EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023498 (Gene tree)
Gene ID: 110337927
Gene Symbol: Rnps1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 11196 bases
Position: chr21:19363674-19374869
Accession: 110337927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0055348	RRM_1	PF00076.22	1e-17	1	1
MGP_PahariEiJ_P0055349	RRM_1	PF00076.22	1.1e-17	1	1
MGP_PahariEiJ_P0055350	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0055348	-	1604	XM_021221049	MGP_PahariEiJ_P0055348	282 (aa)	XP_021076708	UPI000007322C
MGP_PahariEiJ_T0055349	-	1782	XM_021221047	MGP_PahariEiJ_P0055349	304 (aa)	XP_021076706	UPI000A307DD1
MGP_PahariEiJ_T0055350	-	1904	XM_021221048	MGP_PahariEiJ_P0055350	304 (aa)	XP_021076707	UPI000A307DD1

Gene Model

Click here to download MGP_PahariEiJ_G0023498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSG00000205937	RNPS1	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0023498	Rnps1	79	69.038	ENSAPOG00000014649	-	85	70.124	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSAMEG00000017861	RNPS1	100	99.344	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023498	Rnps1	76	67.907	ENSACIG00000014367	-	76	66.512	Amphilophus_citrinellus
MGP_PahariEiJ_G0023498	Rnps1	85	70.417	ENSAOCG00000002404	RNPS1	84	70.417	Amphiprion_ocellaris
MGP_PahariEiJ_G0023498	Rnps1	85	70.293	ENSAPEG00000006497	RNPS1	81	70.293	Amphiprion_percula
MGP_PahariEiJ_G0023498	Rnps1	85	72.083	ENSATEG00000024267	RNPS1	84	72.614	Anabas_testudineus
MGP_PahariEiJ_G0023498	Rnps1	86	65.399	ENSAPLG00000006231	RNPS1	65	93.548	Anas_platyrhynchos
MGP_PahariEiJ_G0023498	Rnps1	76	90.129	ENSACAG00000004088	RNPS1	94	90.129	Anolis_carolinensis
MGP_PahariEiJ_G0023498	Rnps1	77	96.789	ENSANAG00000029802	-	90	92.857	Aotus_nancymaae
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSANAG00000028802	RNPS1	100	99.645	Aotus_nancymaae
MGP_PahariEiJ_G0023498	Rnps1	85	64.583	ENSACLG00000021537	-	92	69.685	Astatotilapia_calliptera
MGP_PahariEiJ_G0023498	Rnps1	85	75.417	ENSAMXG00000006330	-	84	68.750	Astyanax_mexicanus
MGP_PahariEiJ_G0023498	Rnps1	100	99.291	ENSBTAG00000009969	RNPS1	100	99.291	Bos_taurus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSCJAG00000014969	RNPS1	100	100.000	Callithrix_jacchus
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSCAFG00000019397	RNPS1	100	99.344	Canis_familiaris
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSCAFG00020026159	RNPS1	100	99.344	Canis_lupus_dingo
MGP_PahariEiJ_G0023498	Rnps1	72	99.510	ENSCHIG00000014621	-	69	99.024	Capra_hircus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSTSYG00000001629	RNPS1	100	100.000	Carlito_syrichta
MGP_PahariEiJ_G0023498	Rnps1	79	95.041	ENSTSYG00000031848	-	98	95.000	Carlito_syrichta
MGP_PahariEiJ_G0023498	Rnps1	100	99.016	ENSCAPG00000007731	RNPS1	100	99.016	Cavia_aperea
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSCPOG00000002066	RNPS1	100	99.645	Cavia_porcellus
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSCCAG00000034480	RNPS1	100	99.645	Cebus_capucinus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSCATG00000013756	RNPS1	100	100.000	Cercocebus_atys
MGP_PahariEiJ_G0023498	Rnps1	95	89.925	ENSCATG00000042361	-	87	93.511	Cercocebus_atys
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSCLAG00000015546	RNPS1	100	99.645	Chinchilla_lanigera
MGP_PahariEiJ_G0023498	Rnps1	100	97.163	ENSCSAG00000005219	-	95	97.163	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023498	Rnps1	100	97.705	ENSCHOG00000004866	RNPS1	100	97.705	Choloepus_hoffmanni
