EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0024133 (Gene tree)
Gene ID
110312772
Gene Symbol
Pus1
Alias
A730013B20Rik|MPUS1|mPus1p
Full Name
pseudouridine synthase 1
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Minus strand
Length
8767 bases
Position
chr23:624386-633152
Accession
110312772
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0058017PseudoU_synth_1PF01416.201e-1411
MGP_PahariEiJ_P0058018PseudoU_synth_1PF01416.201e-1411
MGP_PahariEiJ_P0058016PseudoU_synth_1PF01416.201.3e-1411
MGP_PahariEiJ_P0058014PseudoU_synth_1PF01416.201.8e-1311
MGP_PahariEiJ_P0058015PseudoU_synth_1PF01416.202.4e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0058019-686-MGP_PahariEiJ_P0058019147 (aa)--
MGP_PahariEiJ_T0058018-1511XM_021186641MGP_PahariEiJ_P0058018393 (aa)XP_021042300UPI000A3040FC
MGP_PahariEiJ_T0058017-1564XM_021186642MGP_PahariEiJ_P0058017393 (aa)XP_021042301UPI000A3040FC
MGP_PahariEiJ_T0058016-1819XM_021186640MGP_PahariEiJ_P0058016423 (aa)XP_021042299UPI000A307FD9
MGP_PahariEiJ_T0058015-1873-MGP_PahariEiJ_P0058015441 (aa)--
MGP_PahariEiJ_T0058014-1374XM_021186643MGP_PahariEiJ_P0058014347 (aa)XP_021042302UPI000A312E21
MGP_PahariEiJ_T0058020-527-MGP_PahariEiJ_P0058020162 (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0024133's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024133's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0024133Pus110086.216ENSG00000177192PUS110086.216Homo_sapiens
MGP_PahariEiJ_G0024133Pus19368.293ENSAPOG00000007254pus18768.293Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024133Pus19982.353ENSAMEG00000013715PUS110079.572Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024133Pus18969.801ENSACIG00000009169pus18768.715Amphilophus_citrinellus
MGP_PahariEiJ_G0024133Pus19269.945ENSAOCG00000022207pus18769.945Amphiprion_ocellaris
MGP_PahariEiJ_G0024133Pus18971.795ENSAPEG00000006039pus19071.795Amphiprion_percula
MGP_PahariEiJ_G0024133Pus18969.516ENSATEG00000020688pus19069.516Anabas_testudineus
MGP_PahariEiJ_G0024133Pus18878.613ENSACAG00000007367PUS19378.613Anolis_carolinensis
MGP_PahariEiJ_G0024133Pus18390.798ENSANAG00000036192PUS110090.798Aotus_nancymaae
MGP_PahariEiJ_G0024133Pus19368.835ENSACLG00000020868pus19468.835Astatotilapia_calliptera
MGP_PahariEiJ_G0024133Pus18872.046ENSAMXG00000008710pus18172.046Astyanax_mexicanus
MGP_PahariEiJ_G0024133Pus110082.500ENSBTAG00000012990PUS110082.500Bos_taurus
MGP_PahariEiJ_G0024133Pus18538.040WBGene00004248pus-18238.040Caenorhabditis_elegans
MGP_PahariEiJ_G0024133Pus17990.476ENSCJAG00000003720PUS17490.476Callithrix_jacchus
MGP_PahariEiJ_G0024133Pus19781.633ENSCAFG00000006429PUS19781.701Canis_familiaris
MGP_PahariEiJ_G0024133Pus19681.701ENSCAFG00020010737PUS110077.262Canis_lupus_dingo
MGP_PahariEiJ_G0024133Pus110083.544ENSCHIG00000000487PUS110082.500Capra_hircus
