EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0023902 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 34972 bases
Position: chr22:13428959-13463930
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0056964	Methyltransf_15	PF09445.10	6.6e-30	1	1
MGP_PahariEiJ_P0056964	UPF0020	PF01170.18	4e-05	1	1
MGP_PahariEiJ_P0056964	Met_10	PF02475.16	5.9e-06	1	1
MGP_PahariEiJ_P0056964	Methyltransf_31	PF13847.6	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0056964	-	4201	-	MGP_PahariEiJ_P0056964	819 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0023902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0023902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0023902	-	99	92.148	MGP_PahariEiJ_G0023901	-	100	92.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0023902	-	98	67.281	ENSG00000137574	TGS1	99	67.396	Homo_sapiens
MGP_PahariEiJ_G0023902	-	98	64.931	ENSAMEG00000001781	TGS1	99	65.207	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0023902	-	95	34.296	ENSAOCG00000022799	lyn	70	65.278	Amphiprion_ocellaris
MGP_PahariEiJ_G0023902	-	93	33.210	ENSATEG00000005927	lyn	90	33.958	Anabas_testudineus
MGP_PahariEiJ_G0023902	-	76	45.231	ENSAPLG00000006073	-	97	44.714	Anas_platyrhynchos
MGP_PahariEiJ_G0023902	-	97	42.655	ENSACAG00000017988	TGS1	92	43.043	Anolis_carolinensis
MGP_PahariEiJ_G0023902	-	98	61.601	ENSANAG00000035525	TGS1	99	62.181	Aotus_nancymaae
MGP_PahariEiJ_G0023902	-	97	35.246	ENSACLG00000000261	lyn	98	35.192	Astatotilapia_calliptera
MGP_PahariEiJ_G0023902	-	96	34.937	ENSAMXG00000014086	lyn	97	35.897	Astyanax_mexicanus
MGP_PahariEiJ_G0023902	-	98	60.277	ENSBTAG00000005898	TGS1	99	60.970	Bos_taurus
MGP_PahariEiJ_G0023902	-	98	64.977	ENSCJAG00000016657	TGS1	98	65.323	Callithrix_jacchus
MGP_PahariEiJ_G0023902	-	98	64.005	ENSCAFG00000007011	TGS1	99	64.286	Canis_familiaris
MGP_PahariEiJ_G0023902	-	98	64.286	ENSCAFG00020015485	TGS1	99	64.569	Canis_lupus_dingo
MGP_PahariEiJ_G0023902	-	98	59.954	ENSCHIG00000013976	TGS1	99	60.532	Capra_hircus
MGP_PahariEiJ_G0023902	-	98	65.744	ENSTSYG00000000171	TGS1	99	65.859	Carlito_syrichta
MGP_PahariEiJ_G0023902	-	94	61.009	ENSCAPG00000013732	TGS1	99	60.763	Cavia_aperea
MGP_PahariEiJ_G0023902	-	99	62.844	ENSCPOG00000009713	TGS1	99	62.959	Cavia_porcellus
MGP_PahariEiJ_G0023902	-	98	65.862	ENSCCAG00000030476	TGS1	98	66.207	Cebus_capucinus
MGP_PahariEiJ_G0023902	-	98	67.396	ENSCATG00000035375	TGS1	99	67.166	Cercocebus_atys
MGP_PahariEiJ_G0023902	-	99	65.138	ENSCLAG00000009468	TGS1	99	64.908	Chinchilla_lanigera
