EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023344 (Gene tree)
Gene ID: 110338390
Gene Symbol: Synj2
Alias: SJ2
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 98666 bases
Position: chr21:2753850-2852515
Accession: 110338390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0054881	Exo_endo_phos	PF03372.23	4e-14	1	1
MGP_PahariEiJ_P0054891	Exo_endo_phos	PF03372.23	4.4e-14	1	1
MGP_PahariEiJ_P0054888	Exo_endo_phos	PF03372.23	6.1e-14	1	1
MGP_PahariEiJ_P0054885	Exo_endo_phos	PF03372.23	9.4e-14	1	1
MGP_PahariEiJ_P0054877	Exo_endo_phos	PF03372.23	1.1e-13	1	1
MGP_PahariEiJ_P0054889	Exo_endo_phos	PF03372.23	1.1e-13	1	1
MGP_PahariEiJ_P0054882	Exo_endo_phos	PF03372.23	1.2e-13	1	1
MGP_PahariEiJ_P0054886	Exo_endo_phos	PF03372.23	1.3e-13	1	1
MGP_PahariEiJ_P0054884	Exo_endo_phos	PF03372.23	1.5e-13	1	1
MGP_PahariEiJ_P0054883	Exo_endo_phos	PF03372.23	1.6e-13	1	1
MGP_PahariEiJ_P0054878	Exo_endo_phos	PF03372.23	1.8e-13	1	1
MGP_PahariEiJ_P0054880	Exo_endo_phos	PF03372.23	1.8e-13	1	1
MGP_PahariEiJ_P0054887	Exo_endo_phos	PF03372.23	1e-08	1	1
MGP_PahariEiJ_P0054892	DUF1866	PF08952.11	2e-60	1	1
MGP_PahariEiJ_P0054891	DUF1866	PF08952.11	5.5e-60	1	1
MGP_PahariEiJ_P0054888	DUF1866	PF08952.11	6.7e-60	1	1
MGP_PahariEiJ_P0054885	DUF1866	PF08952.11	9.2e-60	1	1
MGP_PahariEiJ_P0054877	DUF1866	PF08952.11	1.1e-59	1	1
MGP_PahariEiJ_P0054889	DUF1866	PF08952.11	1.1e-59	1	1
MGP_PahariEiJ_P0054882	DUF1866	PF08952.11	1.2e-59	1	1
MGP_PahariEiJ_P0054886	DUF1866	PF08952.11	1.2e-59	1	1
MGP_PahariEiJ_P0054884	DUF1866	PF08952.11	1.3e-59	1	1
MGP_PahariEiJ_P0054883	DUF1866	PF08952.11	1.5e-59	1	1
MGP_PahariEiJ_P0054880	DUF1866	PF08952.11	1.5e-59	1	1
MGP_PahariEiJ_P0054878	DUF1866	PF08952.11	1.6e-59	1	1
MGP_PahariEiJ_P0054881	DUF1866	PF08952.11	6.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0054889	-	3778	XM_021221732	MGP_PahariEiJ_P0054889	1118 (aa)	XP_021077391	UPI000A308B0F
MGP_PahariEiJ_T0054888	-	2636	-	MGP_PahariEiJ_P0054888	825 (aa)	-	-
MGP_PahariEiJ_T0054886	-	4012	XM_021221729	MGP_PahariEiJ_P0054886	1194 (aa)	XP_021077388	UPI000A30FB15
MGP_PahariEiJ_T0054880	-	4826	-	MGP_PahariEiJ_P0054880	1434 (aa)	XP_021077386	UPI000A309B8A
MGP_PahariEiJ_T0054881	-	2535	-	MGP_PahariEiJ_P0054881	660 (aa)	-	-
MGP_PahariEiJ_T0054882	-	4084	XM_021221728	MGP_PahariEiJ_P0054882	1216 (aa)	XP_021077387	UPI000A311B12
MGP_PahariEiJ_T0054883	-	4852	-	MGP_PahariEiJ_P0054883	1394 (aa)	-	-
MGP_PahariEiJ_T0054884	-	5185	-	MGP_PahariEiJ_P0054884	1273 (aa)	-	-
MGP_PahariEiJ_T0054885	-	3498	-	MGP_PahariEiJ_P0054885	1016 (aa)	-	-
MGP_PahariEiJ_T0054877	-	3563	-	MGP_PahariEiJ_P0054877	1144 (aa)	-	-
MGP_PahariEiJ_T0054887	-	2511	-	MGP_PahariEiJ_P0054887	540 (aa)	-	-
MGP_PahariEiJ_T0054879	-	5593	-	MGP_PahariEiJ_P0054879	84 (aa)	-	-
MGP_PahariEiJ_T0054878	-	5156	XM_021221726	MGP_PahariEiJ_P0054878	1479 (aa)	XP_021077385	UPI000A30BF59
MGP_PahariEiJ_T0054892	-	1260	-	MGP_PahariEiJ_P0054892	384 (aa)	-	-
MGP_PahariEiJ_T0054891	-	2791	-	MGP_PahariEiJ_P0054891	725 (aa)	-	-