MGP_PahariEiJ_G0023498	Rnps1	79	62.917	ENSCPBG00000000214	RNPS1	73	63.889	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023498	Rnps1	72	85.577	ENSCANG00000030189	-	79	70.192	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSCANG00000041307	RNPS1	100	100.000	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSCGRG00001020431	Rnps1	100	100.000	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023498	Rnps1	100	99.291	ENSCGRG00000014021	Rnps1	80	99.174	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023498	Rnps1	85	69.874	ENSCSEG00000015997	RNPS1	82	69.874	Cynoglossus_semilaevis
MGP_PahariEiJ_G0023498	Rnps1	85	71.250	ENSCSEG00000000402	RNPS1	84	68.199	Cynoglossus_semilaevis
MGP_PahariEiJ_G0023498	Rnps1	77	70.968	ENSCVAG00000010868	RNPS1	75	64.815	Cyprinodon_variegatus
MGP_PahariEiJ_G0023498	Rnps1	85	63.750	ENSDARG00000100188	RNPS1	84	69.710	Danio_rerio
MGP_PahariEiJ_G0023498	Rnps1	85	63.750	ENSDARG00000116743	rnps1	84	69.710	Danio_rerio
MGP_PahariEiJ_G0023498	Rnps1	70	73.469	ENSDNOG00000038751	-	99	72.727	Dasypus_novemcinctus
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSDNOG00000016081	RNPS1	100	99.344	Dasypus_novemcinctus
MGP_PahariEiJ_G0023498	Rnps1	100	99.291	ENSDORG00000001755	Rnps1	100	99.291	Dipodomys_ordii
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSEASG00005004862	RNPS1	100	99.344	Equus_asinus_asinus
MGP_PahariEiJ_G0023498	Rnps1	81	92.742	ENSECAG00000023288	RNPS1	83	97.403	Equus_caballus
MGP_PahariEiJ_G0023498	Rnps1	100	80.328	ENSEEUG00000005933	RNPS1	100	80.328	Erinaceus_europaeus
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSFCAG00000007690	RNPS1	100	99.645	Felis_catus
MGP_PahariEiJ_G0023498	Rnps1	85	95.397	ENSFALG00000004868	RNPS1	85	95.417	Ficedula_albicollis
MGP_PahariEiJ_G0023498	Rnps1	100	99.291	ENSFDAG00000003386	RNPS1	100	99.291	Fukomys_damarensis
MGP_PahariEiJ_G0023498	Rnps1	77	70.833	ENSFHEG00000011705	RNPS1	75	71.429	Fundulus_heteroclitus
MGP_PahariEiJ_G0023498	Rnps1	85	95.417	ENSGALG00000009288	RNPS1	85	95.417	Gallus_gallus
MGP_PahariEiJ_G0023498	Rnps1	85	68.465	ENSGACG00000005641	-	84	68.465	Gasterosteus_aculeatus
MGP_PahariEiJ_G0023498	Rnps1	85	94.142	ENSGAGG00000010452	RNPS1	86	92.395	Gopherus_agassizii
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSGGOG00000014275	RNPS1	100	100.000	Gorilla_gorilla
MGP_PahariEiJ_G0023498	Rnps1	73	98.068	ENSGGOG00000026421	-	79	98.068	Gorilla_gorilla
MGP_PahariEiJ_G0023498	Rnps1	79	64.730	ENSHBUG00000017337	-	84	72.199	Haplochromis_burtoni
MGP_PahariEiJ_G0023498	Rnps1	79	95.982	ENSHGLG00000006292	-	97	94.332	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSHGLG00000013957	RNPS1	100	100.000	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023498	Rnps1	80	82.449	ENSHGLG00100017879	-	80	69.421	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023498	Rnps1	73	92.683	ENSHGLG00100011610	-	84	92.683	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSHGLG00100003539	RNPS1	100	100.000	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023498	Rnps1	92	94.231	ENSHGLG00100015267	-	80	95.495	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023498	Rnps1	99	85.053	ENSSTOG00000013200	RNPS1	100	87.541	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023498	Rnps1	85	82.845	ENSJJAG00000019234	-	68	79.498	Jaculus_jaculus
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSJJAG00000015576	-	100	99.645	Jaculus_jaculus
