EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023883 (Gene tree)
Gene ID: 110338838
Gene Symbol: Rrs1
Alias: 5730466A07Rik|D1Ertd701e
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 2120 bases
Position: chr22:7867897-7870016
Accession: 110338838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0056859	RRS1	PF04939.12	2.8e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0056859	-	2120	-	MGP_PahariEiJ_P0056859	365 (aa)	XP_021077960	UPI000A309E4B

Gene Model

Click here to download MGP_PahariEiJ_G0023883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023883's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023883	Rrs1	100	90.411	ENSG00000179041	RRS1	100	90.411	Homo_sapiens
MGP_PahariEiJ_G0023883	Rrs1	87	66.352	ENSATEG00000011743	rrs1	95	64.688	Anabas_testudineus
MGP_PahariEiJ_G0023883	Rrs1	100	89.315	ENSANAG00000018116	RRS1	100	89.315	Aotus_nancymaae
MGP_PahariEiJ_G0023883	Rrs1	84	65.359	ENSAMXG00000037893	rrs1	85	62.424	Astyanax_mexicanus
MGP_PahariEiJ_G0023883	Rrs1	100	88.767	ENSBTAG00000016716	RRS1	100	88.767	Bos_taurus
MGP_PahariEiJ_G0023883	Rrs1	70	44.151	WBGene00007617	rrbs-1	78	44.151	Caenorhabditis_elegans
MGP_PahariEiJ_G0023883	Rrs1	100	89.315	ENSCJAG00000022034	RRS1	100	89.315	Callithrix_jacchus
MGP_PahariEiJ_G0023883	Rrs1	100	88.767	ENSCAFG00000007313	RRS1	100	88.767	Canis_familiaris
MGP_PahariEiJ_G0023883	Rrs1	100	88.767	ENSCAFG00020016049	-	100	88.767	Canis_lupus_dingo
MGP_PahariEiJ_G0023883	Rrs1	100	88.767	ENSCAFG00020020365	-	100	88.767	Canis_lupus_dingo
MGP_PahariEiJ_G0023883	Rrs1	100	89.041	ENSCHIG00000009141	RRS1	100	89.041	Capra_hircus
MGP_PahariEiJ_G0023883	Rrs1	96	86.246	ENSCPOG00000000647	RRS1	100	87.123	Cavia_porcellus
MGP_PahariEiJ_G0023883	Rrs1	100	89.315	ENSCCAG00000032186	RRS1	100	89.315	Cebus_capucinus
MGP_PahariEiJ_G0023883	Rrs1	100	90.685	ENSCATG00000016944	RRS1	100	90.685	Cercocebus_atys
MGP_PahariEiJ_G0023883	Rrs1	100	90.685	ENSCSAG00000018552	RRS1	100	90.685	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023883	Rrs1	87	92.429	ENSCHOG00000002455	RRS1	100	90.411	Choloepus_hoffmanni
MGP_PahariEiJ_G0023883	Rrs1	87	65.337	ENSCPBG00000021374	RRS1	96	64.307	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023883	Rrs1	87	47.678	ENSCING00000002177	-	99	47.678	Ciona_intestinalis
MGP_PahariEiJ_G0023883	Rrs1	87	47.077	ENSCSAVG00000011819	-	99	47.077	Ciona_savignyi
MGP_PahariEiJ_G0023883	Rrs1	100	89.863	ENSCANG00000012718	RRS1	100	89.863	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023883	Rrs1	100	90.959	ENSCGRG00001002391	-	100	90.959	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023883	Rrs1	98	87.395	ENSCGRG00001015575	-	99	86.275	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023883	Rrs1	82	55.150	ENSCSEG00000014750	rrs1	93	53.571	Cynoglossus_semilaevis
MGP_PahariEiJ_G0023883	Rrs1	84	57.003	ENSCVAG00000017878	rrs1	98	53.005	Cyprinodon_variegatus
MGP_PahariEiJ_G0023883	Rrs1	82	65.000	ENSDARG00000003941	rrs1	95	62.727	Danio_rerio
MGP_PahariEiJ_G0023883	Rrs1	100	88.493	ENSDNOG00000017900	RRS1	99	88.493	Dasypus_novemcinctus
MGP_PahariEiJ_G0023883	Rrs1	61	90.498	ENSDORG00000026331	Rrs1	100	86.245	Dipodomys_ordii
MGP_PahariEiJ_G0023883	Rrs1	79	45.424	FBgn0052409	CG32409	94	43.373	Drosophila_melanogaster