MGP_PahariEiJ_T0054890	-	460	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0023344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0023344	Synj2	99	59.431	MGP_PahariEiJ_G0016656	Synj1	100	59.626
MGP_PahariEiJ_G0023344	Synj2	50	34.218	MGP_PahariEiJ_G0016879	Inpp5j	56	34.218

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023344	Synj2	100	93.030	ENSG00000078269	SYNJ2	99	87.407	Homo_sapiens
MGP_PahariEiJ_G0023344	Synj2	100	91.212	ENSAMEG00000009581	SYNJ2	99	80.484	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023344	Synj2	100	84.720	ENSAPLG00000002563	SYNJ2	99	69.210	Anas_platyrhynchos
MGP_PahariEiJ_G0023344	Synj2	100	81.818	ENSACAG00000004945	SYNJ2	94	69.199	Anolis_carolinensis
MGP_PahariEiJ_G0023344	Synj2	100	92.890	ENSANAG00000026575	SYNJ2	98	88.245	Aotus_nancymaae
MGP_PahariEiJ_G0023344	Synj2	100	89.561	ENSBTAG00000000817	SYNJ2	99	80.444	Bos_taurus
MGP_PahariEiJ_G0023344	Synj2	100	92.587	ENSCJAG00000003570	SYNJ2	98	88.483	Callithrix_jacchus
MGP_PahariEiJ_G0023344	Synj2	100	91.970	ENSCAFG00000000644	SYNJ2	99	83.115	Canis_familiaris
MGP_PahariEiJ_G0023344	Synj2	100	91.970	ENSCAFG00020015809	SYNJ2	95	89.507	Canis_lupus_dingo
MGP_PahariEiJ_G0023344	Synj2	100	88.788	ENSCHIG00000011077	SYNJ2	99	80.208	Capra_hircus
MGP_PahariEiJ_G0023344	Synj2	100	92.576	ENSTSYG00000014342	SYNJ2	94	89.062	Carlito_syrichta
MGP_PahariEiJ_G0023344	Synj2	100	89.637	ENSCAPG00000000287	SYNJ2	100	89.637	Cavia_aperea
MGP_PahariEiJ_G0023344	Synj2	100	93.333	ENSCPOG00000009144	SYNJ2	100	89.637	Cavia_porcellus
MGP_PahariEiJ_G0023344	Synj2	100	92.587	ENSCCAG00000025484	SYNJ2	98	88.245	Cebus_capucinus
MGP_PahariEiJ_G0023344	Synj2	100	93.030	ENSCATG00000042943	SYNJ2	98	88.651	Cercocebus_atys
MGP_PahariEiJ_G0023344	Synj2	100	93.636	ENSCLAG00000004730	SYNJ2	96	89.189	Chinchilla_lanigera
MGP_PahariEiJ_G0023344	Synj2	100	92.879	ENSCSAG00000013130	SYNJ2	99	84.492	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023344	Synj2	56	94.595	ENSCHOG00000000343	-	52	94.595	Choloepus_hoffmanni
MGP_PahariEiJ_G0023344	Synj2	100	85.023	ENSCPBG00000016273	SYNJ2	98	70.927	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023344	Synj2	100	92.879	ENSCANG00000040349	SYNJ2	98	88.789	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023344	Synj2	100	96.970	ENSCGRG00001004257	Synj2	99	94.328	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023344	Synj2	100	96.970	ENSCGRG00000001656	Synj2	100	93.490	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023344	Synj2	99	85.129	ENSDNOG00000015900	SYNJ2	98	81.231	Dasypus_novemcinctus
MGP_PahariEiJ_G0023344	Synj2	100	92.879	ENSDORG00000014128	Synj2	98	82.246	Dipodomys_ordii
MGP_PahariEiJ_G0023344	Synj2	87	90.141	ENSETEG00000017418	SYNJ2	81	90.580	Echinops_telfairi
MGP_PahariEiJ_G0023344	Synj2	100	92.727	ENSEASG00005018902	SYNJ2	99	83.576	Equus_asinus_asinus
MGP_PahariEiJ_G0023344	Synj2	100	92.576	ENSECAG00000012646	SYNJ2	93	83.535	Equus_caballus
MGP_PahariEiJ_G0023344	Synj2	63	78.571	ENSEEUG00000015796	-	57	78.571	Erinaceus_europaeus
