EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023139 (Gene tree)
Gene ID: 110337643
Gene Symbol: Zfhx3
Alias: A230102L03Rik|Atbf1|Sci|WBP9
Full Name: zinc finger homeobox 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 255251 bases
Position: chr20:32072369-32327619
Accession: 110337643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0054215	zf-C2H2	PF00096.26	1.6e-13	1	2
MGP_PahariEiJ_P0054215	zf-C2H2	PF00096.26	1.6e-13	2	2
MGP_PahariEiJ_P0054215	zf-met	PF12874.7	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0054215	-	16474	-	MGP_PahariEiJ_P0054215	3720 (aa)	XP_021076326	UPI000A311D7C
MGP_PahariEiJ_T0054214	-	1196	-	MGP_PahariEiJ_P0054214	17 (aa)	-	UPI0004621205

Gene Model

Click here to download MGP_PahariEiJ_G0023139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023139	Zfhx3	100	92.905	ENSG00000140836	ZFHX3	100	92.584	Homo_sapiens
MGP_PahariEiJ_G0023139	Zfhx3	100	91.401	ENSAMEG00000002197	ZFHX3	100	92.180	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023139	Zfhx3	86	65.316	ENSATEG00000004640	zfhx3	95	64.183	Anabas_testudineus
MGP_PahariEiJ_G0023139	Zfhx3	95	84.136	ENSAPLG00000002327	ZFHX3	99	84.334	Anas_platyrhynchos
MGP_PahariEiJ_G0023139	Zfhx3	100	93.101	ENSANAG00000033325	ZFHX3	100	93.317	Aotus_nancymaae
MGP_PahariEiJ_G0023139	Zfhx3	61	66.267	ENSAMXG00000004340	zfhx3	56	61.082	Astyanax_mexicanus
MGP_PahariEiJ_G0023139	Zfhx3	100	91.150	ENSBTAG00000014636	ZFHX3	100	91.929	Bos_taurus
MGP_PahariEiJ_G0023139	Zfhx3	100	93.564	ENSCJAG00000043080	ZFHX3	100	93.569	Callithrix_jacchus
MGP_PahariEiJ_G0023139	Zfhx3	100	92.655	ENSCAFG00000020243	ZFHX3	100	92.468	Canis_familiaris
MGP_PahariEiJ_G0023139	Zfhx3	100	92.559	ENSCAFG00020020336	ZFHX3	100	92.773	Canis_lupus_dingo
MGP_PahariEiJ_G0023139	Zfhx3	100	90.972	ENSCHIG00000018446	ZFHX3	100	91.671	Capra_hircus
MGP_PahariEiJ_G0023139	Zfhx3	100	91.620	ENSTSYG00000029930	ZFHX3	100	92.155	Carlito_syrichta
MGP_PahariEiJ_G0023139	Zfhx3	93	100.000	ENSCAPG00000010889	ZFHX3	99	96.610	Cavia_aperea
MGP_PahariEiJ_G0023139	Zfhx3	100	92.024	ENSCPOG00000009111	ZFHX3	100	91.734	Cavia_porcellus
MGP_PahariEiJ_G0023139	Zfhx3	100	92.803	ENSCCAG00000026346	ZFHX3	99	93.606	Cebus_capucinus
MGP_PahariEiJ_G0023139	Zfhx3	100	93.267	ENSCATG00000022545	ZFHX3	100	92.884	Cercocebus_atys
MGP_PahariEiJ_G0023139	Zfhx3	100	93.362	ENSCLAG00000007000	ZFHX3	100	92.967	Chinchilla_lanigera
MGP_PahariEiJ_G0023139	Zfhx3	100	93.022	ENSCSAG00000004171	ZFHX3	100	93.237	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023139	Zfhx3	100	93.101	ENSCANG00000034216	ZFHX3	100	93.049	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023139	Zfhx3	100	96.061	ENSCGRG00001012831	Zfhx3	100	96.061	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023139	Zfhx3	100	90.653	ENSCGRG00000001001	Zfhx3	100	90.813	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023139	Zfhx3	97	62.970	ENSCSEG00000001762	zfhx3	95	62.894	Cynoglossus_semilaevis
MGP_PahariEiJ_G0023139	Zfhx3	100	92.203	ENSDNOG00000046047	ZFHX3	100	91.640	Dasypus_novemcinctus
MGP_PahariEiJ_G0023139	Zfhx3	100	93.148	ENSEASG00005021387	ZFHX3	100	92.960	Equus_asinus_asinus
MGP_PahariEiJ_G0023139	Zfhx3	100	93.173	ENSECAG00000022984	ZFHX3	100	92.985	Equus_caballus
