus_sinensis
MGP_PahariEiJ_G0023028	Cnot1	100	81.292	ENSPMAG00000009381	cnot1	100	81.192	Petromyzon_marinus
MGP_PahariEiJ_G0023028	Cnot1	100	97.595	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
MGP_PahariEiJ_G0023028	Cnot1	99	89.685	ENSPFOG00000003497	cnot1	100	89.556	Poecilia_formosa
MGP_PahariEiJ_G0023028	Cnot1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
MGP_PahariEiJ_G0023028	Cnot1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
MGP_PahariEiJ_G0023028	Cnot1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
MGP_PahariEiJ_G0023028	Cnot1	100	99.327	ENSPPYG00000007410	CNOT1	100	99.327	Pongo_abelii
MGP_PahariEiJ_G0023028	Cnot1	90	97.104	ENSPCAG00000003241	CNOT1	90	97.104	Procavia_capensis
MGP_PahariEiJ_G0023028	Cnot1	100	99.312	ENSPCOG00000027139	CNOT1	100	99.312	Propithecus_coquereli
MGP_PahariEiJ_G0023028	Cnot1	100	96.928	ENSPVAG00000004243	CNOT1	100	96.928	Pteropus_vampyrus
MGP_PahariEiJ_G0023028	Cnot1	97	96.914	ENSPNYG00000012919	cnot1	100	96.914	Pundamilia_nyererei
MGP_PahariEiJ_G0023028	Cnot1	100	89.693	ENSPNAG00000000246	cnot1	100	90.114	Pygocentrus_nattereri
MGP_PahariEiJ_G0023028	Cnot1	100	99.958	ENSRNOG00000012271	Cnot1	100	99.958	Rattus_norvegicus
MGP_PahariEiJ_G0023028	Cnot1	100	97.291	ENSRBIG00000044598	CNOT1	100	97.291	Rhinopithecus_bieti
MGP_PahariEiJ_G0023028	Cnot1	100	99.411	ENSRROG00000000906	CNOT1	100	99.411	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023028	Cnot1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0023028	Cnot1	100	95.111	ENSSBOG00000029155	CNOT1	100	95.111	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023028	Cnot1	100	97.771	ENSSHAG00000012187	CNOT1	100	97.771	Sarcophilus_harrisii
MGP_PahariEiJ_G0023028	Cnot1	100	92.334	ENSSFOG00015017614	cnot1	100	92.074	Scleropages_formosus
MGP_PahariEiJ_G0023028	Cnot1	97	96.914	ENSSMAG00000013844	cnot1	100	96.914	Scophthalmus_maximus
MGP_PahariEiJ_G0023028	Cnot1	97	96.774	ENSSDUG00000021491	cnot1	100	96.774	Seriola_dumerili
MGP_PahariEiJ_G0023028	Cnot1	97	96.774	ENSSLDG00000014816	cnot1	100	96.774	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0023028	Cnot1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
MGP_PahariEiJ_G0023028	Cnot1	100	90.432	ENSSPAG00000018802	cnot1	100	90.222	Stegastes_partitus
MGP_PahariEiJ_G0023028	Cnot1	100	99.369	ENSSSCG00000002799	CNOT1	100	99.369	Sus_scrofa
MGP_PahariEiJ_G0023028	Cnot1	100	97.310	ENSTGUG00000005919	CNOT1	100	97.310	Taeniopygia_guttata
MGP_PahariEiJ_G0023028	Cnot1	100	88.945	ENSTNIG00000018706	cnot1	100	88.708	Tetraodon_nigroviridis
MGP_PahariEiJ_G0023028	Cnot1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
MGP_PahariEiJ_G0023028	Cnot1	95	99.301	ENSTTRG00000008460	CNOT1	95	99.301	Tursiops_truncatus
MGP_PahariEiJ_G0023028	Cnot1	100	99.495	ENSUAMG00000009251	CNOT1	100	99.495	Ursus_americanus
MGP_PahariEiJ_G0023028	Cnot1	100	99.495	ENSUMAG00000021291	CNOT1	100	99.495	Ursus_maritimus
MGP_PahariEiJ_G0023028	Cnot1	97	96.809	ENSVPAG00000008846	CNOT1	97	96.809	Vicugna_pacos
MGP_PahariEiJ_G0023028	Cnot1	100	98.365	ENSVVUG00000024037	CNOT1	100	98.974	Vulpes_vulpes
MGP_PahariEiJ_G0023028	Cnot1	100	90.092	ENSXETG00000015900	cnot1	100	89.882	Xenopus_tropicalis
MGP_PahariEiJ_G0023028	Cnot1	100	89.211	ENSXCOG00000013552	cnot1	100	89.169	Xiphophorus_couchianus
MGP_PahariEiJ_G0023028	Cnot1	100	89.253	ENSXMAG00000006031	cnot1	100	89.211	Xiphophorus_maculatus