MGP_PahariEiJ_G0023344	Synj2	100	91.364	ENSFCAG00000010854	SYNJ2	98	87.460	Felis_catus
MGP_PahariEiJ_G0023344	Synj2	100	81.997	ENSFALG00000012593	SYNJ2	98	67.865	Ficedula_albicollis
MGP_PahariEiJ_G0023344	Synj2	100	92.121	ENSFDAG00000016352	SYNJ2	100	88.601	Fukomys_damarensis
MGP_PahariEiJ_G0023344	Synj2	99	84.394	ENSGALG00000013727	SYNJ2	90	74.170	Gallus_gallus
MGP_PahariEiJ_G0023344	Synj2	100	84.569	ENSGAGG00000009857	SYNJ2	98	70.304	Gopherus_agassizii
MGP_PahariEiJ_G0023344	Synj2	100	93.030	ENSGGOG00000012210	SYNJ2	98	88.413	Gorilla_gorilla
MGP_PahariEiJ_G0023344	Synj2	100	93.182	ENSHGLG00000007534	SYNJ2	95	91.909	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023344	Synj2	100	93.182	ENSHGLG00100009973	SYNJ2	100	88.860	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023344	Synj2	100	94.697	ENSSTOG00000016474	SYNJ2	99	85.332	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023344	Synj2	100	95.000	ENSJJAG00000014436	Synj2	93	92.342	Jaculus_jaculus
MGP_PahariEiJ_G0023344	Synj2	100	74.548	ENSLACG00000007316	SYNJ2	99	68.515	Latimeria_chalumnae
MGP_PahariEiJ_G0023344	Synj2	100	89.107	ENSLAFG00000011979	SYNJ2	99	80.258	Loxodonta_africana
MGP_PahariEiJ_G0023344	Synj2	93	90.694	ENSMFAG00000040552	SYNJ2	99	90.000	Macaca_fascicularis
MGP_PahariEiJ_G0023344	Synj2	100	93.182	ENSMMUG00000007153	SYNJ2	98	88.574	Macaca_mulatta
MGP_PahariEiJ_G0023344	Synj2	100	93.333	ENSMNEG00000017211	SYNJ2	98	88.449	Macaca_nemestrina
MGP_PahariEiJ_G0023344	Synj2	100	86.736	ENSMLEG00000024911	SYNJ2	99	81.083	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023344	Synj2	99	82.153	ENSMGAG00000012839	SYNJ2	98	73.284	Meleagris_gallopavo
MGP_PahariEiJ_G0023344	Synj2	100	96.970	ENSMAUG00000022212	Synj2	100	93.229	Mesocricetus_auratus
MGP_PahariEiJ_G0023344	Synj2	100	91.061	ENSMICG00000015804	SYNJ2	97	87.009	Microcebus_murinus
MGP_PahariEiJ_G0023344	Synj2	100	96.364	ENSMOCG00000020054	Synj2	99	94.243	Microtus_ochrogaster
MGP_PahariEiJ_G0023344	Synj2	100	90.758	ENSMODG00000007783	SYNJ2	99	78.452	Monodelphis_domestica
MGP_PahariEiJ_G0023344	Synj2	100	98.485	MGP_CAROLIEiJ_G0021026	Synj2	100	98.485	Mus_caroli
MGP_PahariEiJ_G0023344	Synj2	100	99.091	ENSMUSG00000023805	Synj2	100	99.091	Mus_musculus
MGP_PahariEiJ_G0023344	Synj2	100	98.485	MGP_SPRETEiJ_G0021931	Synj2	100	98.485	Mus_spretus
MGP_PahariEiJ_G0023344	Synj2	100	87.727	ENSMPUG00000005323	SYNJ2	98	83.985	Mustela_putorius_furo
MGP_PahariEiJ_G0023344	Synj2	100	91.364	ENSMLUG00000000324	SYNJ2	99	80.794	Myotis_lucifugus
MGP_PahariEiJ_G0023344	Synj2	100	95.455	ENSNGAG00000014859	Synj2	98	93.383	Nannospalax_galili
MGP_PahariEiJ_G0023344	Synj2	100	90.361	ENSNLEG00000010750	SYNJ2	97	85.680	Nomascus_leucogenys
MGP_PahariEiJ_G0023344	Synj2	93	85.847	ENSMEUG00000003493	SYNJ2	94	82.143	Notamacropus_eugenii
MGP_PahariEiJ_G0023344	Synj2	93	87.642	ENSOPRG00000009648	SYNJ2	93	79.415	Ochotona_princeps
MGP_PahariEiJ_G0023344	Synj2	100	93.333	ENSODEG00000007709	SYNJ2	100	88.860	Octodon_degus
