EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023723 (Gene tree)
Gene ID: 110338528
Gene Symbol: Zc3h12d
Alias: D730019B10Rik|TFL
Full Name: zinc finger CCCH-type containing 12D
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 40205 bases
Position: chr21:32222197-32262401
Accession: 110338528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0056307	RNase_Zc3h12a	PF11977.8	6e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0056307	-	3776	-	MGP_PahariEiJ_P0056307	533 (aa)	XP_021077516	UPI000A314355

Gene Model

Click here to download MGP_PahariEiJ_G0023723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023723's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.534	ENSG00000178199	ZC3H12D	98	91.346	Homo_sapiens
MGP_PahariEiJ_G0023723	Zc3h12d	50	84.962	ENSAMEG00000018283	-	100	84.962	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023723	Zc3h12d	57	70.261	ENSAPLG00000008379	ZC3H12D	94	70.261	Anas_platyrhynchos
MGP_PahariEiJ_G0023723	Zc3h12d	59	64.577	ENSACAG00000006984	ZC3H12D	97	64.577	Anolis_carolinensis
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.481	ENSANAG00000020234	ZC3H12D	100	65.677	Aotus_nancymaae
MGP_PahariEiJ_G0023723	Zc3h12d	99	61.538	ENSBTAG00000007388	ZC3H12D	99	61.538	Bos_taurus
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.469	ENSCJAG00000019606	ZC3H12D	89	75.497	Callithrix_jacchus
MGP_PahariEiJ_G0023723	Zc3h12d	50	83.895	ENSCAFG00000000375	ZC3H12D	69	83.895	Canis_familiaris
MGP_PahariEiJ_G0023723	Zc3h12d	99	60.893	ENSCHIG00000025964	ZC3H12D	99	60.893	Capra_hircus
MGP_PahariEiJ_G0023723	Zc3h12d	90	59.544	ENSCAPG00000014473	ZC3H12D	94	58.058	Cavia_aperea
MGP_PahariEiJ_G0023723	Zc3h12d	90	65.975	ENSCPOG00000014608	ZC3H12D	94	65.768	Cavia_porcellus
MGP_PahariEiJ_G0023723	Zc3h12d	100	63.570	ENSCCAG00000013595	ZC3H12D	100	63.752	Cebus_capucinus
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.416	ENSCATG00000038224	ZC3H12D	100	64.416	Cercocebus_atys
MGP_PahariEiJ_G0023723	Zc3h12d	88	66.311	ENSCLAG00000002831	ZC3H12D	92	67.164	Chinchilla_lanigera
MGP_PahariEiJ_G0023723	Zc3h12d	99	62.976	ENSCSAG00000017217	ZC3H12D	99	62.976	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023723	Zc3h12d	100	63.321	ENSCANG00000028774	ZC3H12D	89	74.834	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023723	Zc3h12d	100	80.483	ENSCGRG00001019159	Zc3h12d	100	80.483	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023723	Zc3h12d	100	80.483	ENSCGRG00000006178	Zc3h12d	100	80.483	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023723	Zc3h12d	60	82.075	ENSDORG00000027483	-	99	82.075	Dipodomys_ordii
MGP_PahariEiJ_G0023723	Zc3h12d	86	64.730	ENSEASG00005008940	ZC3H12D	79	82.328	Equus_asinus_asinus
MGP_PahariEiJ_G0023723	Zc3h12d	100	62.143	ENSECAG00000017135	ZC3H12D	98	62.679	Equus_caballus
MGP_PahariEiJ_G0023723	Zc3h12d	85	75.497	ENSEEUG00000000087	-	84	75.497	Erinaceus_europaeus
MGP_PahariEiJ_G0023723	Zc3h12d	99	63.004	ENSFCAG00000011290	ZC3H12D	94	75.484	Felis_catus
MGP_PahariEiJ_G0023723	Zc3h12d	58	71.336	ENSFALG00000013127	ZC3H12D	98	71.336	Ficedula_albicollis
MGP_PahariEiJ_G0023723	Zc3h12d	54	85.764	ENSFDAG00000000874	ZC3H12D	74	85.764	Fukomys_damarensis
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.351	ENSGGOG00000005511	ZC3H12D	89	75.497	Gorilla_gorilla
MGP_PahariEiJ_G0023723	Zc3h12d	100	72.097	ENSSTOG00000013975	ZC3H12D	100	72.097	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023723	Zc3h12d	56	65.000	ENSLACG00000016816	ZC3H12D	95	65.000	Latimeria_chalumnae
MGP_PahariEiJ_G0023723	Zc3h12d	58	81.029	ENSLAFG00000021535	-	97	81.029	Loxodonta_africana
