EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024198 (Gene tree)
Gene ID: 110313071
Gene Symbol: Pop5
Alias: 1500019J17Rik|2700077E03Rik|Rnasep3
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 9094 bases
Position: chr23:5107862-5116955
Accession: 110313071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0058331	RNase_P_Rpp14	PF01900.19	1.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0058336	-	450	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058334	-	576	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058335	-	534	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058332	-	381	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058333	-	1496	-	MGP_PahariEiJ_P0058333	169 (aa)	-	UPI000A3108FE
MGP_PahariEiJ_T0058331	-	1048	XM_021187101	MGP_PahariEiJ_P0058331	169 (aa)	XP_021042760	UPI000A3108FE

Gene Model

Click here to download MGP_PahariEiJ_G0024198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSG00000167272	POP5	100	84.615	Homo_sapiens
MGP_PahariEiJ_G0024198	Pop5	84	53.521	ENSAPOG00000023686	POP5	99	50.000	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024198	Pop5	100	82.558	ENSAMEG00000008503	POP5	100	82.558	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024198	Pop5	84	54.225	ENSACIG00000018362	pop5	99	51.515	Amphilophus_citrinellus
MGP_PahariEiJ_G0024198	Pop5	84	52.817	ENSAOCG00000001930	pop5	99	50.303	Amphiprion_ocellaris
MGP_PahariEiJ_G0024198	Pop5	84	52.817	ENSAPEG00000006795	pop5	99	50.303	Amphiprion_percula
MGP_PahariEiJ_G0024198	Pop5	91	53.247	ENSATEG00000016792	pop5	99	51.205	Anabas_testudineus
MGP_PahariEiJ_G0024198	Pop5	53	73.034	ENSAPLG00000015761	POP5	100	66.372	Anas_platyrhynchos
MGP_PahariEiJ_G0024198	Pop5	96	54.938	ENSACAG00000003091	POP5	97	54.938	Anolis_carolinensis
MGP_PahariEiJ_G0024198	Pop5	88	89.865	ENSANAG00000023744	POP5	100	83.432	Aotus_nancymaae
MGP_PahariEiJ_G0024198	Pop5	84	54.225	ENSACLG00000021131	-	99	51.205	Astatotilapia_calliptera
MGP_PahariEiJ_G0024198	Pop5	89	52.980	ENSAMXG00000038175	pop5	94	49.693	Astyanax_mexicanus
MGP_PahariEiJ_G0024198	Pop5	100	83.529	ENSBTAG00000005385	POP5	100	83.529	Bos_taurus
MGP_PahariEiJ_G0024198	Pop5	88	89.865	ENSCJAG00000001309	POP5	100	83.432	Callithrix_jacchus
MGP_PahariEiJ_G0024198	Pop5	100	84.706	ENSCAFG00000010389	POP5	100	84.706	Canis_familiaris
MGP_PahariEiJ_G0024198	Pop5	100	84.706	ENSCAFG00020020663	POP5	100	84.706	Canis_lupus_dingo
MGP_PahariEiJ_G0024198	Pop5	100	84.118	ENSCHIG00000016402	POP5	100	84.118	Capra_hircus
MGP_PahariEiJ_G0024198	Pop5	100	85.799	ENSTSYG00000027616	POP5	100	85.799	Carlito_syrichta
MGP_PahariEiJ_G0024198	Pop5	67	82.456	ENSCAPG00000016873	POP5	100	82.456	Cavia_aperea
MGP_PahariEiJ_G0024198	Pop5	100	83.432	ENSCPOG00000012337	POP5	100	83.432	Cavia_porcellus
MGP_PahariEiJ_G0024198	Pop5	88	89.189	ENSCCAG00000023154	POP5	100	82.249	Cebus_capucinus
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSCATG00000036825	POP5	100	84.024	Cercocebus_atys
MGP_PahariEiJ_G0024198	Pop5	100	86.391	ENSCLAG00000007808	POP5	100	86.391	Chinchilla_lanigera