MGP_PahariEiJ_G0023902	-	94	67.531	ENSCSAG00000014611	TGS1	99	67.901	Chlorocebus_sabaeus
MGP_PahariEiJ_G0023902	-	98	64.245	ENSCHOG00000001462	TGS1	99	64.360	Choloepus_hoffmanni
MGP_PahariEiJ_G0023902	-	97	47.363	ENSCPBG00000004958	TGS1	99	48.148	Chrysemys_picta_bellii
MGP_PahariEiJ_G0023902	-	98	66.590	ENSCANG00000041389	TGS1	99	66.935	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0023902	-	98	76.752	ENSCGRG00001019470	Tgs1	99	76.285	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0023902	-	98	75.463	ENSCGRG00000008981	Tgs1	99	75.463	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0023902	-	96	34.177	ENSDARG00000107511	lyn	99	61.667	Danio_rerio
MGP_PahariEiJ_G0023902	-	98	63.018	ENSDNOG00000008353	TGS1	99	62.903	Dasypus_novemcinctus
MGP_PahariEiJ_G0023902	-	98	67.288	ENSDORG00000012484	Tgs1	99	66.705	Dipodomys_ordii
MGP_PahariEiJ_G0023902	-	79	68.421	ENSETEG00000005126	TGS1	83	68.421	Echinops_telfairi
MGP_PahariEiJ_G0023902	-	94	67.658	ENSEASG00005016371	TGS1	97	67.155	Equus_asinus_asinus
MGP_PahariEiJ_G0023902	-	98	66.090	ENSECAG00000019399	TGS1	99	66.090	Equus_caballus
MGP_PahariEiJ_G0023902	-	66	92.105	ENSEEUG00000001735	TGS1	68	92.105	Erinaceus_europaeus
MGP_PahariEiJ_G0023902	-	55	65.888	ENSELUG00000012537	lyn	99	35.017	Esox_lucius
MGP_PahariEiJ_G0023902	-	98	64.542	ENSFCAG00000011478	TGS1	99	64.821	Felis_catus
MGP_PahariEiJ_G0023902	-	87	43.819	ENSFALG00000010249	TGS1	99	44.198	Ficedula_albicollis
MGP_PahariEiJ_G0023902	-	98	66.088	ENSFDAG00000011405	TGS1	99	66.204	Fukomys_damarensis
MGP_PahariEiJ_G0023902	-	97	43.444	ENSGALG00000015340	TGS1	99	43.792	Gallus_gallus
MGP_PahariEiJ_G0023902	-	97	46.496	ENSGAGG00000019590	TGS1	99	47.561	Gopherus_agassizii
MGP_PahariEiJ_G0023902	-	98	67.166	ENSGGOG00000008624	TGS1	99	67.512	Gorilla_gorilla
MGP_PahariEiJ_G0023902	-	68	37.649	ENSHBUG00000003518	lyn	98	37.819	Haplochromis_burtoni
MGP_PahariEiJ_G0023902	-	89	63.158	ENSHGLG00000000284	TGS1	99	50.651	Heterocephalus_glaber_female
MGP_PahariEiJ_G0023902	-	97	34.292	ENSIPUG00000002294	tgs1	99	35.523	Ictalurus_punctatus
MGP_PahariEiJ_G0023902	-	98	66.125	ENSSTOG00000009597	TGS1	99	66.705	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0023902	-	98	66.393	ENSJJAG00000016239	Tgs1	100	66.862	Jaculus_jaculus
MGP_PahariEiJ_G0023902	-	95	35.125	ENSLBEG00000027341	-	96	35.553	Labrus_bergylta
MGP_PahariEiJ_G0023902	-	98	39.563	ENSLACG00000008074	TGS1	100	39.563	Latimeria_chalumnae
MGP_PahariEiJ_G0023902	-	98	38.106	ENSLOCG00000005492	lyn	99	38.084	Lepisosteus_oculatus
MGP_PahariEiJ_G0023902	-	98	63.322	ENSLAFG00000015386	TGS1	99	63.322	Loxodonta_africana
