EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023334 (Gene tree)
Gene ID: 110338050
Gene Symbol: Scaf8
Alias: A630086M08Rik|A930036P18Rik|Rbm16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 83095 bases
Position: chr21:14197-97291
Accession: 110338050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0054858	RRM_1	PF00076.22	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0054858	-	4888	XM_021221239	MGP_PahariEiJ_P0054858	1268 (aa)	XP_021076898	UPI000A31264F

Gene Model

Click here to download MGP_PahariEiJ_G0023334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023334	Scaf8	100	92.132	ENSG00000213079	SCAF8	100	92.132	Homo_sapiens
MGP_PahariEiJ_G0023334	Scaf8	86	70.061	ENSAPOG00000015527	SCAF8	77	69.693	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0023334	Scaf8	100	90.163	ENSAMEG00000007583	SCAF8	97	90.163	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023334	Scaf8	86	70.184	ENSAOCG00000002421	SCAF8	76	69.816	Amphiprion_ocellaris
MGP_PahariEiJ_G0023334	Scaf8	85	70.472	ENSATEG00000006959	SCAF8	97	66.626	Anabas_testudineus
MGP_PahariEiJ_G0023334	Scaf8	100	76.265	ENSAPLG00000005765	SCAF8	100	76.498	Anas_platyrhynchos
MGP_PahariEiJ_G0023334	Scaf8	99	73.978	ENSACAG00000005282	SCAF8	99	73.899	Anolis_carolinensis
MGP_PahariEiJ_G0023334	Scaf8	100	92.054	ENSANAG00000036184	SCAF8	100	92.054	Aotus_nancymaae
MGP_PahariEiJ_G0023334	Scaf8	82	73.298	ENSACLG00000018828	SCAF8	78	72.775	Astatotilapia_calliptera
MGP_PahariEiJ_G0023334	Scaf8	100	91.411	ENSBTAG00000031917	SCAF8	100	91.411	Bos_taurus
MGP_PahariEiJ_G0023334	Scaf8	100	91.975	ENSCJAG00000012631	SCAF8	97	90.480	Callithrix_jacchus
MGP_PahariEiJ_G0023334	Scaf8	99	91.924	ENSCAFG00000000570	SCAF8	99	91.924	Canis_familiaris
MGP_PahariEiJ_G0023334	Scaf8	99	91.918	ENSCAFG00020015048	SCAF8	99	91.864	Canis_lupus_dingo
MGP_PahariEiJ_G0023334	Scaf8	100	90.938	ENSCHIG00000025041	SCAF8	100	90.938	Capra_hircus
MGP_PahariEiJ_G0023334	Scaf8	99	91.528	ENSTSYG00000010991	SCAF8	97	91.528	Carlito_syrichta
MGP_PahariEiJ_G0023334	Scaf8	99	84.019	ENSCPOG00000022216	-	99	83.228	Cavia_porcellus
MGP_PahariEiJ_G0023334	Scaf8	100	92.132	ENSCCAG00000024952	SCAF8	100	92.132	Cebus_capucinus
MGP_PahariEiJ_G0023334	Scaf8	100	92.526	ENSCATG00000035361	SCAF8	100	92.526	Cercocebus_atys
MGP_PahariEiJ_G0023334	Scaf8	100	91.489	ENSCLAG00000004910	SCAF8	100	91.978	Chinchilla_lanigera
MGP_PahariEiJ_G0023334	Scaf8	100	91.099	ENSCSAG00000013430	SCAF8	100	91.099	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023334	Scaf8	100	73.824	ENSCPBG00000016330	SCAF8	100	73.235	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023334	Scaf8	100	92.290	ENSCANG00000039499	SCAF8	99	92.228	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023334	Scaf8	100	96.612	ENSCGRG00001020167	Scaf8	100	96.612	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023334	Scaf8	99	96.508	ENSCGRG00000004120	Scaf8	99	96.508	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023334	Scaf8	83	70.341	ENSCSEG00000000043	-	76	71.654	Cynoglossus_semilaevis
