EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023361 (Gene tree)
Gene ID: 110338358
Gene Symbol: Pnldc1
Alias: LOC240023
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 20166 bases
Position: chr21:3988102-4008267
Accession: 110338358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0054949	CAF1	PF04857.20	1.8e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0054949	-	1689	XM_021221695	MGP_PahariEiJ_P0054949	531 (aa)	XP_021077354	UPI000A30C707
MGP_PahariEiJ_T0054950	-	1599	-	MGP_PahariEiJ_P0054950	532 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0023361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023361	Pnldc1	99	86.200	ENSG00000146453	PNLDC1	99	86.200	Homo_sapiens
MGP_PahariEiJ_G0023361	Pnldc1	99	86.364	ENSAMEG00000015371	PNLDC1	99	86.364	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023361	Pnldc1	96	59.144	ENSAPLG00000007014	PNLDC1	98	59.144	Anas_platyrhynchos
MGP_PahariEiJ_G0023361	Pnldc1	99	59.811	ENSACAG00000013667	PNLDC1	99	59.811	Anolis_carolinensis
MGP_PahariEiJ_G0023361	Pnldc1	100	85.499	ENSANAG00000034713	PNLDC1	100	86.106	Aotus_nancymaae
MGP_PahariEiJ_G0023361	Pnldc1	95	87.103	ENSBTAG00000015166	PNLDC1	95	87.103	Bos_taurus
MGP_PahariEiJ_G0023361	Pnldc1	100	84.369	ENSCJAG00000011865	PNLDC1	100	84.369	Callithrix_jacchus
MGP_PahariEiJ_G0023361	Pnldc1	100	87.782	ENSCAFG00000000740	PNLDC1	100	87.782	Canis_familiaris
MGP_PahariEiJ_G0023361	Pnldc1	100	85.366	ENSCAFG00020017742	PNLDC1	100	85.366	Canis_lupus_dingo
MGP_PahariEiJ_G0023361	Pnldc1	100	84.774	ENSCHIG00000003141	PNLDC1	100	84.774	Capra_hircus
MGP_PahariEiJ_G0023361	Pnldc1	100	84.023	ENSTSYG00000005606	PNLDC1	100	84.023	Carlito_syrichta
MGP_PahariEiJ_G0023361	Pnldc1	100	62.406	ENSCAPG00000011893	PNLDC1	100	62.406	Cavia_aperea
MGP_PahariEiJ_G0023361	Pnldc1	100	79.699	ENSCPOG00000019565	PNLDC1	100	79.699	Cavia_porcellus
MGP_PahariEiJ_G0023361	Pnldc1	100	85.687	ENSCCAG00000026232	PNLDC1	100	85.687	Cebus_capucinus
MGP_PahariEiJ_G0023361	Pnldc1	100	86.064	ENSCATG00000033196	PNLDC1	100	86.064	Cercocebus_atys
MGP_PahariEiJ_G0023361	Pnldc1	99	85.444	ENSCLAG00000003228	PNLDC1	99	85.444	Chinchilla_lanigera
MGP_PahariEiJ_G0023361	Pnldc1	95	85.069	ENSCSAG00000012478	PNLDC1	98	85.069	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023361	Pnldc1	96	65.625	ENSCPBG00000004050	PNLDC1	100	65.625	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023361	Pnldc1	95	86.166	ENSCANG00000043076	PNLDC1	97	86.166	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023361	Pnldc1	100	69.868	ENSCGRG00001011981	-	99	69.868	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023361	Pnldc1	100	87.006	ENSCGRG00001007470	-	99	87.006	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023361	Pnldc1	100	87.006	ENSCGRG00000010221	-	99	87.006	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023361	Pnldc1	100	71.940	ENSCGRG00000003103	-	99	71.940	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023361	Pnldc1	100	85.553	ENSDNOG00000013709	PNLDC1	100	85.553	Dasypus_novemcinctus
MGP_PahariEiJ_G0023361	Pnldc1	100	81.121	ENSDORG00000011517	Pnldc1	99	88.498	Dipodomys_ordii