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSCSAG00000002246	POP5	100	84.024	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024198	Pop5	86	72.414	ENSCHOG00000013969	POP5	100	69.412	Choloepus_hoffmanni
MGP_PahariEiJ_G0024198	Pop5	96	66.258	ENSCPBG00000011331	POP5	96	66.258	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024198	Pop5	88	89.865	ENSCANG00000028001	POP5	100	83.432	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024198	Pop5	100	92.308	ENSCGRG00001017974	Pop5	100	92.308	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024198	Pop5	100	92.308	ENSCGRG00000010102	Pop5	100	92.308	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024198	Pop5	91	51.948	ENSCSEG00000008332	-	100	50.595	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024198	Pop5	81	55.474	ENSCSEG00000011103	pop5	91	55.474	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024198	Pop5	90	38.562	ENSCVAG00000009152	-	90	37.908	Cyprinodon_variegatus
MGP_PahariEiJ_G0024198	Pop5	88	54.605	ENSDARG00000053452	pop5	98	52.976	Danio_rerio
MGP_PahariEiJ_G0024198	Pop5	100	82.558	ENSDNOG00000012668	-	90	83.721	Dasypus_novemcinctus
MGP_PahariEiJ_G0024198	Pop5	100	83.529	ENSDNOG00000045952	-	100	84.706	Dasypus_novemcinctus
MGP_PahariEiJ_G0024198	Pop5	100	85.207	ENSDORG00000029401	Pop5	100	85.207	Dipodomys_ordii
MGP_PahariEiJ_G0024198	Pop5	99	81.437	ENSETEG00000009283	POP5	99	81.437	Echinops_telfairi
MGP_PahariEiJ_G0024198	Pop5	87	40.816	ENSEBUG00000016369	pop5	90	40.816	Eptatretus_burgeri
MGP_PahariEiJ_G0024198	Pop5	100	82.353	ENSEASG00005004714	POP5	100	83.529	Equus_asinus_asinus
MGP_PahariEiJ_G0024198	Pop5	100	82.353	ENSECAG00000010012	POP5	100	83.529	Equus_caballus
MGP_PahariEiJ_G0024198	Pop5	96	53.988	ENSELUG00000023394	pop5	100	53.988	Esox_lucius
MGP_PahariEiJ_G0024198	Pop5	100	82.941	ENSFCAG00000042614	POP5	100	82.941	Felis_catus
MGP_PahariEiJ_G0024198	Pop5	89	66.887	ENSFALG00000007537	POP5	95	64.417	Ficedula_albicollis
MGP_PahariEiJ_G0024198	Pop5	96	85.185	ENSFDAG00000009972	POP5	96	85.185	Fukomys_damarensis
MGP_PahariEiJ_G0024198	Pop5	96	53.374	ENSFHEG00000022341	pop5	98	53.374	Fundulus_heteroclitus
MGP_PahariEiJ_G0024198	Pop5	76	55.039	ENSGMOG00000001073	pop5	98	55.039	Gadus_morhua
MGP_PahariEiJ_G0024198	Pop5	88	60.135	ENSGALG00000007124	POP5	56	57.669	Gallus_gallus
MGP_PahariEiJ_G0024198	Pop5	84	57.042	ENSGAFG00000005937	-	97	53.988	Gambusia_affinis
MGP_PahariEiJ_G0024198	Pop5	87	54.422	ENSGACG00000012710	-	90	54.422	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024198	Pop5	96	66.258	ENSGAGG00000016005	POP5	96	66.258	Gopherus_agassizii
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSGGOG00000013505	POP5	100	84.615	Gorilla_gorilla
MGP_PahariEiJ_G0024198	Pop5	84	54.225	ENSHBUG00000011718	-	99	52.381	Haplochromis_burtoni
MGP_PahariEiJ_G0024198	Pop5	100	82.840	ENSHGLG00000011786	POP5	100	82.840	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024198	Pop5	100	82.840	ENSHGLG00100014284	POP5	100	82.840	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024198	Pop5	84	52.817	ENSHCOG00000011809	pop5	99	49.080	Hippocampus_comes
MGP_PahariEiJ_G0024198	Pop5	89	50.667	ENSIPUG00000003437	pop5	100	48.810	Ictalurus_punctatus