MGP_PahariEiJ_G0023334	Scaf8	89	66.885	ENSCVAG00000000925	SCAF8	77	66.536	Cyprinodon_variegatus
MGP_PahariEiJ_G0023334	Scaf8	96	86.125	ENSDNOG00000025271	SCAF8	100	89.737	Dasypus_novemcinctus
MGP_PahariEiJ_G0023334	Scaf8	99	90.931	ENSDORG00000006391	Scaf8	100	91.009	Dipodomys_ordii
MGP_PahariEiJ_G0023334	Scaf8	100	91.739	ENSEASG00005018879	SCAF8	100	91.739	Equus_asinus_asinus
MGP_PahariEiJ_G0023334	Scaf8	100	91.890	ENSECAG00000005540	SCAF8	100	91.890	Equus_caballus
MGP_PahariEiJ_G0023334	Scaf8	81	71.244	ENSELUG00000002779	SCAF8	73	70.505	Esox_lucius
MGP_PahariEiJ_G0023334	Scaf8	100	92.126	ENSFCAG00000023424	SCAF8	100	92.126	Felis_catus
MGP_PahariEiJ_G0023334	Scaf8	100	75.779	ENSFALG00000012433	SCAF8	100	75.953	Ficedula_albicollis
MGP_PahariEiJ_G0023334	Scaf8	100	90.952	ENSFDAG00000010335	SCAF8	100	90.952	Fukomys_damarensis
MGP_PahariEiJ_G0023334	Scaf8	89	71.597	ENSFHEG00000008284	SCAF8	77	71.335	Fundulus_heteroclitus
MGP_PahariEiJ_G0023334	Scaf8	80	58.023	ENSGMOG00000018812	SCAF8	83	59.531	Gadus_morhua
MGP_PahariEiJ_G0023334	Scaf8	99	77.181	ENSGALG00000013635	SCAF8	99	76.791	Gallus_gallus
MGP_PahariEiJ_G0023334	Scaf8	55	59.544	ENSGAFG00000018033	SCAF8	78	65.399	Gambusia_affinis
MGP_PahariEiJ_G0023334	Scaf8	82	69.190	ENSGACG00000006909	SCAF8	100	54.307	Gasterosteus_aculeatus
MGP_PahariEiJ_G0023334	Scaf8	63	69.667	ENSGAGG00000017820	-	88	69.667	Gopherus_agassizii
MGP_PahariEiJ_G0023334	Scaf8	100	92.054	ENSGGOG00000008645	SCAF8	100	92.054	Gorilla_gorilla
MGP_PahariEiJ_G0023334	Scaf8	83	73.168	ENSHBUG00000019537	SCAF8	78	72.644	Haplochromis_burtoni
MGP_PahariEiJ_G0023334	Scaf8	100	91.660	ENSHGLG00000003619	SCAF8	100	91.660	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023334	Scaf8	100	91.031	ENSHGLG00100004708	SCAF8	100	91.594	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023334	Scaf8	99	92.642	ENSSTOG00000026043	SCAF8	99	92.642	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023334	Scaf8	100	91.811	ENSJJAG00000020480	Scaf8	100	91.811	Jaculus_jaculus
MGP_PahariEiJ_G0023334	Scaf8	93	69.287	ENSKMAG00000012767	SCAF8	78	68.919	Kryptolebias_marmoratus
MGP_PahariEiJ_G0023334	Scaf8	59	76.296	ENSLBEG00000012484	-	55	75.926	Labrus_bergylta
MGP_PahariEiJ_G0023334	Scaf8	88	75.607	ENSLACG00000001394	SCAF8	99	72.694	Latimeria_chalumnae
MGP_PahariEiJ_G0023334	Scaf8	100	61.502	ENSLOCG00000016856	SCAF8	100	60.658	Lepisosteus_oculatus
MGP_PahariEiJ_G0023334	Scaf8	100	90.181	ENSLAFG00000000022	SCAF8	100	90.731	Loxodonta_africana
MGP_PahariEiJ_G0023334	Scaf8	100	92.604	ENSMFAG00000032738	SCAF8	100	92.604	Macaca_fascicularis
MGP_PahariEiJ_G0023334	Scaf8	100	92.604	ENSMMUG00000015163	SCAF8	100	92.604	Macaca_mulatta
MGP_PahariEiJ_G0023334	Scaf8	100	92.604	ENSMNEG00000043466	SCAF8	100	92.604	Macaca_nemestrina
MGP_PahariEiJ_G0023334	Scaf8	99	92.546	ENSMLEG00000034845	SCAF8	99	92.546	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023334	Scaf8	83	66.667	ENSMAMG00000009457	SCAF8	76	65.755	Mastacembelus_armatus