MGP_PahariEiJ_G0023361	Pnldc1	93	76.518	ENSETEG00000007587	PNLDC1	99	76.518	Echinops_telfairi
MGP_PahariEiJ_G0023361	Pnldc1	97	30.624	ENSEBUG00000008118	PNLDC1	97	30.624	Eptatretus_burgeri
MGP_PahariEiJ_G0023361	Pnldc1	100	78.704	ENSEASG00005019029	PNLDC1	100	78.704	Equus_asinus_asinus
MGP_PahariEiJ_G0023361	Pnldc1	100	86.654	ENSECAG00000012898	PNLDC1	100	86.654	Equus_caballus
MGP_PahariEiJ_G0023361	Pnldc1	67	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
MGP_PahariEiJ_G0023361	Pnldc1	100	87.571	ENSFCAG00000002848	PNLDC1	100	87.571	Felis_catus
MGP_PahariEiJ_G0023361	Pnldc1	95	57.480	ENSFALG00000012081	PNLDC1	99	57.480	Ficedula_albicollis
MGP_PahariEiJ_G0023361	Pnldc1	100	86.252	ENSFDAG00000021334	PNLDC1	100	86.252	Fukomys_damarensis
MGP_PahariEiJ_G0023361	Pnldc1	79	59.382	ENSGALG00000011624	PNLDC1	82	59.382	Gallus_gallus
MGP_PahariEiJ_G0023361	Pnldc1	99	66.226	ENSGAGG00000015276	PNLDC1	100	67.562	Gopherus_agassizii
MGP_PahariEiJ_G0023361	Pnldc1	100	85.876	ENSGGOG00000014077	PNLDC1	100	85.876	Gorilla_gorilla
MGP_PahariEiJ_G0023361	Pnldc1	100	86.441	ENSHGLG00000006889	PNLDC1	100	86.441	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023361	Pnldc1	100	86.441	ENSHGLG00100018275	PNLDC1	100	86.441	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023361	Pnldc1	99	89.454	ENSSTOG00000005595	PNLDC1	99	89.454	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023361	Pnldc1	99	84.250	ENSJJAG00000009937	Pnldc1	99	84.250	Jaculus_jaculus
MGP_PahariEiJ_G0023361	Pnldc1	59	86.032	ENSLAFG00000030189	PNLDC1	92	86.032	Loxodonta_africana
MGP_PahariEiJ_G0023361	Pnldc1	100	86.064	ENSMFAG00000041296	PNLDC1	100	86.064	Macaca_fascicularis
MGP_PahariEiJ_G0023361	Pnldc1	100	86.064	ENSMMUG00000004181	PNLDC1	100	86.064	Macaca_mulatta
MGP_PahariEiJ_G0023361	Pnldc1	100	85.876	ENSMNEG00000034271	PNLDC1	100	85.876	Macaca_nemestrina
MGP_PahariEiJ_G0023361	Pnldc1	100	82.863	ENSMLEG00000044059	PNLDC1	100	82.863	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023361	Pnldc1	95	58.661	ENSMGAG00000012470	PNLDC1	97	58.661	Meleagris_gallopavo
MGP_PahariEiJ_G0023361	Pnldc1	99	69.492	ENSMAUG00000012298	Pnldc1	100	69.492	Mesocricetus_auratus
MGP_PahariEiJ_G0023361	Pnldc1	100	86.252	ENSMICG00000008021	PNLDC1	100	86.252	Microcebus_murinus
MGP_PahariEiJ_G0023361	Pnldc1	100	93.809	ENSMOCG00000014287	Pnldc1	100	93.809	Microtus_ochrogaster
MGP_PahariEiJ_G0023361	Pnldc1	99	75.425	ENSMODG00000007420	PNLDC1	99	75.425	Monodelphis_domestica
MGP_PahariEiJ_G0023361	Pnldc1	100	96.987	MGP_CAROLIEiJ_G0021045	Pnldc1	100	96.987	Mus_caroli
MGP_PahariEiJ_G0023361	Pnldc1	100	96.610	ENSMUSG00000073460	Pnldc1	100	97.701	Mus_musculus
MGP_PahariEiJ_G0023361	Pnldc1	100	96.422	MGP_SPRETEiJ_G0021975	Pnldc1	100	96.422	Mus_spretus
MGP_PahariEiJ_G0023361	Pnldc1	99	87.689	ENSMPUG00000004920	PNLDC1	99	87.689	Mustela_putorius_furo
MGP_PahariEiJ_G0023361	Pnldc1	100	85.876	ENSMLUG00000000747	PNLDC1	100	85.876	Myotis_lucifugus
MGP_PahariEiJ_G0023361	Pnldc1	100	94.162	ENSNGAG00000017714	Pnldc1	99	94.162	Nannospalax_galili
MGP_PahariEiJ_G0023361	Pnldc1	97	84.109	ENSNLEG00000011282	PNLDC1	99	84.109	Nomascus_leucogenys