MGP_PahariEiJ_G0023344	Synj2	90	64.500	ENSOANG00000029828	-	99	59.398	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0023344	Synj2	100	90.303	ENSOCUG00000004762	SYNJ2	99	80.949	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023344	Synj2	100	92.447	ENSOGAG00000000488	SYNJ2	100	88.505	Otolemur_garnettii
MGP_PahariEiJ_G0023344	Synj2	100	89.107	ENSOARG00000004304	SYNJ2	99	80.483	Ovis_aries
MGP_PahariEiJ_G0023344	Synj2	100	93.182	ENSPPAG00000028831	SYNJ2	99	83.333	Pan_paniscus
MGP_PahariEiJ_G0023344	Synj2	100	91.515	ENSPPRG00000009068	SYNJ2	98	87.540	Panthera_pardus
MGP_PahariEiJ_G0023344	Synj2	100	91.061	ENSPTIG00000018780	SYNJ2	94	87.262	Panthera_tigris_altaica
MGP_PahariEiJ_G0023344	Synj2	100	93.182	ENSPTRG00000018739	SYNJ2	99	89.040	Pan_troglodytes
MGP_PahariEiJ_G0023344	Synj2	100	93.182	ENSPANG00000010755	SYNJ2	98	88.730	Papio_anubis
MGP_PahariEiJ_G0023344	Synj2	100	84.418	ENSPSIG00000014659	SYNJ2	98	70.151	Pelodiscus_sinensis
MGP_PahariEiJ_G0023344	Synj2	100	97.121	ENSPEMG00000006247	Synj2	100	93.247	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023344	Synj2	100	89.848	ENSPCIG00000010179	SYNJ2	99	78.177	Phascolarctos_cinereus
MGP_PahariEiJ_G0023344	Synj2	100	93.333	ENSPPYG00000017130	SYNJ2	99	83.880	Pongo_abelii
MGP_PahariEiJ_G0023344	Synj2	94	89.189	ENSPCAG00000009217	SYNJ2	90	91.935	Procavia_capensis
MGP_PahariEiJ_G0023344	Synj2	100	92.424	ENSPCOG00000026910	SYNJ2	97	89.014	Propithecus_coquereli
MGP_PahariEiJ_G0023344	Synj2	96	89.764	ENSPVAG00000006131	SYNJ2	99	78.240	Pteropus_vampyrus
MGP_PahariEiJ_G0023344	Synj2	100	95.052	ENSRNOG00000017114	Synj2	100	92.852	Rattus_norvegicus
MGP_PahariEiJ_G0023344	Synj2	100	92.436	ENSRBIG00000044126	SYNJ2	99	83.074	Rhinopithecus_bieti
MGP_PahariEiJ_G0023344	Synj2	100	92.879	ENSRROG00000027755	SYNJ2	98	88.571	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023344	Synj2	100	92.587	ENSSBOG00000034876	SYNJ2	98	88.403	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023344	Synj2	100	90.455	ENSSHAG00000018881	SYNJ2	99	78.035	Sarcophilus_harrisii
MGP_PahariEiJ_G0023344	Synj2	100	83.485	ENSSPUG00000000491	SYNJ2	95	72.018	Sphenodon_punctatus
MGP_PahariEiJ_G0023344	Synj2	100	91.061	ENSSSCG00000012315	SYNJ2	98	87.620	Sus_scrofa
MGP_PahariEiJ_G0023344	Synj2	100	80.945	ENSTGUG00000011082	SYNJ2	100	72.862	Taeniopygia_guttata
MGP_PahariEiJ_G0023344	Synj2	90	73.134	ENSTBEG00000015827	SYNJ2	84	77.477	Tupaia_belangeri
MGP_PahariEiJ_G0023344	Synj2	94	89.394	ENSTTRG00000009677	SYNJ2	99	77.471	Tursiops_truncatus
MGP_PahariEiJ_G0023344	Synj2	88	85.084	ENSUAMG00000026577	-	89	85.084	Ursus_americanus
MGP_PahariEiJ_G0023344	Synj2	90	75.573	ENSUAMG00000021958	-	97	74.711	Ursus_americanus
MGP_PahariEiJ_G0023344	Synj2	100	86.970	ENSUMAG00000012826	SYNJ2	97	85.908	Ursus_maritimus
MGP_PahariEiJ_G0023344	Synj2	100	88.467	ENSVVUG00000007407	SYNJ2	99	88.500	Vulpes_vulpes
MGP_PahariEiJ_G0023344	Synj2	100	75.378	ENSXETG00000034066	synj2	80	69.024	Xenopus_tropicalis