MGP_PahariEiJ_G0023498	Rnps1	85	71.784	ENSKMAG00000009135	RNPS1	84	67.220	Kryptolebias_marmoratus
MGP_PahariEiJ_G0023498	Rnps1	85	87.917	ENSLACG00000007112	RNPS1	85	87.917	Latimeria_chalumnae
MGP_PahariEiJ_G0023498	Rnps1	85	67.500	ENSLOCG00000001758	RNPS1	84	83.333	Lepisosteus_oculatus
MGP_PahariEiJ_G0023498	Rnps1	86	89.354	ENSMFAG00000044121	-	83	83.265	Macaca_fascicularis
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSMFAG00000042142	RNPS1	100	100.000	Macaca_fascicularis
MGP_PahariEiJ_G0023498	Rnps1	72	100.000	ENSMMUG00000019238	-	80	100.000	Macaca_mulatta
MGP_PahariEiJ_G0023498	Rnps1	88	94.403	ENSMMUG00000041726	-	92	94.297	Macaca_mulatta
MGP_PahariEiJ_G0023498	Rnps1	88	94.776	ENSMNEG00000024827	-	92	94.677	Macaca_nemestrina
MGP_PahariEiJ_G0023498	Rnps1	73	93.237	ENSMLEG00000040232	-	81	93.237	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSMLEG00000036928	RNPS1	100	100.000	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023498	Rnps1	85	70.000	ENSMAMG00000021609	-	84	70.539	Mastacembelus_armatus
MGP_PahariEiJ_G0023498	Rnps1	85	74.583	ENSMAMG00000021148	-	87	68.462	Mastacembelus_armatus
MGP_PahariEiJ_G0023498	Rnps1	85	64.730	ENSMZEG00005006256	-	85	72.199	Maylandia_zebra
MGP_PahariEiJ_G0023498	Rnps1	78	94.977	ENSMGAG00000010042	RNPS1	98	93.249	Meleagris_gallopavo
MGP_PahariEiJ_G0023498	Rnps1	100	99.291	ENSMICG00000031543	RNPS1	100	99.291	Microcebus_murinus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSMOCG00000003429	Rnps1	100	100.000	Microtus_ochrogaster
MGP_PahariEiJ_G0023498	Rnps1	76	66.512	ENSMMOG00000010863	RNPS1	75	65.116	Mola_mola
MGP_PahariEiJ_G0023498	Rnps1	99	97.872	ENSMODG00000015891	RNPS1	92	97.872	Monodelphis_domestica
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSMUSG00000034681	Rnps1	100	100.000	Mus_musculus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	MGP_SPRETEiJ_G0022092	Rnps1	100	100.000	Mus_spretus
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSMLUG00000016808	RNPS1	100	99.344	Myotis_lucifugus
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSNGAG00000023702	Rnps1	100	100.000	Nannospalax_galili
MGP_PahariEiJ_G0023498	Rnps1	76	67.907	ENSNBRG00000023437	RNPS1	75	66.512	Neolamprologus_brichardi
MGP_PahariEiJ_G0023498	Rnps1	89	97.426	ENSNLEG00000009243	RNPS1	100	97.992	Nomascus_leucogenys
MGP_PahariEiJ_G0023498	Rnps1	99	96.797	ENSMEUG00000008882	RNPS1	92	96.797	Notamacropus_eugenii
MGP_PahariEiJ_G0023498	Rnps1	100	96.066	ENSOPRG00000016422	RNPS1	100	96.066	Ochotona_princeps
MGP_PahariEiJ_G0023498	Rnps1	58	64.634	ENSODEG00000002513	-	54	64.516	Octodon_degus
MGP_PahariEiJ_G0023498	Rnps1	57	66.250	ENSODEG00000017258	-	51	64.516	Octodon_degus
MGP_PahariEiJ_G0023498	Rnps1	85	70.000	ENSORLG00015011183	RNPS1	74	71.369	Oryzias_latipes_hsok
MGP_PahariEiJ_G0023498	Rnps1	95	98.621	ENSOARG00000018056	-	81	98.621	Ovis_aries
MGP_PahariEiJ_G0023498	Rnps1	75	98.246	ENSPPAG00000037836	-	96	98.246	Pan_paniscus
MGP_PahariEiJ_G0023498	Rnps1	100	93.262	ENSPPAG00000011845	RNPS1	100	93.262	Pan_paniscus
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSPPRG00000011255	RNPS1	100	99.645	Panthera_pardus
MGP_PahariEiJ_G0023498	Rnps1	63	95.000	ENSPTIG00000015643	RNPS1	85	100.000	Panthera_tigris_altaica
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSPTRG00000031310	RNPS1	100	99.645	Pan_troglodytes
MGP_PahariEiJ_G0023498	Rnps1	73	98.068	ENSPTRG00000046326	-	91	92.887	Pan_troglodytes
MGP_PahariEiJ_G0023498	Rnps1	73	72.947	ENSPANG00000033576	-	75	74.129	Papio_anubis