MGP_PahariEiJ_G0024133Pus19487.534ENSTSYG00000032605PUS110087.534Carlito_syrichta
MGP_PahariEiJ_G0024133Pus17692.282ENSCAPG00000006421PUS110088.580Cavia_aperea
MGP_PahariEiJ_G0024133Pus19983.797ENSCPOG00000001027PUS110084.348Cavia_porcellus
MGP_PahariEiJ_G0024133Pus110084.500ENSCCAG00000015879PUS110081.860Cebus_capucinus
MGP_PahariEiJ_G0024133Pus110086.466ENSCATG00000032870PUS19985.036Cercocebus_atys
MGP_PahariEiJ_G0024133Pus19389.041ENSCLAG00000011689PUS110084.527Chinchilla_lanigera
MGP_PahariEiJ_G0024133Pus15030.102ENSCLAG00000005232PUSL16330.208Chinchilla_lanigera
MGP_PahariEiJ_G0024133Pus110086.967ENSCSAG00000001879PUS19985.511Chlorocebus_sabaeus
MGP_PahariEiJ_G0024133Pus17980.645ENSCPBG00000024715PUS19377.711Chrysemys_picta_bellii
MGP_PahariEiJ_G0024133Pus19043.575ENSCING00000009426-9543.575Ciona_intestinalis
MGP_PahariEiJ_G0024133Pus19240.997ENSCSAVG00000003751-7539.946Ciona_savignyi
MGP_PahariEiJ_G0024133Pus110078.195ENSCANG00000035561PUS19978.195Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024133Pus110095.035ENSCGRG00001019592Pus110095.035Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024133Pus110095.035ENSCGRG00000004048Pus110095.035Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024133Pus19267.397ENSCSEG00000003629pus18767.397Cynoglossus_semilaevis
MGP_PahariEiJ_G0024133Pus19268.681ENSCVAG00000001265pus18868.681Cyprinodon_variegatus
MGP_PahariEiJ_G0024133Pus18967.529ENSDARG00000045562pus19967.266Danio_rerio
MGP_PahariEiJ_G0024133Pus16730.195ENSDARG00000028976pus36030.195Danio_rerio
MGP_PahariEiJ_G0024133Pus19379.508ENSDNOG00000045576PUS19881.988Dasypus_novemcinctus
MGP_PahariEiJ_G0024133Pus18394.172ENSDORG00000011455Pus110094.172Dipodomys_ordii
MGP_PahariEiJ_G0024133Pus19544.648FBgn0038811PUS19144.648Drosophila_melanogaster
MGP_PahariEiJ_G0024133Pus19079.832ENSETEG00000019160PUS110073.494Echinops_telfairi
MGP_PahariEiJ_G0024133Pus18143.440ENSEBUG00000000368-6343.440Eptatretus_burgeri
MGP_PahariEiJ_G0024133Pus110083.871ENSEASG00005016535PUS110081.651Equus_asinus_asinus
MGP_PahariEiJ_G0024133Pus110084.328ENSECAG00000006965PUS110084.328Equus_caballus
MGP_PahariEiJ_G0024133Pus18870.977ENSELUG00000010424pus18970.977Esox_lucius
MGP_PahariEiJ_G0024133Pus19980.203ENSFCAG00000010780PUS19778.365Felis_catus
MGP_PahariEiJ_G0024133Pus19378.763ENSFALG00000008273PUS18778.763Ficedula_albicollis
MGP_PahariEiJ_G0024133Pus19983.452ENSFDAG00000012518PUS110084.161Fukomys_damarensis
MGP_PahariEiJ_G0024133Pus19368.392ENSFHEG00000010504pus18868.392Fundulus_heteroclitus
MGP_PahariEiJ_G0024133Pus19265.565ENSGMOG00000008143pus19860.599Gadus_morhua
MGP_PahariEiJ_G0024133Pus19875.835ENSGALG00000002354PUS19475.835Gallus_gallus
MGP_PahariEiJ_G0024133Pus19268.681ENSGAFG00000006578pus18768.681Gambusia_affinis