MGP_PahariEiJ_G0023902	-	98	66.705	ENSMFAG00000029838	TGS1	99	67.051	Macaca_fascicularis
MGP_PahariEiJ_G0023902	-	98	67.824	ENSMMUG00000005478	TGS1	99	68.171	Macaca_mulatta
MGP_PahariEiJ_G0023902	-	98	66.590	ENSMNEG00000023719	TGS1	99	66.935	Macaca_nemestrina
MGP_PahariEiJ_G0023902	-	98	66.820	ENSMLEG00000034807	TGS1	99	67.051	Mandrillus_leucophaeus
MGP_PahariEiJ_G0023902	-	97	33.757	ENSMAMG00000009542	TGS1	98	33.982	Mastacembelus_armatus
MGP_PahariEiJ_G0023902	-	97	35.088	ENSMZEG00005015681	lyn	98	35.075	Maylandia_zebra
MGP_PahariEiJ_G0023902	-	82	43.467	ENSMGAG00000010966	TGS1	99	43.758	Meleagris_gallopavo
MGP_PahariEiJ_G0023902	-	98	76.285	ENSMAUG00000009875	Tgs1	99	76.285	Mesocricetus_auratus
MGP_PahariEiJ_G0023902	-	98	67.742	ENSMICG00000011199	TGS1	99	67.627	Microcebus_murinus
MGP_PahariEiJ_G0023902	-	98	71.842	ENSMOCG00000019560	Tgs1	100	71.842	Microtus_ochrogaster
MGP_PahariEiJ_G0023902	-	84	54.040	ENSMODG00000009174	TGS1	98	54.834	Monodelphis_domestica
MGP_PahariEiJ_G0023902	-	99	92.761	MGP_CAROLIEiJ_G0025780	-	99	93.129	Mus_caroli
MGP_PahariEiJ_G0023902	-	99	85.450	MGP_CAROLIEiJ_G0025779	-	99	85.797	Mus_caroli
MGP_PahariEiJ_G0023902	-	99	85.006	ENSMUSG00000028233	Tgs1	99	85.582	Mus_musculus
MGP_PahariEiJ_G0023902	-	99	84.873	MGP_SPRETEiJ_G0026727	-	99	85.450	Mus_spretus
MGP_PahariEiJ_G0023902	-	58	98.537	MGP_SPRETEiJ_G0026726	-	99	98.551	Mus_spretus
MGP_PahariEiJ_G0023902	-	94	64.932	ENSMPUG00000010475	TGS1	99	65.594	Mustela_putorius_furo
MGP_PahariEiJ_G0023902	-	98	62.788	ENSMLUG00000014857	TGS1	99	62.673	Myotis_lucifugus
MGP_PahariEiJ_G0023902	-	98	69.525	ENSNGAG00000019532	Tgs1	99	70.336	Nannospalax_galili
MGP_PahariEiJ_G0023902	-	98	66.590	ENSNLEG00000001101	TGS1	99	66.935	Nomascus_leucogenys
MGP_PahariEiJ_G0023902	-	87	65.037	ENSMEUG00000001697	TGS1	91	64.792	Notamacropus_eugenii
MGP_PahariEiJ_G0023902	-	89	60.419	ENSODEG00000002948	TGS1	97	60.419	Octodon_degus
MGP_PahariEiJ_G0023902	-	87	51.685	ENSOANG00000021853	TGS1	98	51.810	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0023902	-	98	65.167	ENSOCUG00000017522	TGS1	99	65.167	Oryctolagus_cuniculus
MGP_PahariEiJ_G0023902	-	98	65.252	ENSOGAG00000012572	TGS1	99	65.252	Otolemur_garnettii
MGP_PahariEiJ_G0023902	-	98	60.253	ENSOARG00000014613	TGS1	99	60.829	Ovis_aries
MGP_PahariEiJ_G0023902	-	98	67.281	ENSPPAG00000039058	TGS1	99	67.627	Pan_paniscus
MGP_PahariEiJ_G0023902	-	98	64.079	ENSPPRG00000000677	TGS1	99	64.245	Panthera_pardus
MGP_PahariEiJ_G0023902	-	98	64.079	ENSPTIG00000005122	TGS1	99	64.245	Panthera_tigris_altaica
