EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023478 (Gene tree)
Gene ID: -
Gene Symbol: Srrm2
Alias: 5033413A03Rik|SRm300
Full Name: serine/arginine repetitive matrix 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 34290 bases
Position: chr21:18768367-18802656
Accession: 1923206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0055259	cwf21	PF08312.12	3.3e-11	1	1
MGP_PahariEiJ_P0055260	cwf21	PF08312.12	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0055263	-	426	-	-	- (aa)	-	-
MGP_PahariEiJ_T0055262	-	459	-	MGP_PahariEiJ_P0055262	88 (aa)	-	-
MGP_PahariEiJ_T0055261	-	8681	-	MGP_PahariEiJ_P0055261	2609 (aa)	-	-
MGP_PahariEiJ_T0055260	-	8978	-	MGP_PahariEiJ_P0055260	2705 (aa)	-	-
MGP_PahariEiJ_T0055267	-	647	-	MGP_PahariEiJ_P0055267	104 (aa)	-	-
MGP_PahariEiJ_T0055266	-	2987	-	-	- (aa)	-	-
MGP_PahariEiJ_T0055265	-	2067	-	-	- (aa)	-	-
MGP_PahariEiJ_T0055264	-	493	-	MGP_PahariEiJ_P0055264	33 (aa)	-	-
MGP_PahariEiJ_T0055268	-	601	-	-	- (aa)	-	-
MGP_PahariEiJ_T0055259	-	950	-	MGP_PahariEiJ_P0055259	171 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0023478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0023478	Srrm2	71	50.806	MGP_PahariEiJ_G0024425	Srrm3	89	51.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSG00000167978	SRRM2	100	99.130	Homo_sapiens
MGP_PahariEiJ_G0023478	Srrm2	88	59.477	ENSACIG00000023341	-	92	54.971	Amphilophus_citrinellus
MGP_PahariEiJ_G0023478	Srrm2	89	58.710	ENSAMXG00000038994	-	90	51.832	Astyanax_mexicanus
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSBTAG00000012683	SRRM2	73	71.305	Bos_taurus
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSCAFG00000019346	SRRM2	68	76.651	Canis_familiaris
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSCAFG00020025919	SRRM2	68	76.651	Canis_lupus_dingo
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSCHIG00000011257	SRRM2	68	78.568	Capra_hircus
MGP_PahariEiJ_G0023478	Srrm2	100	98.830	ENSTSYG00000032523	SRRM2	69	77.963	Carlito_syrichta
MGP_PahariEiJ_G0023478	Srrm2	91	78.344	ENSCPBG00000005984	-	95	76.891	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023478	Srrm2	88	59.740	ENSCSEG00000009971	-	92	52.332	Cynoglossus_semilaevis
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSDNOG00000048469	SRRM2	68	78.967	Dasypus_novemcinctus
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSETEG00000019959	SRRM2	62	89.954	Echinops_telfairi
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSEASG00005006019	SRRM2	94	91.331	Equus_asinus_asinus
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSECAG00000011612	SRRM2	67	73.364	Equus_caballus
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSFCAG00000004709	SRRM2	67	76.903	Felis_catus
MGP_PahariEiJ_G0023478	Srrm2	91	70.807	ENSGALG00000047953	-	68	68.571	Gallus_gallus
MGP_PahariEiJ_G0023478	Srrm2	72	43.200	ENSGACG00000020232	-	66	37.430	Gasterosteus_aculeatus
MGP_PahariEiJ_G0023478	Srrm2	56	55.208	ENSHGLG00100004269	-	59	68.182	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSSTOG00000025810	SRRM2	67	76.956	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023478	Srrm2	88	59.355	ENSLBEG00000007729	-	90	56.213	Labrus_bergylta
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSLAFG00000000624	SRRM2	69	71.040	Loxodonta_africana
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSMMUG00000018858	SRRM2	68	80.647	Macaca_mulatta
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSMOCG00000022507	Srrm2	67	83.306	Microtus_ochrogaster
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSMODG00000016533	SRRM2	95	80.081	Monodelphis_domestica
MGP_PahariEiJ_G0023478	Srrm2	100	98.830	MGP_CAROLIEiJ_G0021161	Srrm2	100	98.830	Mus_caroli
MGP_PahariEiJ_G0023478	Srrm2	100	98.830	ENSMUSG00000039218	Srrm2	100	98.953	Mus_musculus
MGP_PahariEiJ_G0023478	Srrm2	100	98.830	MGP_SPRETEiJ_G0022071	Srrm2	100	98.830	Mus_spretus
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSMPUG00000015264	SRRM2	68	76.040	Mustela_putorius_furo
MGP_PahariEiJ_G0023478	Srrm2	100	98.830	ENSNGAG00000021633	Srrm2	68	84.914	Nannospalax_galili
MGP_PahariEiJ_G0023478	Srrm2	57	54.639	ENSNGAG00000005825	-	72	54.639	Nannospalax_galili
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSNLEG00000009466	SRRM2	93	87.278	Nomascus_leucogenys
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSODEG00000013605	SRRM2	66	74.414	Octodon_degus
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSOGAG00000032989	SRRM2	69	77.714	Otolemur_garnettii
MGP_PahariEiJ_G0023478	Srrm2	88	62.338	ENSPMGG00000000733	-	92	54.404	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSPEMG00000011170	Srrm2	68	85.995	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023478	Srrm2	100	88.304	ENSPCAG00000009687	-	75	76.241	Procavia_capensis
MGP_PahariEiJ_G0023478	Srrm2	76	49.231	ENSPNYG00000009463	-	88	41.860	Pundamilia_nyererei
MGP_PahariEiJ_G0023478	Srrm2	89	58.710	ENSPNAG00000018911	-	90	52.062	Pygocentrus_nattereri
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSRBIG00000033934	SRRM2	67	80.753	Rhinopithecus_bieti
MGP_PahariEiJ_G0023478	Srrm2	100	97.076	ENSSHAG00000017712	SRRM2	95	79.675	Sarcophilus_harrisii
MGP_PahariEiJ_G0023478	Srrm2	88	58.710	ENSSLDG00000003595	-	79	52.577	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0023478	Srrm2	68	73.504	ENSSPUG00000003428	-	100	73.504	Sphenodon_punctatus
MGP_PahariEiJ_G0023478	Srrm2	72	90.909	ENSTBEG00000006307	-	62	98.990	Tupaia_belangeri
MGP_PahariEiJ_G0023478	Srrm2	100	97.661	ENSTTRG00000015432	SRRM2	58	97.661	Tursiops_truncatus
MGP_PahariEiJ_G0023478	Srrm2	100	98.246	ENSVVUG00000008770	SRRM2	92	76.428	Vulpes_vulpes
MGP_PahariEiJ_G0023478	Srrm2	88	60.131	ENSXCOG00000000148	-	92	52.308	Xiphophorus_couchianus