MGP_PahariEiJ_G0023883	Rrs1	55	84.500	ENSETEG00000000935	-	55	84.500	Echinops_telfairi
MGP_PahariEiJ_G0023883	Rrs1	80	54.422	ENSEBUG00000013506	rrs1	96	53.472	Eptatretus_burgeri
MGP_PahariEiJ_G0023883	Rrs1	100	89.863	ENSEASG00005001691	RRS1	100	89.863	Equus_asinus_asinus
MGP_PahariEiJ_G0023883	Rrs1	100	82.740	ENSECAG00000004492	RRS1	100	82.740	Equus_caballus
MGP_PahariEiJ_G0023883	Rrs1	100	88.493	ENSEEUG00000013719	RRS1	100	88.493	Erinaceus_europaeus
MGP_PahariEiJ_G0023883	Rrs1	100	90.137	ENSFCAG00000014332	RRS1	100	90.137	Felis_catus
MGP_PahariEiJ_G0023883	Rrs1	80	63.907	ENSGALG00000030890	RRS1	94	62.500	Gallus_gallus
MGP_PahariEiJ_G0023883	Rrs1	86	60.952	ENSGACG00000002969	rrs1	99	58.263	Gasterosteus_aculeatus
MGP_PahariEiJ_G0023883	Rrs1	87	64.220	ENSGAGG00000023718	RRS1	92	64.392	Gopherus_agassizii
MGP_PahariEiJ_G0023883	Rrs1	100	90.959	ENSGGOG00000026663	RRS1	100	90.959	Gorilla_gorilla
MGP_PahariEiJ_G0023883	Rrs1	100	87.945	ENSHGLG00000021423	RRS1	100	87.945	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023883	Rrs1	100	87.945	ENSHGLG00100020640	RRS1	100	87.945	Heterocephalus_glaber_male
MGP_PahariEiJ_G0023883	Rrs1	99	61.111	ENSHCOG00000015358	rrs1	93	62.908	Hippocampus_comes
MGP_PahariEiJ_G0023883	Rrs1	82	64.094	ENSIPUG00000014412	rrs1	94	62.121	Ictalurus_punctatus
MGP_PahariEiJ_G0023883	Rrs1	100	91.781	ENSSTOG00000026310	RRS1	100	91.781	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023883	Rrs1	84	89.286	ENSJJAG00000011507	-	100	86.957	Jaculus_jaculus
MGP_PahariEiJ_G0023883	Rrs1	100	70.765	ENSJJAG00000020395	-	100	70.492	Jaculus_jaculus
MGP_PahariEiJ_G0023883	Rrs1	82	65.449	ENSKMAG00000008238	rrs1	99	62.388	Kryptolebias_marmoratus
MGP_PahariEiJ_G0023883	Rrs1	85	66.452	ENSLACG00000004058	RRS1	99	65.046	Latimeria_chalumnae
MGP_PahariEiJ_G0023883	Rrs1	84	66.993	ENSLOCG00000017812	rrs1	95	65.231	Lepisosteus_oculatus
MGP_PahariEiJ_G0023883	Rrs1	87	91.483	ENSLAFG00000015405	RRS1	99	88.767	Loxodonta_africana
MGP_PahariEiJ_G0023883	Rrs1	100	90.137	ENSMFAG00000042747	RRS1	100	90.137	Macaca_fascicularis
MGP_PahariEiJ_G0023883	Rrs1	100	90.137	ENSMMUG00000000886	RRS1	100	90.137	Macaca_mulatta
MGP_PahariEiJ_G0023883	Rrs1	100	90.137	ENSMNEG00000011696	RRS1	100	90.137	Macaca_nemestrina
MGP_PahariEiJ_G0023883	Rrs1	100	90.685	ENSMLEG00000004794	RRS1	100	90.685	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023883	Rrs1	82	67.110	ENSMZEG00005004349	RRS1	92	65.046	Maylandia_zebra
MGP_PahariEiJ_G0023883	Rrs1	100	93.151	ENSMAUG00000005392	Rrs1	100	91.233	Mesocricetus_auratus
MGP_PahariEiJ_G0023883	Rrs1	94	92.151	ENSMOCG00000015862	Rrs1	85	92.424	Microtus_ochrogaster
MGP_PahariEiJ_G0023883	Rrs1	90	76.829	ENSMODG00000024952	RRS1	99	75.067	Monodelphis_domestica
MGP_PahariEiJ_G0023883	Rrs1	100	95.342	MGP_CAROLIEiJ_G0013936	Rrs1	100	95.342	Mus_caroli
MGP_PahariEiJ_G0023883	Rrs1	100	95.616	ENSMUSG00000061024	Rrs1	100	95.616	Mus_musculus
MGP_PahariEiJ_G0023883	Rrs1	100	96.164	MGP_SPRETEiJ_G0014739	Rrs1	100	96.164	Mus_spretus
MGP_PahariEiJ_G0023883	Rrs1	100	88.219	ENSMPUG00000018626	RRS1	98	88.219	Mustela_putorius_furo
MGP_PahariEiJ_G0023883	Rrs1	100	90.137	ENSNGAG00000012904	Rrs1	100	90.137	Nannospalax_galili
MGP_PahariEiJ_G0023883	Rrs1	88	83.591	ENSNLEG00000027730	RRS1	96	88.776	Nomascus_leucogenys
