EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023110 (Gene tree)
Gene ID: 110337252
Gene Symbol: Ddx28
Alias: 2410004K13Rik|Mddx28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 2273 bases
Position: chr20:29434831-29437103
Accession: 110337252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0054124	DEAD	PF00270.29	6.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0054124	-	2273	XM_021220052	MGP_PahariEiJ_P0054124	540 (aa)	XP_021075711	UPI000A30DA9E

Gene Model

Click here to download MGP_PahariEiJ_G0023110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0023110	Ddx28	68	30.542	MGP_PahariEiJ_G0024817	Ddx31	56	30.542
MGP_PahariEiJ_G0023110	Ddx28	66	31.025	MGP_PahariEiJ_G0020019	Ddx17	51	31.025
MGP_PahariEiJ_G0023110	Ddx28	67	38.710	MGP_PahariEiJ_G0029378	Ddx1	53	38.710
MGP_PahariEiJ_G0023110	Ddx28	68	32.190	MGP_PahariEiJ_G0021604	Ddx49	71	32.718
MGP_PahariEiJ_G0023110	Ddx28	70	30.423	MGP_PahariEiJ_G0015333	Ddx43	60	30.423
MGP_PahariEiJ_G0023110	Ddx28	67	32.075	MGP_PahariEiJ_G0027892	Ddx59	55	32.075
MGP_PahariEiJ_G0023110	Ddx28	72	32.824	MGP_PahariEiJ_G0022748	Ddx47	87	31.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023110	Ddx28	99	81.413	ENSG00000182810	DDX28	99	81.413	Homo_sapiens
MGP_PahariEiJ_G0023110	Ddx28	94	48.155	ENSAPOG00000000991	ddx28	89	48.155	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0023110	Ddx28	99	80.148	ENSAMEG00000019426	DDX28	99	79.221	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023110	Ddx28	93	48.155	ENSACIG00000021615	ddx28	90	48.155	Amphilophus_citrinellus
MGP_PahariEiJ_G0023110	Ddx28	94	48.356	ENSAOCG00000004610	ddx28	89	48.356	Amphiprion_ocellaris
MGP_PahariEiJ_G0023110	Ddx28	94	48.162	ENSAPEG00000002143	ddx28	89	48.162	Amphiprion_percula
MGP_PahariEiJ_G0023110	Ddx28	94	49.027	ENSATEG00000018691	ddx28	90	49.027	Anabas_testudineus
MGP_PahariEiJ_G0023110	Ddx28	94	53.757	ENSACAG00000009755	DDX28	94	53.757	Anolis_carolinensis
MGP_PahariEiJ_G0023110	Ddx28	93	47.471	ENSACLG00000012984	ddx28	89	47.471	Astatotilapia_calliptera
MGP_PahariEiJ_G0023110	Ddx28	93	48.190	ENSAMXG00000005878	ddx28	91	48.190	Astyanax_mexicanus
MGP_PahariEiJ_G0023110	Ddx28	96	81.574	ENSBTAG00000004290	DDX28	99	81.447	Bos_taurus
MGP_PahariEiJ_G0023110	Ddx28	98	80.151	ENSCAFG00000020327	DDX28	99	80.151	Canis_familiaris
MGP_PahariEiJ_G0023110	Ddx28	98	80.151	ENSCAFG00020019785	DDX28	99	80.151	Canis_lupus_dingo
MGP_PahariEiJ_G0023110	Ddx28	96	81.696	ENSCHIG00000009658	DDX28	99	81.227	Capra_hircus
MGP_PahariEiJ_G0023110	Ddx28	100	77.778	ENSCPOG00000013746	DDX28	97	78.695	Cavia_porcellus
MGP_PahariEiJ_G0023110	Ddx28	99	79.035	ENSCSAG00000018472	DDX28	99	79.035	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023110	Ddx28	90	60.285	ENSCPBG00000012105	DDX28	87	60.285	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023110	Ddx28	68	40.323	ENSCSAVG00000006341	-	94	40.323	Ciona_savignyi