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSPANG00000015748	RNPS1	100	100.000	Papio_anubis
MGP_PahariEiJ_G0023498	Rnps1	85	80.083	ENSPKIG00000023465	RNPS1	85	80.083	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023498	Rnps1	85	94.142	ENSPSIG00000006048	RNPS1	86	92.015	Pelodiscus_sinensis
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSPEMG00000012797	Rnps1	100	100.000	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023498	Rnps1	61	88.742	ENSPCIG00000016114	-	80	98.387	Phascolarctos_cinereus
MGP_PahariEiJ_G0023498	Rnps1	100	98.227	ENSPCIG00000025012	RNPS1	100	98.227	Phascolarctos_cinereus
MGP_PahariEiJ_G0023498	Rnps1	77	67.742	ENSPFOG00000009978	RNPS1	75	63.889	Poecilia_formosa
MGP_PahariEiJ_G0023498	Rnps1	77	67.742	ENSPLAG00000009343	RNPS1	75	63.889	Poecilia_latipinna
MGP_PahariEiJ_G0023498	Rnps1	77	67.742	ENSPMEG00000008552	RNPS1	75	63.889	Poecilia_mexicana
MGP_PahariEiJ_G0023498	Rnps1	77	67.742	ENSPREG00000001843	RNPS1	75	63.889	Poecilia_reticulata
MGP_PahariEiJ_G0023498	Rnps1	100	97.049	ENSPCAG00000004514	RNPS1	100	97.049	Procavia_capensis
MGP_PahariEiJ_G0023498	Rnps1	100	99.645	ENSPCOG00000005478	RNPS1	100	99.645	Propithecus_coquereli
MGP_PahariEiJ_G0023498	Rnps1	100	99.016	ENSPVAG00000005105	RNPS1	100	99.016	Pteropus_vampyrus
MGP_PahariEiJ_G0023498	Rnps1	85	76.250	ENSPNAG00000025479	RNPS1	84	69.583	Pygocentrus_nattereri
MGP_PahariEiJ_G0023498	Rnps1	100	99.016	ENSRNOG00000008703	Rnps1	100	99.016	Rattus_norvegicus
MGP_PahariEiJ_G0023498	Rnps1	99	99.288	ENSRBIG00000038965	-	99	99.288	Rhinopithecus_bieti
MGP_PahariEiJ_G0023498	Rnps1	89	99.265	ENSRROG00000041252	RNPS1	97	95.798	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023498	Rnps1	100	100.000	ENSSBOG00000027927	RNPS1	100	100.000	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023498	Rnps1	100	97.377	ENSSHAG00000016951	RNPS1	100	97.377	Sarcophilus_harrisii
MGP_PahariEiJ_G0023498	Rnps1	85	76.987	ENSSFOG00015019341	-	75	69.295	Scleropages_formosus
MGP_PahariEiJ_G0023498	Rnps1	85	73.444	ENSSFOG00015022746	RNPS1	87	67.500	Scleropages_formosus
MGP_PahariEiJ_G0023498	Rnps1	85	70.833	ENSSDUG00000011453	RNPS1	84	71.369	Seriola_dumerili
MGP_PahariEiJ_G0023498	Rnps1	82	65.217	ENSSLDG00000021341	RNPS1	76	66.995	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0023498	Rnps1	79	96.281	ENSSARG00000001577	RNPS1	86	96.281	Sorex_araneus
MGP_PahariEiJ_G0023498	Rnps1	85	94.142	ENSSPUG00000016588	RNPS1	86	92.776	Sphenodon_punctatus
MGP_PahariEiJ_G0023498	Rnps1	100	99.016	ENSSSCG00000008048	RNPS1	100	99.016	Sus_scrofa
MGP_PahariEiJ_G0023498	Rnps1	85	94.979	ENSTGUG00000003237	RNPS1	85	95.000	Taeniopygia_guttata
MGP_PahariEiJ_G0023498	Rnps1	85	71.784	ENSTRUG00000008602	RNPS1	84	71.784	Takifugu_rubripes
MGP_PahariEiJ_G0023498	Rnps1	85	72.083	ENSTNIG00000009753	RNPS1	84	72.016	Tetraodon_nigroviridis
MGP_PahariEiJ_G0023498	Rnps1	89	99.265	ENSTBEG00000009098	RNPS1	100	99.265	Tupaia_belangeri
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSTTRG00000008220	RNPS1	100	99.344	Tursiops_truncatus
MGP_PahariEiJ_G0023498	Rnps1	89	99.267	ENSUAMG00000004462	RNPS1	100	99.267	Ursus_americanus
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSUMAG00000022327	RNPS1	100	99.344	Ursus_maritimus
MGP_PahariEiJ_G0023498	Rnps1	100	99.344	ENSVVUG00000009244	RNPS1	100	99.344	Vulpes_vulpes
MGP_PahariEiJ_G0023498	Rnps1	81	72.174	ENSXETG00000024439	rnps1	72	73.094	Xenopus_tropicalis
MGP_PahariEiJ_G0023498	Rnps1	85	67.635	ENSXMAG00000004827	RNPS1	84	64.167	Xiphophorus_maculatus