EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024114 (Gene tree)
Gene ID: 110338688
Gene Symbol: Polr1e
Alias: 53kDa|D030019D19Rik|Paf53|Praf1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 17932 bases
Position: chr22:49791252-49809183
Accession: 110338688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0057906	RNA_pol_I_A49	PF06870.12	1.6e-103	1	1
MGP_PahariEiJ_P0057902	RNA_pol_I_A49	PF06870.12	2e-103	1	1
MGP_PahariEiJ_P0057903	RNA_pol_I_A49	PF06870.12	2.1e-98	1	1
MGP_PahariEiJ_P0057904	RNA_pol_I_A49	PF06870.12	3e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0057908	-	641	-	-	- (aa)	-	-
MGP_PahariEiJ_T0057904	-	1475	-	MGP_PahariEiJ_P0057904	393 (aa)	-	-
MGP_PahariEiJ_T0057905	-	639	-	-	- (aa)	-	-
MGP_PahariEiJ_T0057906	-	1235	-	MGP_PahariEiJ_P0057906	406 (aa)	-	-
MGP_PahariEiJ_T0057907	-	420	-	-	- (aa)	-	-
MGP_PahariEiJ_T0057902	-	2991	-	MGP_PahariEiJ_P0057902	434 (aa)	-	-
MGP_PahariEiJ_T0057903	-	1714	XM_021222078	MGP_PahariEiJ_P0057903	482 (aa)	XP_021077737	-

Gene Model

Click here to download MGP_PahariEiJ_G0024114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024114	Polr1e	99	79.104	ENSG00000137054	POLR1E	99	78.554	Homo_sapiens
MGP_PahariEiJ_G0024114	Polr1e	98	41.855	ENSAPOG00000012452	polr1e	94	60.000	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024114	Polr1e	99	73.695	ENSAMEG00000010193	POLR1E	99	73.695	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024114	Polr1e	97	43.596	ENSACIG00000009884	polr1e	99	56.977	Amphilophus_citrinellus
MGP_PahariEiJ_G0024114	Polr1e	98	45.363	ENSAOCG00000005665	polr1e	99	45.542	Amphiprion_ocellaris
MGP_PahariEiJ_G0024114	Polr1e	98	45.363	ENSAPEG00000020581	polr1e	99	45.542	Amphiprion_percula
MGP_PahariEiJ_G0024114	Polr1e	97	46.599	ENSATEG00000020609	polr1e	99	46.265	Anabas_testudineus
MGP_PahariEiJ_G0024114	Polr1e	83	54.474	ENSAPLG00000010340	POLR1E	99	56.397	Anas_platyrhynchos
MGP_PahariEiJ_G0024114	Polr1e	99	79.602	ENSANAG00000038046	POLR1E	99	78.554	Aotus_nancymaae
MGP_PahariEiJ_G0024114	Polr1e	98	44.110	ENSACLG00000013685	polr1e	98	44.096	Astatotilapia_calliptera
MGP_PahariEiJ_G0024114	Polr1e	97	43.000	ENSAMXG00000018181	polr1e	98	42.615	Astyanax_mexicanus
MGP_PahariEiJ_G0024114	Polr1e	97	82.025	ENSBTAG00000012243	POLR1E	99	81.250	Bos_taurus
MGP_PahariEiJ_G0024114	Polr1e	99	73.500	ENSCJAG00000010512	POLR1E	93	77.898	Callithrix_jacchus
MGP_PahariEiJ_G0024114	Polr1e	99	80.597	ENSCAFG00000002377	POLR1E	99	80.723	Canis_familiaris
MGP_PahariEiJ_G0024114	Polr1e	97	81.425	ENSCAFG00020017851	POLR1E	99	80.964	Canis_lupus_dingo
MGP_PahariEiJ_G0024114	Polr1e	97	80.506	ENSCHIG00000019479	POLR1E	99	79.759	Capra_hircus
MGP_PahariEiJ_G0024114	Polr1e	97	79.389	ENSTSYG00000002075	POLR1E	99	79.137	Carlito_syrichta
MGP_PahariEiJ_G0024114	Polr1e	71	83.275	ENSCAPG00000015653	POLR1E	99	83.275	Cavia_aperea