MGP_PahariEiJ_G0023110	Ddx28	97	90.076	ENSCGRG00001024412	Ddx28	100	90.267	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023110	Ddx28	94	48.077	ENSCSEG00000011651	ddx28	90	48.077	Cynoglossus_semilaevis
MGP_PahariEiJ_G0023110	Ddx28	94	50.485	ENSCVAG00000004044	ddx28	90	50.485	Cyprinodon_variegatus
MGP_PahariEiJ_G0023110	Ddx28	93	49.511	ENSDARG00000060411	ddx28	90	49.511	Danio_rerio
MGP_PahariEiJ_G0023110	Ddx28	68	81.793	ENSDNOG00000033593	DDX28	99	81.793	Dasypus_novemcinctus
MGP_PahariEiJ_G0023110	Ddx28	99	80.334	ENSDORG00000028868	Ddx28	96	81.346	Dipodomys_ordii
MGP_PahariEiJ_G0023110	Ddx28	87	34.511	FBgn0086130	Dbp21E2	87	34.016	Drosophila_melanogaster
MGP_PahariEiJ_G0023110	Ddx28	100	77.778	ENSETEG00000001062	-	96	79.079	Echinops_telfairi
MGP_PahariEiJ_G0023110	Ddx28	77	48.438	ENSEBUG00000004791	ddx28	80	48.705	Eptatretus_burgeri
MGP_PahariEiJ_G0023110	Ddx28	100	82.593	ENSEASG00005020387	DDX28	100	82.593	Equus_asinus_asinus
MGP_PahariEiJ_G0023110	Ddx28	100	82.593	ENSECAG00000006451	DDX28	100	82.593	Equus_caballus
MGP_PahariEiJ_G0023110	Ddx28	78	71.838	ENSEEUG00000005017	DDX28	96	72.263	Erinaceus_europaeus
MGP_PahariEiJ_G0023110	Ddx28	93	49.806	ENSELUG00000005302	ddx28	97	49.423	Esox_lucius
MGP_PahariEiJ_G0023110	Ddx28	99	81.447	ENSFCAG00000012858	DDX28	99	81.447	Felis_catus
MGP_PahariEiJ_G0023110	Ddx28	93	49.902	ENSFHEG00000012573	ddx28	90	49.902	Fundulus_heteroclitus
MGP_PahariEiJ_G0023110	Ddx28	93	47.461	ENSGMOG00000017045	ddx28	95	47.461	Gadus_morhua
MGP_PahariEiJ_G0023110	Ddx28	93	51.248	ENSGALG00000048700	DDX28	88	52.015	Gallus_gallus
MGP_PahariEiJ_G0023110	Ddx28	93	49.020	ENSGAFG00000009249	ddx28	89	49.020	Gambusia_affinis
MGP_PahariEiJ_G0023110	Ddx28	93	49.805	ENSGACG00000016367	ddx28	94	49.805	Gasterosteus_aculeatus
MGP_PahariEiJ_G0023110	Ddx28	79	60.280	ENSGAGG00000004565	DDX28	93	60.280	Gopherus_agassizii
MGP_PahariEiJ_G0023110	Ddx28	99	81.784	ENSGGOG00000001220	DDX28	99	81.784	Gorilla_gorilla
MGP_PahariEiJ_G0023110	Ddx28	93	49.806	ENSHBUG00000001016	ddx28	90	49.806	Haplochromis_burtoni
MGP_PahariEiJ_G0023110	Ddx28	95	46.065	ENSHCOG00000017590	ddx28	93	46.065	Hippocampus_comes
MGP_PahariEiJ_G0023110	Ddx28	93	48.438	ENSIPUG00000017350	Ddx28	89	48.438	Ictalurus_punctatus
MGP_PahariEiJ_G0023110	Ddx28	100	80.926	ENSSTOG00000002064	DDX28	100	80.926	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023110	Ddx28	100	79.336	ENSJJAG00000012460	-	100	79.336	Jaculus_jaculus
MGP_PahariEiJ_G0023110	Ddx28	94	47.961	ENSKMAG00000018183	ddx28	90	47.961	Kryptolebias_marmoratus
MGP_PahariEiJ_G0023110	Ddx28	93	48.828	ENSLBEG00000006072	ddx28	90	48.828	Labrus_bergylta
MGP_PahariEiJ_G0023110	Ddx28	95	54.369	ENSLACG00000005578	DDX28	88	54.369	Latimeria_chalumnae
MGP_PahariEiJ_G0023110	Ddx28	95	52.390	ENSLOCG00000017604	ddx28	92	52.390	Lepisosteus_oculatus