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.234	ENSMFAG00000034693	ZC3H12D	100	64.234	Macaca_fascicularis
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.051	ENSMNEG00000004043	ZC3H12D	100	64.051	Macaca_nemestrina
MGP_PahariEiJ_G0023723	Zc3h12d	56	69.697	ENSMGAG00000012594	ZC3H12D	92	69.697	Meleagris_gallopavo
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.416	ENSMICG00000044838	ZC3H12D	100	64.781	Microcebus_murinus
MGP_PahariEiJ_G0023723	Zc3h12d	100	80.374	ENSMOCG00000015590	Zc3h12d	100	80.374	Microtus_ochrogaster
MGP_PahariEiJ_G0023723	Zc3h12d	56	78.859	ENSMODG00000016829	-	94	78.859	Monodelphis_domestica
MGP_PahariEiJ_G0023723	Zc3h12d	100	91.932	MGP_CAROLIEiJ_G0015104	Zc3h12d	100	91.932	Mus_caroli
MGP_PahariEiJ_G0023723	Zc3h12d	100	91.557	ENSMUSG00000039981	Zc3h12d	100	91.557	Mus_musculus
MGP_PahariEiJ_G0023723	Zc3h12d	100	92.308	MGP_SPRETEiJ_G0015911	Zc3h12d	100	92.308	Mus_spretus
MGP_PahariEiJ_G0023723	Zc3h12d	51	81.752	ENSMPUG00000018072	-	99	81.752	Mustela_putorius_furo
MGP_PahariEiJ_G0023723	Zc3h12d	58	81.994	ENSMLUG00000029238	ZC3H12D	100	81.994	Myotis_lucifugus
MGP_PahariEiJ_G0023723	Zc3h12d	91	65.574	ENSNGAG00000010502	Zc3h12d	96	65.574	Nannospalax_galili
MGP_PahariEiJ_G0023723	Zc3h12d	86	69.628	ENSNLEG00000015313	-	98	70.695	Nomascus_leucogenys
MGP_PahariEiJ_G0023723	Zc3h12d	52	77.778	ENSMEUG00000004686	-	98	77.778	Notamacropus_eugenii
MGP_PahariEiJ_G0023723	Zc3h12d	100	61.610	ENSOPRG00000014034	ZC3H12D	100	62.547	Ochotona_princeps
MGP_PahariEiJ_G0023723	Zc3h12d	89	66.527	ENSODEG00000002553	ZC3H12D	92	66.527	Octodon_degus
MGP_PahariEiJ_G0023723	Zc3h12d	50	85.714	ENSOCUG00000007690	-	85	85.714	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023723	Zc3h12d	99	61.808	ENSOGAG00000031025	ZC3H12D	99	61.808	Otolemur_garnettii
MGP_PahariEiJ_G0023723	Zc3h12d	95	57.700	ENSOARG00000002626	ZC3H12D	99	57.700	Ovis_aries
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.534	ENSPPAG00000041304	ZC3H12D	100	64.534	Pan_paniscus
MGP_PahariEiJ_G0023723	Zc3h12d	99	60.256	ENSPPRG00000004536	ZC3H12D	94	74.839	Panthera_pardus
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.534	ENSPTRG00000050357	ZC3H12D	100	64.534	Pan_troglodytes
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.416	ENSPANG00000034987	ZC3H12D	100	64.416	Papio_anubis
MGP_PahariEiJ_G0023723	Zc3h12d	56	68.106	ENSPSIG00000016475	ZC3H12D	97	68.106	Pelodiscus_sinensis
MGP_PahariEiJ_G0023723	Zc3h12d	100	80.187	ENSPEMG00000010962	Zc3h12d	100	80.187	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023723	Zc3h12d	100	65.363	ENSPPYG00000017087	ZC3H12D	100	65.363	Pongo_abelii
MGP_PahariEiJ_G0023723	Zc3h12d	100	54.713	ENSPCAG00000002991	ZC3H12D	100	54.713	Procavia_capensis
MGP_PahariEiJ_G0023723	Zc3h12d	100	63.869	ENSPCOG00000017645	ZC3H12D	100	63.869	Propithecus_coquereli
MGP_PahariEiJ_G0023723	Zc3h12d	100	86.116	ENSRNOG00000016041	Zc3h12d	100	86.116	Rattus_norvegicus
MGP_PahariEiJ_G0023723	Zc3h12d	100	63.273	ENSRBIG00000012478	ZC3H12D	100	63.273	Rhinopithecus_bieti
MGP_PahariEiJ_G0023723	Zc3h12d	100	63.273	ENSRROG00000038053	ZC3H12D	100	63.273	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023723	Zc3h12d	100	64.534	ENSSBOG00000023337	ZC3H12D	89	76.159	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023723	Zc3h12d	57	76.721	ENSSHAG00000017000	ZC3H12D	58	76.547	Sarcophilus_harrisii
MGP_PahariEiJ_G0023723	Zc3h12d	100	61.468	ENSSSCG00000004109	ZC3H12D	98	61.468	Sus_scrofa
MGP_PahariEiJ_G0023723	Zc3h12d	58	69.032	ENSTGUG00000010664	ZC3H12D	98	69.032	Taeniopygia_guttata
MGP_PahariEiJ_G0023723	Zc3h12d	58	78.247	ENSTBEG00000000892	-	99	78.247	Tupaia_belangeri