MGP_PahariEiJ_G0024114	Polr1e	97	83.461	ENSCPOG00000009965	POLR1E	99	82.651	Cavia_porcellus
MGP_PahariEiJ_G0024114	Polr1e	97	71.756	ENSCCAG00000029460	POLR1E	99	77.558	Cebus_capucinus
MGP_PahariEiJ_G0024114	Polr1e	97	78.626	ENSCATG00000031732	POLR1E	99	81.081	Cercocebus_atys
MGP_PahariEiJ_G0024114	Polr1e	95	82.842	ENSCLAG00000012701	POLR1E	98	82.842	Chinchilla_lanigera
MGP_PahariEiJ_G0024114	Polr1e	97	78.117	ENSCSAG00000010782	POLR1E	99	77.590	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024114	Polr1e	99	69.900	ENSCHOG00000013024	POLR1E	78	79.930	Choloepus_hoffmanni
MGP_PahariEiJ_G0024114	Polr1e	97	65.903	ENSCPBG00000006923	POLR1E	99	65.207	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024114	Polr1e	99	77.805	ENSCANG00000036112	POLR1E	99	80.357	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024114	Polr1e	99	88.453	ENSCGRG00001006197	Polr1e	99	88.453	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024114	Polr1e	99	87.991	ENSCGRG00000006430	Polr1e	99	87.991	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024114	Polr1e	97	42.714	ENSCSEG00000005121	polr1e	99	41.748	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024114	Polr1e	97	42.821	ENSCVAG00000019759	polr1e	99	42.410	Cyprinodon_variegatus
MGP_PahariEiJ_G0024114	Polr1e	94	44.935	ENSDARG00000006434	polr1e	99	43.373	Danio_rerio
MGP_PahariEiJ_G0024114	Polr1e	97	70.362	ENSDNOG00000010257	POLR1E	98	71.861	Dasypus_novemcinctus
MGP_PahariEiJ_G0024114	Polr1e	87	77.183	ENSETEG00000018204	POLR1E	99	77.183	Echinops_telfairi
MGP_PahariEiJ_G0024114	Polr1e	97	80.662	ENSEASG00005000675	POLR1E	99	80.482	Equus_asinus_asinus
MGP_PahariEiJ_G0024114	Polr1e	97	80.407	ENSECAG00000014669	POLR1E	99	80.241	Equus_caballus
MGP_PahariEiJ_G0024114	Polr1e	99	68.395	ENSEEUG00000011928	POLR1E	79	82.022	Erinaceus_europaeus
MGP_PahariEiJ_G0024114	Polr1e	97	46.500	ENSELUG00000008150	polr1e	98	45.433	Esox_lucius
MGP_PahariEiJ_G0024114	Polr1e	99	78.272	ENSFCAG00000013081	POLR1E	99	79.036	Felis_catus
MGP_PahariEiJ_G0024114	Polr1e	97	58.122	ENSFALG00000012950	POLR1E	99	58.122	Ficedula_albicollis
MGP_PahariEiJ_G0024114	Polr1e	97	84.733	ENSFDAG00000016917	POLR1E	99	84.096	Fukomys_damarensis
MGP_PahariEiJ_G0024114	Polr1e	97	44.361	ENSFHEG00000009801	polr1e	99	43.885	Fundulus_heteroclitus
MGP_PahariEiJ_G0024114	Polr1e	93	39.583	ENSGMOG00000003336	POLR1E	97	52.381	Gadus_morhua
MGP_PahariEiJ_G0024114	Polr1e	97	59.796	ENSGALG00000005395	POLR1E	99	58.838	Gallus_gallus
MGP_PahariEiJ_G0024114	Polr1e	97	43.392	ENSGAFG00000004850	polr1e	99	42.959	Gambusia_affinis
MGP_PahariEiJ_G0024114	Polr1e	98	43.243	ENSGACG00000016087	polr1e	99	43.262	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024114	Polr1e	97	58.524	ENSGAGG00000001659	POLR1E	98	65.979	Gopherus_agassizii
MGP_PahariEiJ_G0024114	Polr1e	99	79.104	ENSGGOG00000001882	POLR1E	99	81.081	Gorilla_gorilla
MGP_PahariEiJ_G0024114	Polr1e	98	43.860	ENSHBUG00000002559	polr1e	98	43.855	Haplochromis_burtoni