MGP_PahariEiJ_G0023110	Ddx28	99	81.447	ENSLAFG00000031239	DDX28	99	81.447	Loxodonta_africana
MGP_PahariEiJ_G0023110	Ddx28	99	79.221	ENSMMUG00000010836	DDX28	99	79.221	Macaca_mulatta
MGP_PahariEiJ_G0023110	Ddx28	94	49.136	ENSMAMG00000020220	ddx28	90	49.136	Mastacembelus_armatus
MGP_PahariEiJ_G0023110	Ddx28	93	49.805	ENSMZEG00005009292	ddx28	90	49.805	Maylandia_zebra
MGP_PahariEiJ_G0023110	Ddx28	96	68.582	ENSMICG00000012346	-	99	68.519	Microcebus_murinus
MGP_PahariEiJ_G0023110	Ddx28	100	90.370	ENSMOCG00000009815	Ddx28	100	90.370	Microtus_ochrogaster
MGP_PahariEiJ_G0023110	Ddx28	95	48.362	ENSMMOG00000000270	ddx28	92	48.362	Mola_mola
MGP_PahariEiJ_G0023110	Ddx28	96	70.849	ENSMODG00000005303	DDX28	94	71.154	Monodelphis_domestica
MGP_PahariEiJ_G0023110	Ddx28	94	48.555	ENSMALG00000008864	ddx28	90	48.555	Monopterus_albus
MGP_PahariEiJ_G0023110	Ddx28	100	96.667	MGP_CAROLIEiJ_G0031510	Ddx28	100	96.667	Mus_caroli
MGP_PahariEiJ_G0023110	Ddx28	100	97.222	ENSMUSG00000045538	Ddx28	100	97.222	Mus_musculus
MGP_PahariEiJ_G0023110	Ddx28	100	97.222	MGP_SPRETEiJ_G0032628	Ddx28	100	97.222	Mus_spretus
MGP_PahariEiJ_G0023110	Ddx28	75	78.660	ENSMPUG00000006915	DDX28	100	78.660	Mustela_putorius_furo
MGP_PahariEiJ_G0023110	Ddx28	98	78.868	ENSMLUG00000005899	DDX28	98	78.868	Myotis_lucifugus
MGP_PahariEiJ_G0023110	Ddx28	96	85.192	ENSNGAG00000015762	Ddx28	96	85.577	Nannospalax_galili
MGP_PahariEiJ_G0023110	Ddx28	93	49.609	ENSNBRG00000001337	ddx28	91	49.609	Neolamprologus_brichardi
MGP_PahariEiJ_G0023110	Ddx28	93	49.805	ENSONIG00000020597	ddx28	90	49.805	Oreochromis_niloticus
MGP_PahariEiJ_G0023110	Ddx28	52	63.121	ENSOANG00000003551	-	98	63.121	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0023110	Ddx28	100	80.185	ENSOCUG00000023074	DDX28	100	80.185	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023110	Ddx28	93	48.638	ENSORLG00000011968	ddx28	90	48.638	Oryzias_latipes
MGP_PahariEiJ_G0023110	Ddx28	93	48.444	ENSORLG00020001951	ddx28	91	48.444	Oryzias_latipes_hni
MGP_PahariEiJ_G0023110	Ddx28	93	47.860	ENSORLG00015023030	ddx28	91	47.860	Oryzias_latipes_hsok
MGP_PahariEiJ_G0023110	Ddx28	94	47.471	ENSOMEG00000012445	ddx28	90	47.471	Oryzias_melastigma
MGP_PahariEiJ_G0023110	Ddx28	97	79.696	ENSOGAG00000016895	DDX28	99	79.444	Otolemur_garnettii
MGP_PahariEiJ_G0023110	Ddx28	82	78.604	ENSOARG00000003313	DDX28	99	78.604	Ovis_aries
MGP_PahariEiJ_G0023110	Ddx28	99	78.253	ENSPPAG00000036971	DDX28	99	78.253	Pan_paniscus
MGP_PahariEiJ_G0023110	Ddx28	99	82.746	ENSPPRG00000018322	DDX28	99	82.746	Panthera_pardus
MGP_PahariEiJ_G0023110	Ddx28	99	79.406	ENSPTIG00000006444	DDX28	99	79.406	Panthera_tigris_altaica
MGP_PahariEiJ_G0023110	Ddx28	99	81.599	ENSPTRG00000008258	DDX28	99	81.599	Pan_troglodytes
MGP_PahariEiJ_G0023110	Ddx28	93	49.513	ENSPKIG00000021200	ddx28	93	49.513	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023110	Ddx28	55	63.176	ENSPSIG00000001127	DDX28	97	63.176	Pelodiscus_sinensis