MGP_PahariEiJ_G0023902	-	98	67.166	ENSPTRG00000020262	TGS1	99	67.512	Pan_troglodytes
MGP_PahariEiJ_G0023902	-	98	66.475	ENSPANG00000018910	TGS1	99	66.820	Papio_anubis
MGP_PahariEiJ_G0023902	-	98	45.733	ENSPSIG00000014983	TGS1	99	46.637	Pelodiscus_sinensis
MGP_PahariEiJ_G0023902	-	98	75.556	ENSPEMG00000007957	Tgs1	99	76.374	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0023902	-	98	57.683	ENSPCIG00000016232	TGS1	98	58.038	Phascolarctos_cinereus
MGP_PahariEiJ_G0023902	-	74	34.918	ENSPFOG00000001545	-	50	65.278	Poecilia_formosa
MGP_PahariEiJ_G0023902	-	98	67.051	ENSPPYG00000018597	TGS1	99	68.025	Pongo_abelii
MGP_PahariEiJ_G0023902	-	98	61.387	ENSPCAG00000000143	TGS1	99	61.503	Procavia_capensis
MGP_PahariEiJ_G0023902	-	98	67.166	ENSPCOG00000013537	TGS1	99	67.051	Propithecus_coquereli
MGP_PahariEiJ_G0023902	-	98	59.862	ENSPVAG00000016399	TGS1	99	59.631	Pteropus_vampyrus
MGP_PahariEiJ_G0023902	-	74	37.946	ENSPNYG00000023004	lyn	89	35.272	Pundamilia_nyererei
MGP_PahariEiJ_G0023902	-	95	36.247	ENSPNAG00000022249	lyn	97	36.300	Pygocentrus_nattereri
MGP_PahariEiJ_G0023902	-	98	82.030	ENSRNOG00000008156	Tgs1	99	82.030	Rattus_norvegicus
MGP_PahariEiJ_G0023902	-	98	65.629	ENSRBIG00000041893	TGS1	99	66.090	Rhinopithecus_bieti
MGP_PahariEiJ_G0023902	-	98	66.475	ENSRROG00000035127	TGS1	99	66.590	Rhinopithecus_roxellana
MGP_PahariEiJ_G0023902	-	94	67.160	ENSSBOG00000024469	TGS1	99	67.037	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0023902	-	98	53.986	ENSSHAG00000012878	TGS1	100	54.712	Sarcophilus_harrisii
MGP_PahariEiJ_G0023902	-	96	34.668	ENSSFOG00015001308	tgs1	97	34.966	Scleropages_formosus
MGP_PahariEiJ_G0023902	-	95	33.645	ENSSMAG00000019469	lyn	96	35.665	Scophthalmus_maximus
MGP_PahariEiJ_G0023902	-	91	60.229	ENSSSCG00000006251	TGS1	98	60.610	Sus_scrofa
MGP_PahariEiJ_G0023902	-	95	47.163	ENSTGUG00000011050	TGS1	100	47.698	Taeniopygia_guttata
MGP_PahariEiJ_G0023902	-	87	34.282	ENSTNIG00000018133	lyn	99	34.831	Tetraodon_nigroviridis
MGP_PahariEiJ_G0023902	-	83	94.737	ENSTBEG00000010953	TGS1	82	94.737	Tupaia_belangeri
MGP_PahariEiJ_G0023902	-	92	73.214	ENSTTRG00000017239	TGS1	99	55.671	Tursiops_truncatus
MGP_PahariEiJ_G0023902	-	98	65.344	ENSUAMG00000027718	TGS1	99	65.344	Ursus_americanus
MGP_PahariEiJ_G0023902	-	94	65.799	ENSUMAG00000009761	TGS1	99	65.718	Ursus_maritimus
MGP_PahariEiJ_G0023902	-	82	58.413	ENSVPAG00000001166	TGS1	87	58.550	Vicugna_pacos
MGP_PahariEiJ_G0023902	-	94	64.552	ENSVVUG00000017821	TGS1	99	64.728	Vulpes_vulpes
MGP_PahariEiJ_G0023902	-	98	40.791	ENSXETG00000005648	tgs1	99	41.130	Xenopus_tropicalis