MGP_PahariEiJ_G0023883	Rrs1	82	67.110	ENSONIG00000014187	rrs1	95	64.653	Oreochromis_niloticus
MGP_PahariEiJ_G0023883	Rrs1	90	71.299	ENSOANG00000012348	RRS1	98	68.182	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0023883	Rrs1	90	90.826	ENSOCUG00000013490	RRS1	100	86.179	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023883	Rrs1	86	56.825	ENSOMEG00000008525	rrs1	94	55.623	Oryzias_melastigma
MGP_PahariEiJ_G0023883	Rrs1	100	88.493	ENSOGAG00000001085	RRS1	100	88.493	Otolemur_garnettii
MGP_PahariEiJ_G0023883	Rrs1	100	83.562	ENSOARG00000017417	RRS1	98	83.562	Ovis_aries
MGP_PahariEiJ_G0023883	Rrs1	100	90.411	ENSPPAG00000024378	RRS1	100	90.411	Pan_paniscus
MGP_PahariEiJ_G0023883	Rrs1	100	90.137	ENSPPRG00000021408	RRS1	100	90.137	Panthera_pardus
MGP_PahariEiJ_G0023883	Rrs1	100	90.137	ENSPTRG00000030988	RRS1	100	90.137	Pan_troglodytes
MGP_PahariEiJ_G0023883	Rrs1	100	64.932	ENSPANG00000035974	RRS1	100	65.479	Papio_anubis
MGP_PahariEiJ_G0023883	Rrs1	81	66.330	ENSPKIG00000007953	rrs1	93	64.486	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0023883	Rrs1	100	91.781	ENSPEMG00000014427	Rrs1	100	91.781	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023883	Rrs1	82	59.060	ENSPMAG00000006513	rrs1	97	54.743	Petromyzon_marinus
MGP_PahariEiJ_G0023883	Rrs1	84	80.519	ENSPCIG00000026695	RRS1	100	75.272	Phascolarctos_cinereus
MGP_PahariEiJ_G0023883	Rrs1	82	68.771	ENSPFOG00000020722	rrs1	100	66.769	Poecilia_formosa
MGP_PahariEiJ_G0023883	Rrs1	83	57.705	ENSPREG00000019960	rrs1	93	56.156	Poecilia_reticulata
MGP_PahariEiJ_G0023883	Rrs1	81	93.603	ENSPPYG00000018637	RRS1	100	93.603	Pongo_abelii
MGP_PahariEiJ_G0023883	Rrs1	90	90.303	ENSPCAG00000009115	RRS1	100	88.767	Procavia_capensis
MGP_PahariEiJ_G0023883	Rrs1	80	66.096	ENSPNAG00000021707	rrs1	95	63.174	Pygocentrus_nattereri
MGP_PahariEiJ_G0023883	Rrs1	100	94.521	ENSRNOG00000007240	Rrs1	100	94.521	Rattus_norvegicus
MGP_PahariEiJ_G0023883	Rrs1	100	89.863	ENSRBIG00000009132	RRS1	100	89.863	Rhinopithecus_bieti
MGP_PahariEiJ_G0023883	Rrs1	100	89.863	ENSRROG00000013472	RRS1	100	89.863	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023883	Rrs1	100	86.575	ENSSBOG00000011006	-	100	85.753	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023883	Rrs1	100	85.479	ENSSBOG00000012639	-	100	86.849	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023883	Rrs1	80	54.949	ENSSFOG00015015772	rrs1	93	53.354	Scleropages_formosus
MGP_PahariEiJ_G0023883	Rrs1	98	58.696	ENSSMAG00000015226	rrs1	98	60.674	Scophthalmus_maximus
MGP_PahariEiJ_G0023883	Rrs1	82	84.831	ENSSARG00000006976	RRS1	82	84.831	Sorex_araneus
MGP_PahariEiJ_G0023883	Rrs1	100	89.589	ENSSSCG00000006214	RRS1	100	89.589	Sus_scrofa
MGP_PahariEiJ_G0023883	Rrs1	84	63.399	ENSTRUG00000008796	rrs1	94	63.376	Takifugu_rubripes
MGP_PahariEiJ_G0023883	Rrs1	76	66.667	ENSTNIG00000004026	rrs1	99	64.095	Tetraodon_nigroviridis
MGP_PahariEiJ_G0023883	Rrs1	100	89.863	ENSTBEG00000014752	RRS1	100	89.863	Tupaia_belangeri
MGP_PahariEiJ_G0023883	Rrs1	100	89.863	ENSUAMG00000008502	RRS1	100	89.863	Ursus_americanus
MGP_PahariEiJ_G0023883	Rrs1	100	89.041	ENSVVUG00000018452	RRS1	100	89.041	Vulpes_vulpes
MGP_PahariEiJ_G0023883	Rrs1	82	68.227	ENSXCOG00000009809	rrs1	95	65.192	Xiphophorus_couchianus