MGP_PahariEiJ_G0024198	Pop5	100	87.574	ENSSTOG00000012577	POP5	100	87.574	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024198	Pop5	100	81.871	ENSJJAG00000001080	Pop5	100	84.211	Jaculus_jaculus
MGP_PahariEiJ_G0024198	Pop5	87	51.701	ENSKMAG00000011158	-	99	49.704	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024198	Pop5	91	50.649	ENSLBEG00000008652	pop5	91	49.102	Labrus_bergylta
MGP_PahariEiJ_G0024198	Pop5	84	63.380	ENSLACG00000018188	POP5	88	63.380	Latimeria_chalumnae
MGP_PahariEiJ_G0024198	Pop5	84	54.225	ENSLOCG00000002924	pop5	98	50.909	Lepisosteus_oculatus
MGP_PahariEiJ_G0024198	Pop5	100	84.211	ENSLAFG00000014545	POP5	100	84.211	Loxodonta_africana
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSMFAG00000045933	POP5	99	87.179	Macaca_fascicularis
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSMMUG00000040120	POP5	100	84.615	Macaca_mulatta
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSMNEG00000041716	POP5	100	84.615	Macaca_nemestrina
MGP_PahariEiJ_G0024198	Pop5	88	89.865	ENSMLEG00000029377	POP5	100	84.024	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024198	Pop5	89	54.000	ENSMAMG00000002108	pop5	99	50.602	Mastacembelus_armatus
MGP_PahariEiJ_G0024198	Pop5	84	54.225	ENSMZEG00005000069	-	99	51.497	Maylandia_zebra
MGP_PahariEiJ_G0024198	Pop5	100	93.491	ENSMAUG00000019670	Pop5	100	93.491	Mesocricetus_auratus
MGP_PahariEiJ_G0024198	Pop5	100	87.059	ENSMICG00000008692	POP5	100	88.824	Microcebus_murinus
MGP_PahariEiJ_G0024198	Pop5	100	83.432	ENSMOCG00000013322	Pop5	100	83.432	Microtus_ochrogaster
MGP_PahariEiJ_G0024198	Pop5	85	52.778	ENSMMOG00000010471	pop5	82	54.815	Mola_mola
MGP_PahariEiJ_G0024198	Pop5	100	74.556	ENSMODG00000003066	POP5	68	74.556	Monodelphis_domestica
MGP_PahariEiJ_G0024198	Pop5	84	54.930	ENSMALG00000017797	-	99	50.602	Monopterus_albus
MGP_PahariEiJ_G0024198	Pop5	100	97.041	MGP_CAROLIEiJ_G0027618	Pop5	100	97.041	Mus_caroli
MGP_PahariEiJ_G0024198	Pop5	100	97.041	ENSMUSG00000060152	Pop5	100	97.041	Mus_musculus
MGP_PahariEiJ_G0024198	Pop5	100	95.858	MGP_SPRETEiJ_G0028616	Pop5	100	95.858	Mus_spretus
MGP_PahariEiJ_G0024198	Pop5	88	87.248	ENSMPUG00000003221	POP5	100	82.840	Mustela_putorius_furo
MGP_PahariEiJ_G0024198	Pop5	86	88.514	ENSMLUG00000014657	POP5	99	85.714	Myotis_lucifugus
MGP_PahariEiJ_G0024198	Pop5	100	87.059	ENSNGAG00000002594	Pop5	99	88.757	Nannospalax_galili
MGP_PahariEiJ_G0024198	Pop5	66	53.571	ENSNBRG00000001020	-	83	53.571	Neolamprologus_brichardi
MGP_PahariEiJ_G0024198	Pop5	88	89.865	ENSNLEG00000015839	POP5	100	84.615	Nomascus_leucogenys
MGP_PahariEiJ_G0024198	Pop5	100	74.556	ENSMEUG00000015288	POP5	100	74.556	Notamacropus_eugenii
MGP_PahariEiJ_G0024198	Pop5	86	89.041	ENSOPRG00000004327	POP5	99	84.706	Ochotona_princeps
MGP_PahariEiJ_G0024198	Pop5	100	84.615	ENSODEG00000006549	-	100	84.615	Octodon_degus
MGP_PahariEiJ_G0024198	Pop5	99	73.810	ENSODEG00000010351	-	100	73.810	Octodon_degus
MGP_PahariEiJ_G0024198	Pop5	84	54.225	ENSONIG00000011172	pop5	99	52.976	Oreochromis_niloticus
MGP_PahariEiJ_G0024198	Pop5	68	69.565	ENSOANG00000001792	-	100	71.304	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0024198	Pop5	99	84.615	ENSOCUG00000006537	POP5	99	84.615	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024198	Pop5	82	53.623	ENSORLG00000014745	pop5	83	53.623	Oryzias_latipes