MGP_PahariEiJ_G0024114	Polr1e	97	83.461	ENSHGLG00000002036	POLR1E	99	82.651	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024114	Polr1e	97	83.715	ENSHGLG00100012784	POLR1E	99	82.892	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024114	Polr1e	97	42.424	ENSHCOG00000002774	polr1e	99	42.892	Hippocampus_comes
MGP_PahariEiJ_G0024114	Polr1e	97	42.857	ENSIPUG00000003019	polr1e	99	42.410	Ictalurus_punctatus
MGP_PahariEiJ_G0024114	Polr1e	97	80.916	ENSSTOG00000009810	POLR1E	99	80.723	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024114	Polr1e	97	82.952	ENSJJAG00000020731	Polr1e	99	80.370	Jaculus_jaculus
MGP_PahariEiJ_G0024114	Polr1e	97	42.857	ENSKMAG00000000046	polr1e	99	42.926	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024114	Polr1e	97	46.465	ENSLBEG00000003104	polr1e	99	45.913	Labrus_bergylta
MGP_PahariEiJ_G0024114	Polr1e	88	62.604	ENSLACG00000003416	POLR1E	99	62.604	Latimeria_chalumnae
MGP_PahariEiJ_G0024114	Polr1e	97	52.030	ENSLOCG00000012859	polr1e	99	50.957	Lepisosteus_oculatus
MGP_PahariEiJ_G0024114	Polr1e	97	79.898	ENSLAFG00000012831	POLR1E	99	79.048	Loxodonta_africana
MGP_PahariEiJ_G0024114	Polr1e	97	78.626	ENSMFAG00000045465	POLR1E	99	81.081	Macaca_fascicularis
MGP_PahariEiJ_G0024114	Polr1e	97	78.626	ENSMMUG00000017892	POLR1E	99	81.081	Macaca_mulatta
MGP_PahariEiJ_G0024114	Polr1e	97	71.960	ENSMNEG00000040283	POLR1E	99	76.987	Macaca_nemestrina
MGP_PahariEiJ_G0024114	Polr1e	97	78.626	ENSMLEG00000031135	POLR1E	99	81.081	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024114	Polr1e	97	44.612	ENSMAMG00000001260	polr1e	98	44.096	Mastacembelus_armatus
MGP_PahariEiJ_G0024114	Polr1e	98	44.361	ENSMZEG00005021536	polr1e	98	44.337	Maylandia_zebra
MGP_PahariEiJ_G0024114	Polr1e	97	90.076	ENSMAUG00000021044	Polr1e	99	87.991	Mesocricetus_auratus
MGP_PahariEiJ_G0024114	Polr1e	99	79.259	ENSMICG00000003673	POLR1E	99	79.518	Microcebus_murinus
MGP_PahariEiJ_G0024114	Polr1e	97	88.804	ENSMOCG00000012920	Polr1e	99	86.605	Microtus_ochrogaster
MGP_PahariEiJ_G0024114	Polr1e	97	45.980	ENSMMOG00000007391	polr1e	99	44.844	Mola_mola
MGP_PahariEiJ_G0024114	Polr1e	93	70.185	ENSMODG00000002884	POLR1E	97	69.697	Monodelphis_domestica
MGP_PahariEiJ_G0024114	Polr1e	97	44.836	ENSMALG00000002665	polr1e	99	44.286	Monopterus_albus
MGP_PahariEiJ_G0024114	Polr1e	100	91.603	MGP_CAROLIEiJ_G0025967	Polr1e	100	91.603	Mus_caroli
MGP_PahariEiJ_G0024114	Polr1e	100	92.875	ENSMUSG00000028318	Polr1e	100	92.875	Mus_musculus
MGP_PahariEiJ_G0024114	Polr1e	100	92.875	MGP_SPRETEiJ_G0026930	Polr1e	100	92.875	Mus_spretus
MGP_PahariEiJ_G0024114	Polr1e	97	74.310	ENSMPUG00000006040	POLR1E	99	74.310	Mustela_putorius_furo
MGP_PahariEiJ_G0024114	Polr1e	97	79.898	ENSMLUG00000012688	POLR1E	98	78.220	Myotis_lucifugus
MGP_PahariEiJ_G0024114	Polr1e	97	86.005	ENSNGAG00000002520	Polr1e	99	83.603	Nannospalax_galili