MGP_PahariEiJ_G0023139	Zfhx3	84	92.356	ENSEEUG00000008705	ZFHX3	92	91.126	Erinaceus_europaeus
MGP_PahariEiJ_G0023139	Zfhx3	97	64.177	ENSELUG00000014311	zfhx3	100	62.619	Esox_lucius
MGP_PahariEiJ_G0023139	Zfhx3	100	93.076	ENSFCAG00000023839	ZFHX3	100	93.022	Felis_catus
MGP_PahariEiJ_G0023139	Zfhx3	96	87.041	ENSFALG00000002706	ZFHX3	96	86.917	Ficedula_albicollis
MGP_PahariEiJ_G0023139	Zfhx3	100	92.248	ENSFDAG00000015753	ZFHX3	100	91.607	Fukomys_damarensis
MGP_PahariEiJ_G0023139	Zfhx3	86	64.330	ENSFHEG00000013474	zfhx3	100	69.028	Fundulus_heteroclitus
MGP_PahariEiJ_G0023139	Zfhx3	85	65.558	ENSGMOG00000002909	zfhx3	100	63.008	Gadus_morhua
MGP_PahariEiJ_G0023139	Zfhx3	100	85.167	ENSGALG00000000713	ZFHX3	100	85.615	Gallus_gallus
MGP_PahariEiJ_G0023139	Zfhx3	97	63.305	ENSGAFG00000017278	zfhx3	95	63.553	Gambusia_affinis
MGP_PahariEiJ_G0023139	Zfhx3	86	64.881	ENSGACG00000015779	zfhx3	100	62.029	Gasterosteus_aculeatus
MGP_PahariEiJ_G0023139	Zfhx3	66	84.909	ENSGAGG00000002102	ZFHX3	100	85.814	Gopherus_agassizii
MGP_PahariEiJ_G0023139	Zfhx3	99	92.902	ENSGGOG00000012083	ZFHX3	100	92.410	Gorilla_gorilla
MGP_PahariEiJ_G0023139	Zfhx3	100	92.625	ENSHGLG00000012541	ZFHX3	100	92.225	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023139	Zfhx3	100	92.089	ENSHGLG00100000797	ZFHX3	100	91.823	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023139	Zfhx3	71	66.988	ENSHCOG00000003135	zfhx3	86	63.842	Hippocampus_comes
MGP_PahariEiJ_G0023139	Zfhx3	97	64.492	ENSIPUG00000006119	zfhx3	95	64.487	Ictalurus_punctatus
MGP_PahariEiJ_G0023139	Zfhx3	100	93.626	ENSSTOG00000027206	ZFHX3	100	93.224	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023139	Zfhx3	86	64.884	ENSKMAG00000006781	zfhx3	95	63.818	Kryptolebias_marmoratus
MGP_PahariEiJ_G0023139	Zfhx3	97	66.641	ENSLOCG00000004206	zfhx3	100	65.077	Lepisosteus_oculatus
MGP_PahariEiJ_G0023139	Zfhx3	100	92.363	ENSLAFG00000017476	ZFHX3	100	92.712	Loxodonta_africana
MGP_PahariEiJ_G0023139	Zfhx3	100	94.064	ENSMFAG00000034225	ZFHX3	100	93.634	Macaca_fascicularis
MGP_PahariEiJ_G0023139	Zfhx3	100	93.983	ENSMMUG00000021041	ZFHX3	100	93.151	Macaca_mulatta
MGP_PahariEiJ_G0023139	Zfhx3	100	94.012	ENSMNEG00000030137	ZFHX3	100	93.555	Macaca_nemestrina
MGP_PahariEiJ_G0023139	Zfhx3	100	93.795	ENSMLEG00000042563	ZFHX3	100	93.557	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023139	Zfhx3	97	63.235	ENSMAMG00000021509	zfhx3	95	64.323	Mastacembelus_armatus
MGP_PahariEiJ_G0023139	Zfhx3	78	88.269	ENSMGAG00000008764	ZFHX3	88	90.361	Meleagris_gallopavo
MGP_PahariEiJ_G0023139	Zfhx3	100	95.385	ENSMAUG00000000602	Zfhx3	100	95.385	Mesocricetus_auratus
MGP_PahariEiJ_G0023139	Zfhx3	100	93.239	ENSMICG00000003537	ZFHX3	100	93.400	Microcebus_murinus
MGP_PahariEiJ_G0023139	Zfhx3	100	95.836	ENSMOCG00000017998	Zfhx3	100	95.836	Microtus_ochrogaster
MGP_PahariEiJ_G0023139	Zfhx3	86	65.437	ENSMMOG00000016551	zfhx3	95	64.464	Mola_mola
MGP_PahariEiJ_G0023139	Zfhx3	100	98.525	ENSMUSG00000038872	Zfhx3	100	98.525	Mus_musculus
MGP_PahariEiJ_G0023139	Zfhx3	100	98.525	MGP_SPRETEiJ_G0032657	Zfhx3	100	98.525	Mus_spretus
MGP_PahariEiJ_G0023139	Zfhx3	57	93.099	ENSMPUG00000007747	ZFHX3	100	91.717	Mustela_putorius_furo
MGP_PahariEiJ_G0023139	Zfhx3	100	91.597	ENSMLUG00000016100	ZFHX3	100	91.973	Myotis_lucifugus