MGP_PahariEiJ_G0024133Pus19264.486ENSGACG00000017566pus19964.486Gasterosteus_aculeatus
MGP_PahariEiJ_G0024133Pus18972.934ENSGAGG00000016730-9476.506Gopherus_agassizii
MGP_PahariEiJ_G0024133Pus110085.714ENSGGOG00000009178PUS19984.086Gorilla_gorilla
MGP_PahariEiJ_G0024133Pus19369.106ENSHBUG00000001316pus19469.106Haplochromis_burtoni
MGP_PahariEiJ_G0024133Pus19983.887ENSHGLG00000016086PUS110083.887Heterocephalus_glaber_female
MGP_PahariEiJ_G0024133Pus19983.376ENSHGLG00100019362PUS110083.376Heterocephalus_glaber_male
MGP_PahariEiJ_G0024133Pus18870.690ENSHCOG00000014288pus18070.690Hippocampus_comes
MGP_PahariEiJ_G0024133Pus18873.333ENSIPUG00000010387pus18773.333Ictalurus_punctatus
MGP_PahariEiJ_G0024133Pus19888.378ENSSTOG00000011245PUS19988.180Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024133Pus110090.331ENSJJAG00000000088Pus110089.625Jaculus_jaculus
MGP_PahariEiJ_G0024133Pus19267.857ENSKMAG00000012702pus18767.857Kryptolebias_marmoratus
MGP_PahariEiJ_G0024133Pus19366.129ENSLBEG00000002845pus19266.129Labrus_bergylta
MGP_PahariEiJ_G0024133Pus18876.218ENSLACG00000018598PUS19273.243Latimeria_chalumnae
MGP_PahariEiJ_G0024133Pus18257.632ENSLACG00000016044-9757.632Latimeria_chalumnae
MGP_PahariEiJ_G0024133Pus18579.580ENSLOCG00000006127pus19274.725Lepisosteus_oculatus
MGP_PahariEiJ_G0024133Pus19480.593ENSLAFG00000028731PUS110080.593Loxodonta_africana
MGP_PahariEiJ_G0024133Pus110086.967ENSMFAG00000041194PUS19986.967Macaca_fascicularis
MGP_PahariEiJ_G0024133Pus110085.000ENSMMUG00000031463PUS19986.979Macaca_mulatta
MGP_PahariEiJ_G0024133Pus110086.717ENSMNEG00000002814PUS19985.273Macaca_nemestrina
MGP_PahariEiJ_G0024133Pus18391.718ENSMLEG00000043560PUS110091.718Mandrillus_leucophaeus
MGP_PahariEiJ_G0024133Pus18769.565ENSMAMG00000007371pus18269.565Mastacembelus_armatus
MGP_PahariEiJ_G0024133Pus19369.106ENSMZEG00005017746pus18769.106Maylandia_zebra
MGP_PahariEiJ_G0024133Pus18380.851ENSMGAG00000001958PUS110080.851Meleagris_gallopavo
MGP_PahariEiJ_G0024133Pus16330.337ENSMGAG00000000851PUS36330.337Meleagris_gallopavo
MGP_PahariEiJ_G0024133Pus110095.035ENSMAUG00000001482Pus110095.035Mesocricetus_auratus
MGP_PahariEiJ_G0024133Pus110083.871ENSMICG00000030980PUS110083.871Microcebus_murinus
MGP_PahariEiJ_G0024133Pus110095.508ENSMOCG00000022311Pus110095.508Microtus_ochrogaster
MGP_PahariEiJ_G0024133Pus19467.209ENSMMOG00000021022pus19467.209Mola_mola
MGP_PahariEiJ_G0024133Pus19971.897ENSMODG00000015551PUS19472.131Monodelphis_domestica
MGP_PahariEiJ_G0024133Pus19267.956ENSMALG00000013202pus18767.956Monopterus_albus
MGP_PahariEiJ_G0024133Pus110099.291MGP_CAROLIEiJ_G0027551Pus110099.291Mus_caroli
MGP_PahariEiJ_G0024133Pus110099.237ENSMUSG00000029507Pus110099.237Mus_musculus
MGP_PahariEiJ_G0024133Pus110099.237MGP_SPRETEiJ_G0028549Pus110099.237Mus_spretus
