EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023739 (Gene tree)
Gene ID: 110338319
Gene Symbol: Sf3b5
Alias: 10kDa|1110005L13Rik|Sf3b10
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 4151 bases
Position: chr21:37068843-37072993
Accession: 110338319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0056357	SF3b10	PF07189.11	7.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0056357	-	3893	-	MGP_PahariEiJ_P0056357	86 (aa)	XP_021077300	UPI0000003E76

Gene Model

Click here to download MGP_PahariEiJ_G0023739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSG00000169976	SF3B5	100	98.837	Homo_sapiens
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSAPOG00000001721	sf3b5	99	90.588	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSACIG00000008106	sf3b5	99	92.941	Amphilophus_citrinellus
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSAOCG00000023367	sf3b5	99	90.588	Amphiprion_ocellaris
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSAPEG00000004605	sf3b5	99	90.588	Amphiprion_percula
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSATEG00000009720	sf3b5	99	91.765	Anabas_testudineus
MGP_PahariEiJ_G0023739	Sf3b5	100	95.349	ENSACAG00000007948	SF3B5	100	95.349	Anolis_carolinensis
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSANAG00000019999	SF3B5	100	98.837	Aotus_nancymaae
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSACLG00000022410	sf3b5	99	92.941	Astatotilapia_calliptera
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSBTAG00000009795	SF3B5	100	98.837	Bos_taurus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCJAG00000046566	SF3B5	100	98.837	Callithrix_jacchus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCAFG00000032495	SF3B5	100	98.837	Canis_familiaris
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCAFG00020000873	SF3B5	100	98.837	Canis_lupus_dingo
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCHIG00000007987	SF3B5	100	98.837	Capra_hircus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSTSYG00000012236	SF3B5	100	98.837	Carlito_syrichta
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCPOG00000012435	SF3B5	100	98.837	Cavia_porcellus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCCAG00000006528	SF3B5	100	98.837	Cebus_capucinus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCATG00000010192	SF3B5	100	98.837	Cercocebus_atys
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCLAG00000017802	SF3B5	100	98.837	Chinchilla_lanigera
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCSAG00000000187	SF3B5	100	98.837	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	ENSCPBG00000017148	SF3B5	100	97.674	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023739	Sf3b5	97	74.699	ENSCING00000021953	-	97	74.699	Ciona_intestinalis
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSCANG00000002639	SF3B5	100	98.837	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	ENSCGRG00001007249	Sf3b5	100	100.000	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	ENSCGRG00000019185	Sf3b5	100	100.000	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023739	Sf3b5	100	90.698	ENSCSEG00000003216	sf3b5	100	90.698	Cynoglossus_semilaevis
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSCVAG00000005040	sf3b5	99	91.765	Cyprinodon_variegatus
MGP_PahariEiJ_G0023739	Sf3b5	99	94.118	ENSDARG00000016855	sf3b5	99	94.118	Danio_rerio
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSDNOG00000048829	SF3B5	82	98.837	Dasypus_novemcinctus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSDORG00000005838	Sf3b5	100	98.837	Dipodomys_ordii
MGP_PahariEiJ_G0023739	Sf3b5	99	82.353	FBgn0040534	Sf3b5	100	82.353	Drosophila_melanogaster
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSETEG00000004047	SF3B5	100	98.837	Echinops_telfairi
MGP_PahariEiJ_G0023739	Sf3b5	99	81.176	ENSEBUG00000002311	sf3b5	100	81.176	Eptatretus_burgeri
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSEASG00005009522	SF3B5	100	98.837	Equus_asinus_asinus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSECAG00000005457	SF3B5	100	98.837	Equus_caballus
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSELUG00000014290	SF3B5	99	90.588	Esox_lucius
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSFCAG00000000936	SF3B5	100	98.837	Felis_catus
MGP_PahariEiJ_G0023739	Sf3b5	100	94.186	ENSFALG00000015012	SF3B5	100	94.186	Ficedula_albicollis
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSFDAG00000003664	SF3B5	100	98.837	Fukomys_damarensis
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSFHEG00000020301	sf3b5	99	91.765	Fundulus_heteroclitus
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSGMOG00000019972	sf3b5	99	91.765	Gadus_morhua
MGP_PahariEiJ_G0023739	Sf3b5	100	96.512	ENSGALG00000030824	SF3B5	100	96.512	Gallus_gallus
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSGAFG00000000271	sf3b5	99	91.765	Gambusia_affinis
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSGACG00000010363	sf3b5	99	91.765	Gasterosteus_aculeatus
MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	ENSGAGG00000011434	SF3B5	100	97.674	Gopherus_agassizii