MGP_PahariEiJ_G0023139	Zfhx3	100	91.353	ENSNGAG00000001724	Zfhx3	100	91.568	Nannospalax_galili
MGP_PahariEiJ_G0023139	Zfhx3	88	91.687	ENSNLEG00000032567	ZFHX3	99	91.565	Nomascus_leucogenys
MGP_PahariEiJ_G0023139	Zfhx3	100	90.688	ENSODEG00000014257	ZFHX3	100	90.582	Octodon_degus
MGP_PahariEiJ_G0023139	Zfhx3	62	77.199	ENSONIG00000005914	zfhx3	98	71.397	Oreochromis_niloticus
MGP_PahariEiJ_G0023139	Zfhx3	86	90.127	ENSOANG00000005084	ZFHX3	100	89.002	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0023139	Zfhx3	87	91.989	ENSOCUG00000017910	-	99	92.422	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023139	Zfhx3	82	65.862	ENSORLG00000007874	zfhx3	95	63.424	Oryzias_latipes
MGP_PahariEiJ_G0023139	Zfhx3	97	63.586	ENSORLG00020009729	zfhx3	95	63.450	Oryzias_latipes_hni
MGP_PahariEiJ_G0023139	Zfhx3	97	62.914	ENSORLG00015007912	zfhx3	95	63.214	Oryzias_latipes_hsok
MGP_PahariEiJ_G0023139	Zfhx3	97	62.942	ENSOMEG00000001800	zfhx3	95	63.315	Oryzias_melastigma
MGP_PahariEiJ_G0023139	Zfhx3	100	91.866	ENSPPRG00000005184	ZFHX3	100	92.161	Panthera_pardus
MGP_PahariEiJ_G0023139	Zfhx3	100	92.838	ENSPTRG00000008340	ZFHX3	100	92.623	Pan_troglodytes
MGP_PahariEiJ_G0023139	Zfhx3	100	93.742	ENSPANG00000010456	ZFHX3	100	93.580	Papio_anubis
MGP_PahariEiJ_G0023139	Zfhx3	84	64.591	ENSPKIG00000001525	-	95	62.553	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023139	Zfhx3	90	73.047	ENSPKIG00000009598	zfhx3	93	65.411	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023139	Zfhx3	100	95.957	ENSPEMG00000010630	Zfhx3	100	95.957	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023139	Zfhx3	97	62.977	ENSPFOG00000001702	zfhx3	95	63.720	Poecilia_formosa
MGP_PahariEiJ_G0023139	Zfhx3	97	63.335	ENSPLAG00000018955	zfhx3	95	63.872	Poecilia_latipinna
MGP_PahariEiJ_G0023139	Zfhx3	97	63.039	ENSPMEG00000022333	zfhx3	100	62.021	Poecilia_mexicana
MGP_PahariEiJ_G0023139	Zfhx3	85	93.622	ENSPPYG00000007513	ZFHX3	100	93.467	Pongo_abelii
MGP_PahariEiJ_G0023139	Zfhx3	87	90.918	ENSPCAG00000010600	ZFHX3	99	90.856	Procavia_capensis
MGP_PahariEiJ_G0023139	Zfhx3	100	93.160	ENSPCOG00000025382	ZFHX3	100	93.294	Propithecus_coquereli
MGP_PahariEiJ_G0023139	Zfhx3	96	91.028	ENSPVAG00000006664	ZFHX3	96	91.685	Pteropus_vampyrus
MGP_PahariEiJ_G0023139	Zfhx3	100	97.193	ENSRNOG00000014452	Zfhx3	100	97.193	Rattus_norvegicus
MGP_PahariEiJ_G0023139	Zfhx3	100	91.758	ENSRBIG00000031579	ZFHX3	100	91.492	Rhinopithecus_bieti
MGP_PahariEiJ_G0023139	Zfhx3	100	94.015	ENSRROG00000039904	ZFHX3	100	93.614	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023139	Zfhx3	91	93.566	ENSSBOG00000034332	ZFHX3	96	93.626	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023139	Zfhx3	93	72.308	ENSSFOG00015014986	zfhx3	96	63.918	Scleropages_formosus
MGP_PahariEiJ_G0023139	Zfhx3	84	65.783	ENSSFOG00015019511	zfhx3	98	63.195	Scleropages_formosus
MGP_PahariEiJ_G0023139	Zfhx3	100	92.394	ENSSSCG00000002752	ZFHX3	100	91.811	Sus_scrofa
MGP_PahariEiJ_G0023139	Zfhx3	95	84.749	ENSTGUG00000008190	ZFHX3	94	85.137	Taeniopygia_guttata
MGP_PahariEiJ_G0023139	Zfhx3	86	64.828	ENSTRUG00000017601	zfhx3	95	64.035	Takifugu_rubripes
MGP_PahariEiJ_G0023139	Zfhx3	100	92.661	ENSVVUG00000017344	ZFHX3	100	92.207	Vulpes_vulpes