MGP_PahariEiJ_G0024133Pus19981.658ENSMPUG00000002314PUS110081.658Mustela_putorius_furo
MGP_PahariEiJ_G0024133Pus19085.511ENSMLUG00000015790PUS19685.511Myotis_lucifugus
MGP_PahariEiJ_G0024133Pus110096.071ENSNGAG00000012976Pus110091.931Nannospalax_galili
MGP_PahariEiJ_G0024133Pus19169.832ENSNBRG00000020502pus19470.857Neolamprologus_brichardi
MGP_PahariEiJ_G0024133Pus19587.798ENSNLEG00000008505PUS110092.744Nomascus_leucogenys
MGP_PahariEiJ_G0024133Pus19370.109ENSMEUG00000002825PUS19970.109Notamacropus_eugenii
MGP_PahariEiJ_G0024133Pus19574.801ENSOPRG00000002701-9974.801Ochotona_princeps
MGP_PahariEiJ_G0024133Pus19984.439ENSODEG00000008248PUS19787.634Octodon_degus
MGP_PahariEiJ_G0024133Pus19367.914ENSONIG00000003803pus19367.914Oreochromis_niloticus
MGP_PahariEiJ_G0024133Pus19177.686ENSOANG00000010619PUS19671.942Ornithorhynchus_anatinus
MGP_PahariEiJ_G0024133Pus19384.946ENSOCUG00000007310PUS18484.197Oryctolagus_cuniculus
MGP_PahariEiJ_G0024133Pus18871.098ENSORLG00000010787pus18371.098Oryzias_latipes
MGP_PahariEiJ_G0024133Pus18871.676ENSORLG00020011483pus18570.391Oryzias_latipes_hni
MGP_PahariEiJ_G0024133Pus18871.965ENSORLG00015023012pus18971.965Oryzias_latipes_hsok
MGP_PahariEiJ_G0024133Pus18870.809ENSOMEG00000022655pus18170.809Oryzias_melastigma
MGP_PahariEiJ_G0024133Pus19686.684ENSOGAG00000008720PUS19986.684Otolemur_garnettii
MGP_PahariEiJ_G0024133Pus110082.250ENSOARG00000013316PUS110079.908Ovis_aries
MGP_PahariEiJ_G0024133Pus110085.965ENSPPAG00000040971PUS19984.561Pan_paniscus
MGP_PahariEiJ_G0024133Pus110079.250ENSPPRG00000015456PUS110079.648Panthera_pardus
MGP_PahariEiJ_G0024133Pus18785.673ENSPTIG00000004201PUS19284.463Panthera_tigris_altaica
MGP_PahariEiJ_G0024133Pus110085.464ENSPTRG00000005643PUS19983.848Pan_troglodytes
MGP_PahariEiJ_G0024133Pus110086.466ENSPANG00000000376PUS19985.036Papio_anubis
MGP_PahariEiJ_G0024133Pus19171.588ENSPKIG00000019369pus19465.133Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024133Pus18877.937ENSPSIG00000016432PUS18675.881Pelodiscus_sinensis
MGP_PahariEiJ_G0024133Pus15030.256ENSPSIG00000002781PUSL17130.256Pelodiscus_sinensis
MGP_PahariEiJ_G0024133Pus18769.591ENSPMGG00000004522pus18969.591Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024133Pus110096.454ENSPEMG00000013448Pus110096.454Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024133Pus18360.550ENSPMAG00000004636pus19960.550Petromyzon_marinus
MGP_PahariEiJ_G0024133Pus17382.143ENSPCIG00000022609-7570.032Phascolarctos_cinereus
MGP_PahariEiJ_G0024133Pus19268.132ENSPFOG00000019669pus18768.132Poecilia_formosa
MGP_PahariEiJ_G0024133Pus19268.132ENSPLAG00000002692-8768.132Poecilia_latipinna
MGP_PahariEiJ_G0024133Pus19268.132ENSPLAG00000007185pus18768.132Poecilia_latipinna
MGP_PahariEiJ_G0024133Pus18869.914ENSPMEG00000011115PUS18768.132Poecilia_mexicana