MGP_PahariEiJ_G0024114	Polr1e	98	44.361	ENSNBRG00000016822	polr1e	98	44.337	Neolamprologus_brichardi
MGP_PahariEiJ_G0024114	Polr1e	99	79.104	ENSNLEG00000003616	POLR1E	99	80.180	Nomascus_leucogenys
MGP_PahariEiJ_G0024114	Polr1e	75	76.250	ENSMEUG00000015372	-	80	76.250	Notamacropus_eugenii
MGP_PahariEiJ_G0024114	Polr1e	68	92.000	ENSOPRG00000014206	POLR1E	91	92.000	Ochotona_princeps
MGP_PahariEiJ_G0024114	Polr1e	97	84.478	ENSODEG00000014565	POLR1E	100	81.395	Octodon_degus
MGP_PahariEiJ_G0024114	Polr1e	100	43.341	ENSONIG00000008921	polr1e	100	43.341	Oreochromis_niloticus
MGP_PahariEiJ_G0024114	Polr1e	97	79.898	ENSOCUG00000024773	POLR1E	99	79.518	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024114	Polr1e	98	43.860	ENSORLG00000005143	polr1e	99	43.614	Oryzias_latipes
MGP_PahariEiJ_G0024114	Polr1e	95	43.557	ENSORLG00020007271	polr1e	99	51.724	Oryzias_latipes_hni
MGP_PahariEiJ_G0024114	Polr1e	98	43.609	ENSORLG00015000137	polr1e	99	43.373	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024114	Polr1e	98	41.855	ENSOMEG00000013264	polr1e	99	41.469	Oryzias_melastigma
MGP_PahariEiJ_G0024114	Polr1e	97	80.916	ENSOGAG00000012981	POLR1E	99	79.294	Otolemur_garnettii
MGP_PahariEiJ_G0024114	Polr1e	97	80.759	ENSOARG00000011465	POLR1E	99	78.241	Ovis_aries
MGP_PahariEiJ_G0024114	Polr1e	99	79.104	ENSPPAG00000034566	POLR1E	99	81.081	Pan_paniscus
MGP_PahariEiJ_G0024114	Polr1e	97	78.626	ENSPPRG00000005649	POLR1E	99	78.554	Panthera_pardus
MGP_PahariEiJ_G0024114	Polr1e	97	78.626	ENSPTIG00000009774	POLR1E	99	78.554	Panthera_tigris_altaica
MGP_PahariEiJ_G0024114	Polr1e	99	79.104	ENSPTRG00000020944	POLR1E	99	81.081	Pan_troglodytes
MGP_PahariEiJ_G0024114	Polr1e	97	78.626	ENSPANG00000025563	POLR1E	99	81.081	Papio_anubis
MGP_PahariEiJ_G0024114	Polr1e	97	46.985	ENSPKIG00000003562	polr1e	99	46.283	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024114	Polr1e	99	60.100	ENSPSIG00000003274	POLR1E	93	60.100	Pelodiscus_sinensis
MGP_PahariEiJ_G0024114	Polr1e	98	43.765	ENSPMGG00000024169	polr1e	97	43.765	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024114	Polr1e	99	88.222	ENSPEMG00000019151	-	99	88.222	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024114	Polr1e	95	79.845	ENSPEMG00000022300	-	99	79.845	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024114	Polr1e	93	70.712	ENSPCIG00000014798	POLR1E	97	70.455	Phascolarctos_cinereus
MGP_PahariEiJ_G0024114	Polr1e	97	42.925	ENSPFOG00000019627	polr1e	100	42.539	Poecilia_formosa
MGP_PahariEiJ_G0024114	Polr1e	97	44.612	ENSPLAG00000022679	polr1e	99	44.125	Poecilia_latipinna
MGP_PahariEiJ_G0024114	Polr1e	88	44.628	ENSPMEG00000022123	polr1e	93	44.628	Poecilia_mexicana
MGP_PahariEiJ_G0024114	Polr1e	97	43.750	ENSPREG00000009470	polr1e	99	43.405	Poecilia_reticulata
MGP_PahariEiJ_G0024114	Polr1e	97	78.117	ENSPPYG00000019061	POLR1E	99	77.590	Pongo_abelii