MGP_PahariEiJ_G0023739	Sf3b5	100	91.860	ENSGAGG00000000646	-	100	91.860	Gopherus_agassizii
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSGGOG00000001537	SF3B5	100	98.837	Gorilla_gorilla
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSHBUG00000008925	sf3b5	99	92.941	Haplochromis_burtoni
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSHGLG00000021406	SF3B5	100	98.837	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSHGLG00100020370	SF3B5	100	98.837	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSHCOG00000016802	sf3b5	99	90.588	Hippocampus_comes
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSHCOG00000016806	sf3b5	99	90.588	Hippocampus_comes
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSHCOG00000009115	-	99	90.588	Hippocampus_comes
MGP_PahariEiJ_G0023739	Sf3b5	99	94.118	ENSIPUG00000015166	sf3b5	99	94.118	Ictalurus_punctatus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSSTOG00000003347	SF3B5	100	98.837	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSJJAG00000001857	Sf3b5	100	98.837	Jaculus_jaculus
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSKMAG00000002249	sf3b5	99	91.765	Kryptolebias_marmoratus
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSLBEG00000019847	sf3b5	99	91.765	Labrus_bergylta
MGP_PahariEiJ_G0023739	Sf3b5	100	94.186	ENSLACG00000000946	SF3B5	100	94.186	Latimeria_chalumnae
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSLOCG00000017352	sf3b5	99	92.941	Lepisosteus_oculatus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSLAFG00000032489	SF3B5	100	98.837	Loxodonta_africana
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMFAG00000029753	SF3B5	100	98.837	Macaca_fascicularis
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMMUG00000047691	SF3B5	100	98.837	Macaca_mulatta
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMNEG00000028236	SF3B5	100	98.837	Macaca_nemestrina
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMLEG00000007622	SF3B5	100	98.837	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSMAMG00000021639	sf3b5	99	92.941	Mastacembelus_armatus
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSMZEG00005028115	SF3B5	99	92.941	Maylandia_zebra
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSMZEG00005027408	sf3b5	99	92.941	Maylandia_zebra
MGP_PahariEiJ_G0023739	Sf3b5	99	81.176	ENSMZEG00005027407	sf3b5	99	81.176	Maylandia_zebra
MGP_PahariEiJ_G0023739	Sf3b5	100	96.512	ENSMGAG00000015849	SF3B5	100	96.512	Meleagris_gallopavo
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	ENSMAUG00000008283	Sf3b5	100	100.000	Mesocricetus_auratus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMICG00000014922	SF3B5	100	98.837	Microcebus_murinus
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	ENSMOCG00000001713	Sf3b5	100	100.000	Microtus_ochrogaster
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSMMOG00000007956	sf3b5	99	92.941	Mola_mola
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMODG00000023291	SF3B5	83	98.837	Monodelphis_domestica
MGP_PahariEiJ_G0023739	Sf3b5	91	90.123	ENSMALG00000020357	sf3b5	99	90.123	Monopterus_albus
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	MGP_CAROLIEiJ_G0015120	Sf3b5	100	100.000	Mus_caroli
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	ENSMUSG00000078348	Sf3b5	100	100.000	Mus_musculus
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	MGP_SPRETEiJ_G0015928	Sf3b5	100	100.000	Mus_spretus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMPUG00000018379	SF3B5	100	98.837	Mustela_putorius_furo
MGP_PahariEiJ_G0023739	Sf3b5	100	94.186	ENSMLUG00000010802	-	100	94.186	Myotis_lucifugus
MGP_PahariEiJ_G0023739	Sf3b5	93	93.750	ENSMLUG00000025546	-	93	93.750	Myotis_lucifugus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMLUG00000028504	-	100	98.837	Myotis_lucifugus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSNGAG00000010732	Sf3b5	100	98.837	Nannospalax_galili
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSNBRG00000014383	sf3b5	99	92.941	Neolamprologus_brichardi
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSNLEG00000019307	SF3B5	100	98.837	Nomascus_leucogenys
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMEUG00000005445	-	100	98.837	Notamacropus_eugenii
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSMEUG00000005440	-	100	98.837	Notamacropus_eugenii
MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	ENSOPRG00000015107	SF3B5	100	97.674	Ochotona_princeps
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSODEG00000019507	SF3B5	100	98.837	Octodon_degus
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSONIG00000020725	sf3b5	99	92.941	Oreochromis_niloticus
MGP_PahariEiJ_G0023739	Sf3b5	69	98.305	ENSOANG00000015301	SF3B5	97	98.305	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSOCUG00000008752	SF3B5	100	98.837	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023739	Sf3b5	99	94.118	ENSORLG00000004925	sf3b5	99	94.118	Oryzias_latipes
MGP_PahariEiJ_G0023739	Sf3b5	99	94.118	ENSORLG00020011625	sf3b5	99	94.118	Oryzias_latipes_hni