MGP_PahariEiJ_G0023334	Scaf8	82	73.168	ENSMZEG00005005698	SCAF8	80	72.644	Maylandia_zebra
MGP_PahariEiJ_G0023334	Scaf8	99	75.963	ENSMGAG00000012762	SCAF8	100	76.516	Meleagris_gallopavo
MGP_PahariEiJ_G0023334	Scaf8	99	95.949	ENSMAUG00000009513	Scaf8	100	95.949	Mesocricetus_auratus
MGP_PahariEiJ_G0023334	Scaf8	100	91.431	ENSMICG00000028965	SCAF8	100	91.274	Microcebus_murinus
MGP_PahariEiJ_G0023334	Scaf8	100	96.690	ENSMOCG00000014950	Scaf8	100	96.690	Microtus_ochrogaster
MGP_PahariEiJ_G0023334	Scaf8	84	65.069	ENSMMOG00000002216	SCAF8	78	64.061	Mola_mola
MGP_PahariEiJ_G0023334	Scaf8	99	84.731	ENSMODG00000008301	SCAF8	99	84.731	Monodelphis_domestica
MGP_PahariEiJ_G0023334	Scaf8	86	69.033	ENSMALG00000011584	SCAF8	78	68.949	Monopterus_albus
MGP_PahariEiJ_G0023334	Scaf8	100	98.423	MGP_CAROLIEiJ_G0021016	Scaf8	100	98.423	Mus_caroli
MGP_PahariEiJ_G0023334	Scaf8	100	98.502	ENSMUSG00000046201	Scaf8	100	98.502	Mus_musculus
MGP_PahariEiJ_G0023334	Scaf8	100	90.085	ENSMPUG00000001974	SCAF8	100	90.085	Mustela_putorius_furo
MGP_PahariEiJ_G0023334	Scaf8	100	89.685	ENSMLUG00000029190	SCAF8	100	89.685	Myotis_lucifugus
MGP_PahariEiJ_G0023334	Scaf8	100	93.775	ENSNGAG00000012332	Scaf8	100	93.775	Nannospalax_galili
MGP_PahariEiJ_G0023334	Scaf8	90	69.685	ENSNBRG00000009067	SCAF8	96	69.160	Neolamprologus_brichardi
MGP_PahariEiJ_G0023334	Scaf8	100	90.816	ENSNLEG00000015509	SCAF8	99	90.487	Nomascus_leucogenys
MGP_PahariEiJ_G0023334	Scaf8	70	90.179	ENSOPRG00000018413	-	76	91.011	Ochotona_princeps
MGP_PahariEiJ_G0023334	Scaf8	100	91.352	ENSODEG00000007296	SCAF8	100	91.352	Octodon_degus
MGP_PahariEiJ_G0023334	Scaf8	100	55.452	ENSONIG00000008119	SCAF8	99	54.771	Oreochromis_niloticus
MGP_PahariEiJ_G0023334	Scaf8	99	92.642	ENSOCUG00000026063	SCAF8	99	92.642	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023334	Scaf8	93	56.440	ENSORLG00000017358	SCAF8	75	71.990	Oryzias_latipes
MGP_PahariEiJ_G0023334	Scaf8	93	56.686	ENSORLG00020002214	SCAF8	75	72.120	Oryzias_latipes_hni
MGP_PahariEiJ_G0023334	Scaf8	93	56.568	ENSORLG00015015779	SCAF8	75	72.251	Oryzias_latipes_hsok
MGP_PahariEiJ_G0023334	Scaf8	93	56.551	ENSOMEG00000015471	SCAF8	75	72.251	Oryzias_melastigma
MGP_PahariEiJ_G0023334	Scaf8	100	90.015	ENSOGAG00000034223	SCAF8	97	90.015	Otolemur_garnettii
MGP_PahariEiJ_G0023334	Scaf8	99	90.714	ENSOARG00000004159	SCAF8	100	90.714	Ovis_aries
MGP_PahariEiJ_G0023334	Scaf8	100	91.975	ENSPPAG00000039826	SCAF8	100	91.975	Pan_paniscus
MGP_PahariEiJ_G0023334	Scaf8	100	92.126	ENSPPRG00000023175	SCAF8	100	92.126	Panthera_pardus
MGP_PahariEiJ_G0023334	Scaf8	99	91.997	ENSPTIG00000014836	SCAF8	100	91.997	Panthera_tigris_altaica
MGP_PahariEiJ_G0023334	Scaf8	100	92.132	ENSPTRG00000018727	SCAF8	100	92.132	Pan_troglodytes
MGP_PahariEiJ_G0023334	Scaf8	100	92.447	ENSPANG00000017489	SCAF8	100	90.480	Papio_anubis
MGP_PahariEiJ_G0023334	Scaf8	100	57.551	ENSPKIG00000021212	SCAF8	98	75.131	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023334	Scaf8	89	69.875	ENSPSIG00000008614	SCAF8	99	70.780	Pelodiscus_sinensis