MGP_PahariEiJ_G0023361	Pnldc1	60	62.813	ENSMEUG00000011926	-	64	62.813	Notamacropus_eugenii
MGP_PahariEiJ_G0023361	Pnldc1	54	65.625	ENSMEUG00000014042	-	100	65.625	Notamacropus_eugenii
MGP_PahariEiJ_G0023361	Pnldc1	79	84.091	ENSOPRG00000003813	PNLDC1	79	84.091	Ochotona_princeps
MGP_PahariEiJ_G0023361	Pnldc1	100	86.629	ENSODEG00000008047	PNLDC1	100	86.629	Octodon_degus
MGP_PahariEiJ_G0023361	Pnldc1	99	58.113	ENSOANG00000012199	PNLDC1	99	60.377	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0023361	Pnldc1	100	86.842	ENSOCUG00000013867	PNLDC1	100	86.842	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023361	Pnldc1	99	87.335	ENSOGAG00000007331	PNLDC1	100	87.335	Otolemur_garnettii
MGP_PahariEiJ_G0023361	Pnldc1	100	84.746	ENSOARG00000004585	PNLDC1	100	84.746	Ovis_aries
MGP_PahariEiJ_G0023361	Pnldc1	100	85.687	ENSPPAG00000026651	PNLDC1	100	85.687	Pan_paniscus
MGP_PahariEiJ_G0023361	Pnldc1	100	87.571	ENSPPRG00000012854	PNLDC1	100	87.571	Panthera_pardus
MGP_PahariEiJ_G0023361	Pnldc1	99	82.576	ENSPTIG00000011501	PNLDC1	99	82.576	Panthera_tigris_altaica
MGP_PahariEiJ_G0023361	Pnldc1	100	85.687	ENSPTRG00000018762	PNLDC1	100	85.687	Pan_troglodytes
MGP_PahariEiJ_G0023361	Pnldc1	100	86.252	ENSPANG00000022009	PNLDC1	100	86.252	Papio_anubis
MGP_PahariEiJ_G0023361	Pnldc1	100	95.292	ENSPEMG00000016301	Pnldc1	99	95.292	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023361	Pnldc1	83	77.221	ENSPCIG00000023412	PNLDC1	100	77.221	Phascolarctos_cinereus
MGP_PahariEiJ_G0023361	Pnldc1	100	80.827	ENSPPYG00000017148	PNLDC1	100	80.827	Pongo_abelii
MGP_PahariEiJ_G0023361	Pnldc1	99	77.841	ENSPCAG00000014169	PNLDC1	99	77.841	Procavia_capensis
MGP_PahariEiJ_G0023361	Pnldc1	100	87.006	ENSPCOG00000025722	PNLDC1	100	87.006	Propithecus_coquereli
MGP_PahariEiJ_G0023361	Pnldc1	73	90.649	ENSPVAG00000005325	PNLDC1	73	90.649	Pteropus_vampyrus
MGP_PahariEiJ_G0023361	Pnldc1	100	96.798	ENSRNOG00000023140	Pnldc1	100	98.125	Rattus_norvegicus
MGP_PahariEiJ_G0023361	Pnldc1	100	85.876	ENSRBIG00000033806	PNLDC1	100	85.876	Rhinopithecus_bieti
MGP_PahariEiJ_G0023361	Pnldc1	95	86.364	ENSRROG00000043919	PNLDC1	97	86.364	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023361	Pnldc1	100	85.687	ENSSBOG00000019135	PNLDC1	100	85.687	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023361	Pnldc1	96	76.621	ENSSHAG00000015192	PNLDC1	98	76.621	Sarcophilus_harrisii
MGP_PahariEiJ_G0023361	Pnldc1	54	66.084	ENSSPUG00000004627	PNLDC1	99	65.179	Sphenodon_punctatus
MGP_PahariEiJ_G0023361	Pnldc1	96	84.706	ENSSSCG00000004046	PNLDC1	99	84.706	Sus_scrofa
MGP_PahariEiJ_G0023361	Pnldc1	92	58.776	ENSTGUG00000011418	PNLDC1	99	58.776	Taeniopygia_guttata
MGP_PahariEiJ_G0023361	Pnldc1	96	75.490	ENSTBEG00000009131	PNLDC1	98	75.490	Tupaia_belangeri
MGP_PahariEiJ_G0023361	Pnldc1	73	82.383	ENSTTRG00000010409	PNLDC1	73	82.383	Tursiops_truncatus
MGP_PahariEiJ_G0023361	Pnldc1	99	73.567	ENSUAMG00000015783	PNLDC1	99	73.567	Ursus_americanus
MGP_PahariEiJ_G0023361	Pnldc1	95	79.061	ENSUMAG00000011903	PNLDC1	99	79.061	Ursus_maritimus
MGP_PahariEiJ_G0023361	Pnldc1	96	88.672	ENSVVUG00000006586	PNLDC1	99	87.295	Vulpes_vulpes