MGP_PahariEiJ_G0024133Pus18869.914ENSPMEG00000006038pus19068.132Poecilia_mexicana
MGP_PahariEiJ_G0024133Pus19268.132ENSPREG00000007231pus19968.347Poecilia_reticulata
MGP_PahariEiJ_G0024133Pus110086.616ENSPPYG00000005132PUS19984.928Pongo_abelii
MGP_PahariEiJ_G0024133Pus17579.310ENSPCAG00000009110-6479.310Procavia_capensis
MGP_PahariEiJ_G0024133Pus110078.000ENSPCOG00000015595PUS110078.000Propithecus_coquereli
MGP_PahariEiJ_G0024133Pus19368.835ENSPNYG00000013571pus18768.835Pundamilia_nyererei
MGP_PahariEiJ_G0024133Pus18873.121ENSPNAG00000003938pus18273.121Pygocentrus_nattereri
MGP_PahariEiJ_G0024133Pus110098.109ENSRNOG00000037500Pus110098.109Rattus_norvegicus
MGP_PahariEiJ_G0024133Pus110086.967ENSRBIG00000043177PUS110086.967Rhinopithecus_bieti
MGP_PahariEiJ_G0024133Pus110086.466ENSRROG00000039744PUS19985.036Rhinopithecus_roxellana
MGP_PahariEiJ_G0024133Pus18644.697YPL212C-6044.697Saccharomyces_cerevisiae
MGP_PahariEiJ_G0024133Pus110085.250ENSSBOG00000023593PUS110085.250Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024133Pus19877.238ENSSHAG00000013193PUS19576.350Sarcophilus_harrisii
MGP_PahariEiJ_G0024133Pus19273.626ENSSFOG00015003463pus18273.626Scleropages_formosus
MGP_PahariEiJ_G0024133Pus18869.628ENSSMAG00000019075pus18766.938Scophthalmus_maximus
MGP_PahariEiJ_G0024133Pus19268.579ENSSDUG00000007102pus18768.579Seriola_dumerili
MGP_PahariEiJ_G0024133Pus19268.033ENSSLDG00000022850pus18768.033Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024133Pus17776.645ENSSARG00000008367PUS19876.645Sorex_araneus
MGP_PahariEiJ_G0024133Pus19476.408ENSSPUG00000010009PUS19376.408Sphenodon_punctatus
MGP_PahariEiJ_G0024133Pus18771.594ENSSPAG00000006272pus18871.594Stegastes_partitus
MGP_PahariEiJ_G0024133Pus110082.750ENSSSCG00000009741PUS110082.750Sus_scrofa
MGP_PahariEiJ_G0024133Pus18483.030ENSTGUG00000008068PUS110083.030Taeniopygia_guttata
MGP_PahariEiJ_G0024133Pus19365.963ENSTRUG00000002198pus19565.963Takifugu_rubripes
MGP_PahariEiJ_G0024133Pus19366.485ENSTNIG00000003942pus19366.757Tetraodon_nigroviridis
MGP_PahariEiJ_G0024133Pus19981.612ENSTTRG00000000632PUS19980.668Tursiops_truncatus
MGP_PahariEiJ_G0024133Pus19982.412ENSUAMG00000017197PUS110082.412Ursus_americanus
MGP_PahariEiJ_G0024133Pus19584.182ENSUMAG00000002831PUS110087.500Ursus_maritimus
MGP_PahariEiJ_G0024133Pus19782.338ENSVVUG00000004199PUS19380.296Vulpes_vulpes
MGP_PahariEiJ_G0024133Pus18150.467ENSXETG00000033640-10050.467Xenopus_tropicalis
MGP_PahariEiJ_G0024133Pus19271.389ENSXETG00000002030pus19071.389Xenopus_tropicalis
MGP_PahariEiJ_G0024133Pus19268.595ENSXCOG00000004722pus19468.595Xiphophorus_couchianus
MGP_PahariEiJ_G0024133Pus19268.407ENSXMAG00000000988pus18768.407Xiphophorus_maculatus

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