MGP_PahariEiJ_G0023334	Scaf8	99	96.585	ENSPEMG00000010531	Scaf8	100	96.585	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023334	Scaf8	100	84.984	ENSPCIG00000001141	SCAF8	100	84.984	Phascolarctos_cinereus
MGP_PahariEiJ_G0023334	Scaf8	53	54.745	ENSPFOG00000004176	SCAF8	100	54.737	Poecilia_formosa
MGP_PahariEiJ_G0023334	Scaf8	93	66.284	ENSPLAG00000021432	SCAF8	77	65.826	Poecilia_latipinna
MGP_PahariEiJ_G0023334	Scaf8	56	59.659	ENSPMEG00000007591	SCAF8	84	65.311	Poecilia_mexicana
MGP_PahariEiJ_G0023334	Scaf8	93	69.127	ENSPREG00000000652	SCAF8	77	68.635	Poecilia_reticulata
MGP_PahariEiJ_G0023334	Scaf8	100	90.809	ENSPPYG00000017121	SCAF8	100	90.495	Pongo_abelii
MGP_PahariEiJ_G0023334	Scaf8	85	95.980	ENSPCAG00000013044	SCAF8	90	95.980	Procavia_capensis
MGP_PahariEiJ_G0023334	Scaf8	100	91.745	ENSPCOG00000002067	SCAF8	99	91.521	Propithecus_coquereli
MGP_PahariEiJ_G0023334	Scaf8	98	89.120	ENSPVAG00000005582	SCAF8	99	90.240	Pteropus_vampyrus
MGP_PahariEiJ_G0023334	Scaf8	82	73.298	ENSPNYG00000007277	SCAF8	78	72.775	Pundamilia_nyererei
MGP_PahariEiJ_G0023334	Scaf8	87	68.376	ENSPNAG00000024740	SCAF8	82	68.704	Pygocentrus_nattereri
MGP_PahariEiJ_G0023334	Scaf8	100	97.319	ENSRNOG00000016919	Scaf8	100	97.319	Rattus_norvegicus
MGP_PahariEiJ_G0023334	Scaf8	100	92.368	ENSRBIG00000035769	SCAF8	100	92.368	Rhinopithecus_bieti
MGP_PahariEiJ_G0023334	Scaf8	100	92.290	ENSRROG00000013580	SCAF8	100	92.290	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023334	Scaf8	100	92.054	ENSSBOG00000027023	SCAF8	100	92.054	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023334	Scaf8	100	84.525	ENSSHAG00000009915	SCAF8	100	84.525	Sarcophilus_harrisii
MGP_PahariEiJ_G0023334	Scaf8	100	55.031	ENSSFOG00015009481	SCAF8	93	69.129	Scleropages_formosus
MGP_PahariEiJ_G0023334	Scaf8	86	69.240	ENSSMAG00000008275	SCAF8	77	68.627	Scophthalmus_maximus
MGP_PahariEiJ_G0023334	Scaf8	100	75.774	ENSSPUG00000015219	SCAF8	100	76.075	Sphenodon_punctatus
MGP_PahariEiJ_G0023334	Scaf8	100	91.339	ENSSSCG00000004070	SCAF8	100	91.339	Sus_scrofa
MGP_PahariEiJ_G0023334	Scaf8	99	77.516	ENSTGUG00000011151	SCAF8	100	77.673	Taeniopygia_guttata
MGP_PahariEiJ_G0023334	Scaf8	82	70.719	ENSTRUG00000009243	SCAF8	76	70.458	Takifugu_rubripes
MGP_PahariEiJ_G0023334	Scaf8	93	65.777	ENSTNIG00000016885	SCAF8	99	54.560	Tetraodon_nigroviridis
MGP_PahariEiJ_G0023334	Scaf8	99	90.556	ENSTTRG00000014538	SCAF8	100	90.556	Tursiops_truncatus
MGP_PahariEiJ_G0023334	Scaf8	100	91.496	ENSUAMG00000024736	SCAF8	99	91.429	Ursus_americanus
MGP_PahariEiJ_G0023334	Scaf8	98	91.406	ENSUMAG00000013404	SCAF8	100	91.406	Ursus_maritimus
MGP_PahariEiJ_G0023334	Scaf8	67	82.305	ENSVPAG00000012465	SCAF8	99	81.149	Vicugna_pacos
MGP_PahariEiJ_G0023334	Scaf8	99	91.997	ENSVVUG00000007532	SCAF8	100	91.968	Vulpes_vulpes
MGP_PahariEiJ_G0023334	Scaf8	100	60.964	ENSXETG00000013132	scaf8	99	61.154	Xenopus_tropicalis
MGP_PahariEiJ_G0023334	Scaf8	93	69.127	ENSXMAG00000019192	SCAF8	78	68.758	Xiphophorus_maculatus