MGP_PahariEiJ_G0023110	Ddx28	92	45.759	ENSPMGG00000007908	ddx28	88	45.759	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0023110	Ddx28	100	88.192	ENSPEMG00000003395	Ddx28	100	88.192	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023110	Ddx28	52	51.237	ENSPMAG00000006983	DDX28	93	51.237	Petromyzon_marinus
MGP_PahariEiJ_G0023110	Ddx28	93	49.216	ENSPFOG00000020838	DDX28	89	49.216	Poecilia_formosa
MGP_PahariEiJ_G0023110	Ddx28	93	49.216	ENSPFOG00000020952	ddx28	88	49.216	Poecilia_formosa
MGP_PahariEiJ_G0023110	Ddx28	93	49.216	ENSPLAG00000016292	ddx28	88	49.216	Poecilia_latipinna
MGP_PahariEiJ_G0023110	Ddx28	93	49.216	ENSPMEG00000011311	ddx28	87	49.216	Poecilia_mexicana
MGP_PahariEiJ_G0023110	Ddx28	93	49.020	ENSPREG00000002899	ddx28	88	49.020	Poecilia_reticulata
MGP_PahariEiJ_G0023110	Ddx28	99	81.041	ENSPPYG00000007481	DDX28	100	81.041	Pongo_abelii
MGP_PahariEiJ_G0023110	Ddx28	100	81.885	ENSPCOG00000024632	DDX28	100	81.885	Propithecus_coquereli
MGP_PahariEiJ_G0023110	Ddx28	93	50.000	ENSPNYG00000018804	ddx28	90	50.000	Pundamilia_nyererei
MGP_PahariEiJ_G0023110	Ddx28	93	49.326	ENSPNAG00000014597	ddx28	94	49.326	Pygocentrus_nattereri
MGP_PahariEiJ_G0023110	Ddx28	99	92.764	ENSRNOG00000019817	Ddx28	99	92.764	Rattus_norvegicus
MGP_PahariEiJ_G0023110	Ddx28	93	50.097	ENSSFOG00015010181	ddx28	92	50.097	Scleropages_formosus
MGP_PahariEiJ_G0023110	Ddx28	93	48.054	ENSSMAG00000006831	ddx28	94	48.054	Scophthalmus_maximus
MGP_PahariEiJ_G0023110	Ddx28	93	47.184	ENSSDUG00000003257	ddx28	89	47.184	Seriola_dumerili
MGP_PahariEiJ_G0023110	Ddx28	93	47.184	ENSSLDG00000004513	ddx28	89	47.184	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0023110	Ddx28	99	78.108	ENSSARG00000014169	DDX28	99	78.108	Sorex_araneus
MGP_PahariEiJ_G0023110	Ddx28	99	47.145	ENSSPAG00000000988	ddx28	90	48.932	Stegastes_partitus
MGP_PahariEiJ_G0023110	Ddx28	100	81.852	ENSSSCG00000026038	DDX28	100	82.255	Sus_scrofa
MGP_PahariEiJ_G0023110	Ddx28	96	47.318	ENSTRUG00000007815	ddx28	94	47.893	Takifugu_rubripes
MGP_PahariEiJ_G0023110	Ddx28	94	49.112	ENSTNIG00000011352	ddx28	99	49.112	Tetraodon_nigroviridis
MGP_PahariEiJ_G0023110	Ddx28	87	87.215	ENSTBEG00000017695	DDX28	87	87.215	Tupaia_belangeri
MGP_PahariEiJ_G0023110	Ddx28	99	82.189	ENSUAMG00000016116	DDX28	99	82.189	Ursus_americanus
MGP_PahariEiJ_G0023110	Ddx28	81	82.192	ENSUMAG00000019200	DDX28	89	82.192	Ursus_maritimus
MGP_PahariEiJ_G0023110	Ddx28	81	77.854	ENSVVUG00000012876	DDX28	87	77.854	Vulpes_vulpes
MGP_PahariEiJ_G0023110	Ddx28	94	50.690	ENSXETG00000005435	ddx28	99	50.690	Xenopus_tropicalis
MGP_PahariEiJ_G0023110	Ddx28	93	49.216	ENSXCOG00000012364	ddx28	88	49.216	Xiphophorus_couchianus
MGP_PahariEiJ_G0023110	Ddx28	93	49.412	ENSXMAG00000019603	ddx28	91	49.412	Xiphophorus_maculatus