MGP_PahariEiJ_G0023739	Sf3b5	99	94.118	ENSORLG00015017061	sf3b5	99	94.118	Oryzias_latipes_hsok
MGP_PahariEiJ_G0023739	Sf3b5	99	94.118	ENSOMEG00000010620	sf3b5	99	94.118	Oryzias_melastigma
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSOGAG00000012152	SF3B5	100	98.837	Otolemur_garnettii
MGP_PahariEiJ_G0023739	Sf3b5	92	97.468	ENSOARG00000019486	-	95	97.468	Ovis_aries
MGP_PahariEiJ_G0023739	Sf3b5	100	95.349	ENSOARG00000002617	SF3B5	100	95.349	Ovis_aries
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSPPAG00000012940	SF3B5	100	98.837	Pan_paniscus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSPPRG00000021262	SF3B5	100	98.837	Panthera_pardus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSPTIG00000001952	SF3B5	100	98.837	Panthera_tigris_altaica
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSPTRG00000018676	SF3B5	100	98.837	Pan_troglodytes
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSPANG00000034242	SF3B5	100	98.837	Papio_anubis
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSPKIG00000006057	sf3b5	99	92.941	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	ENSPSIG00000001262	SF3B5	100	97.674	Pelodiscus_sinensis
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSPMGG00000014804	sf3b5	99	90.588	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	ENSPEMG00000012931	Sf3b5	100	100.000	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023739	Sf3b5	99	89.412	ENSPMAG00000010296	sf3b5	99	89.412	Petromyzon_marinus
MGP_PahariEiJ_G0023739	Sf3b5	100	77.907	ENSPCIG00000025007	-	100	77.907	Phascolarctos_cinereus
MGP_PahariEiJ_G0023739	Sf3b5	93	98.750	ENSPCIG00000011344	-	78	98.750	Phascolarctos_cinereus
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSPFOG00000019994	sf3b5	99	91.765	Poecilia_formosa
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSPLAG00000008412	sf3b5	99	91.765	Poecilia_latipinna
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSPMEG00000020050	sf3b5	99	91.765	Poecilia_mexicana
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSPREG00000009242	sf3b5	99	91.765	Poecilia_reticulata
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSPPYG00000017068	SF3B5	100	98.837	Pongo_abelii
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSPCAG00000009332	SF3B5	100	98.837	Procavia_capensis
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSPCOG00000013754	SF3B5	100	98.837	Propithecus_coquereli
MGP_PahariEiJ_G0023739	Sf3b5	56	100.000	ENSPVAG00000002820	SF3B5	100	100.000	Pteropus_vampyrus
MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	ENSPNYG00000002075	sf3b5	99	92.941	Pundamilia_nyererei
MGP_PahariEiJ_G0023739	Sf3b5	99	95.294	ENSPNAG00000004942	sf3b5	99	95.294	Pygocentrus_nattereri
MGP_PahariEiJ_G0023739	Sf3b5	100	100.000	ENSRNOG00000014908	Sf3b5	100	100.000	Rattus_norvegicus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSRBIG00000006301	SF3B5	100	98.837	Rhinopithecus_bieti
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSRROG00000037067	SF3B5	100	98.837	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSSBOG00000006122	SF3B5	100	98.837	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	ENSSHAG00000015670	SF3B5	100	97.674	Sarcophilus_harrisii
MGP_PahariEiJ_G0023739	Sf3b5	99	94.118	ENSSFOG00015015767	sf3b5	99	94.118	Scleropages_formosus
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSSMAG00000018852	sf3b5	99	90.588	Scophthalmus_maximus
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSSDUG00000018161	sf3b5	99	91.765	Seriola_dumerili
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSSLDG00000014547	sf3b5	99	91.765	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSSARG00000007820	SF3B5	100	98.837	Sorex_araneus
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSSPAG00000009244	sf3b5	99	90.588	Stegastes_partitus
MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	ENSSPAG00000017371	-	99	90.588	Stegastes_partitus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSSSCG00000035578	SF3B5	100	98.837	Sus_scrofa
MGP_PahariEiJ_G0023739	Sf3b5	100	96.512	ENSTGUG00000010810	SF3B5	100	96.512	Taeniopygia_guttata
MGP_PahariEiJ_G0023739	Sf3b5	100	89.535	ENSTRUG00000005577	sf3b5	100	89.535	Takifugu_rubripes
MGP_PahariEiJ_G0023739	Sf3b5	100	89.535	ENSTNIG00000001265	sf3b5	100	89.535	Tetraodon_nigroviridis
MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	ENSTBEG00000003072	SF3B5	100	97.674	Tupaia_belangeri
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSTTRG00000008817	SF3B5	100	98.837	Tursiops_truncatus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSUAMG00000027296	SF3B5	100	98.837	Ursus_americanus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSUMAG00000005448	SF3B5	100	98.837	Ursus_maritimus
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSVPAG00000003826	SF3B5	100	98.837	Vicugna_pacos
MGP_PahariEiJ_G0023739	Sf3b5	100	98.837	ENSVVUG00000004703	SF3B5	100	98.837	Vulpes_vulpes
MGP_PahariEiJ_G0023739	Sf3b5	100	94.186	ENSXETG00000021409	sf3b5	100	94.186	Xenopus_tropicalis
MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	ENSXMAG00000019971	sf3b5	99	91.765	Xiphophorus_maculatus