MGP_PahariEiJ_G0024114	Polr1e	58	79.574	ENSPCAG00000004891	POLR1E	77	79.574	Procavia_capensis
MGP_PahariEiJ_G0024114	Polr1e	97	79.644	ENSPCOG00000027448	POLR1E	99	79.277	Propithecus_coquereli
MGP_PahariEiJ_G0024114	Polr1e	99	81.343	ENSPVAG00000007940	POLR1E	85	81.343	Pteropus_vampyrus
MGP_PahariEiJ_G0024114	Polr1e	98	44.110	ENSPNYG00000001032	polr1e	98	44.096	Pundamilia_nyererei
MGP_PahariEiJ_G0024114	Polr1e	97	43.434	ENSPNAG00000006987	polr1e	95	43.829	Pygocentrus_nattereri
MGP_PahariEiJ_G0024114	Polr1e	99	90.993	ENSRNOG00000012664	Polr1e	99	90.993	Rattus_norvegicus
MGP_PahariEiJ_G0024114	Polr1e	99	78.304	ENSRBIG00000034214	POLR1E	99	77.895	Rhinopithecus_bieti
MGP_PahariEiJ_G0024114	Polr1e	97	78.117	ENSRROG00000031986	POLR1E	99	81.081	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024114	Polr1e	97	79.135	ENSSBOG00000021415	POLR1E	99	77.831	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024114	Polr1e	88	69.081	ENSSHAG00000016084	POLR1E	99	69.081	Sarcophilus_harrisii
MGP_PahariEiJ_G0024114	Polr1e	97	47.355	ENSSFOG00015002293	polr1e	98	46.585	Scleropages_formosus
MGP_PahariEiJ_G0024114	Polr1e	97	47.222	ENSSMAG00000011672	polr1e	91	47.549	Scophthalmus_maximus
MGP_PahariEiJ_G0024114	Polr1e	98	45.250	ENSSDUG00000022279	polr1e	98	45.521	Seriola_dumerili
MGP_PahariEiJ_G0024114	Polr1e	98	45.250	ENSSLDG00000024918	polr1e	98	45.278	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024114	Polr1e	69	68.103	ENSSARG00000009810	-	70	68.103	Sorex_araneus
MGP_PahariEiJ_G0024114	Polr1e	97	65.649	ENSSPUG00000009499	POLR1E	99	64.078	Sphenodon_punctatus
MGP_PahariEiJ_G0024114	Polr1e	98	45.865	ENSSPAG00000021240	polr1e	99	46.024	Stegastes_partitus
MGP_PahariEiJ_G0024114	Polr1e	97	81.772	ENSSSCG00000005347	POLR1E	99	80.964	Sus_scrofa
MGP_PahariEiJ_G0024114	Polr1e	97	49.548	ENSTGUG00000007169	POLR1E	99	52.466	Taeniopygia_guttata
MGP_PahariEiJ_G0024114	Polr1e	97	43.750	ENSTRUG00000020779	polr1e	99	43.603	Takifugu_rubripes
MGP_PahariEiJ_G0024114	Polr1e	97	44.862	ENSTNIG00000017812	polr1e	99	44.365	Tetraodon_nigroviridis
MGP_PahariEiJ_G0024114	Polr1e	99	81.343	ENSTBEG00000013786	POLR1E	86	81.343	Tupaia_belangeri
MGP_PahariEiJ_G0024114	Polr1e	99	80.247	ENSTTRG00000008294	POLR1E	86	80.247	Tursiops_truncatus
MGP_PahariEiJ_G0024114	Polr1e	97	81.679	ENSUAMG00000012474	POLR1E	99	82.143	Ursus_americanus
MGP_PahariEiJ_G0024114	Polr1e	97	81.679	ENSUMAG00000011496	POLR1E	99	81.446	Ursus_maritimus
MGP_PahariEiJ_G0024114	Polr1e	87	74.780	ENSVPAG00000009048	POLR1E	83	74.286	Vicugna_pacos
MGP_PahariEiJ_G0024114	Polr1e	97	81.425	ENSVVUG00000019954	POLR1E	99	80.723	Vulpes_vulpes
MGP_PahariEiJ_G0024114	Polr1e	97	50.251	ENSXETG00000006533	polr1e	99	49.637	Xenopus_tropicalis
MGP_PahariEiJ_G0024114	Polr1e	97	43.142	ENSXCOG00000013706	polr1e	99	53.211	Xiphophorus_couchianus
MGP_PahariEiJ_G0024114	Polr1e	97	44.638	ENSXMAG00000012484	polr1e	99	44.153	Xiphophorus_maculatus