MGP_PahariEiJ_G0024198	Pop5	82	53.623	ENSORLG00020001168	pop5	83	53.623	Oryzias_latipes_hni
MGP_PahariEiJ_G0024198	Pop5	80	54.412	ENSORLG00015013535	pop5	80	54.412	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024198	Pop5	96	50.000	ENSOMEG00000017643	pop5	99	50.000	Oryzias_melastigma
MGP_PahariEiJ_G0024198	Pop5	88	87.248	ENSOGAG00000008528	POP5	91	87.248	Otolemur_garnettii
MGP_PahariEiJ_G0024198	Pop5	100	83.140	ENSOARG00000012764	POP5	100	83.140	Ovis_aries
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSPPAG00000043719	POP5	100	84.615	Pan_paniscus
MGP_PahariEiJ_G0024198	Pop5	100	82.941	ENSPPRG00000006474	POP5	100	82.941	Panthera_pardus
MGP_PahariEiJ_G0024198	Pop5	100	82.941	ENSPTIG00000012194	POP5	100	82.941	Panthera_tigris_altaica
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSPTRG00000005543	POP5	100	84.615	Pan_troglodytes
MGP_PahariEiJ_G0024198	Pop5	88	90.541	ENSPANG00000014166	POP5	100	84.615	Papio_anubis
MGP_PahariEiJ_G0024198	Pop5	88	56.667	ENSPKIG00000025154	pop5	95	55.975	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024198	Pop5	64	69.725	ENSPSIG00000013154	POP5	85	69.725	Pelodiscus_sinensis
MGP_PahariEiJ_G0024198	Pop5	98	48.795	ENSPMGG00000000812	-	100	48.795	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024198	Pop5	100	92.308	ENSPEMG00000017493	Pop5	100	92.308	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024198	Pop5	88	54.054	ENSPFOG00000013000	pop5	94	56.436	Poecilia_formosa
MGP_PahariEiJ_G0024198	Pop5	84	54.225	ENSPLAG00000014070	pop5	85	54.225	Poecilia_latipinna
MGP_PahariEiJ_G0024198	Pop5	87	54.422	ENSPMEG00000012863	POP5	97	52.147	Poecilia_mexicana
MGP_PahariEiJ_G0024198	Pop5	87	54.422	ENSPMEG00000024039	pop5	97	52.147	Poecilia_mexicana
MGP_PahariEiJ_G0024198	Pop5	84	55.634	ENSPREG00000020151	pop5	85	55.634	Poecilia_reticulata
MGP_PahariEiJ_G0024198	Pop5	88	89.865	ENSPPYG00000005036	POP5	84	84.024	Pongo_abelii
MGP_PahariEiJ_G0024198	Pop5	62	90.385	ENSPCAG00000004788	POP5	100	90.385	Procavia_capensis
MGP_PahariEiJ_G0024198	Pop5	100	87.059	ENSPCOG00000017618	POP5	100	88.235	Propithecus_coquereli
MGP_PahariEiJ_G0024198	Pop5	100	84.706	ENSPVAG00000002233	POP5	100	85.882	Pteropus_vampyrus
MGP_PahariEiJ_G0024198	Pop5	84	54.225	ENSPNYG00000002679	pop5	99	52.381	Pundamilia_nyererei
MGP_PahariEiJ_G0024198	Pop5	84	51.049	ENSPNAG00000012662	pop5	97	46.243	Pygocentrus_nattereri
MGP_PahariEiJ_G0024198	Pop5	94	93.711	ENSRNOG00000001199	Pop5	100	93.491	Rattus_norvegicus
MGP_PahariEiJ_G0024198	Pop5	86	89.726	ENSRBIG00000043505	POP5	96	88.742	Rhinopithecus_bieti
MGP_PahariEiJ_G0024198	Pop5	88	89.865	ENSRROG00000045063	POP5	96	88.742	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024198	Pop5	88	89.865	ENSSBOG00000032691	POP5	100	88.235	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024198	Pop5	84	56.643	ENSSFOG00015005630	pop5	100	54.118	Scleropages_formosus
MGP_PahariEiJ_G0024198	Pop5	84	52.778	ENSSMAG00000018868	pop5	85	52.778	Scophthalmus_maximus
MGP_PahariEiJ_G0024198	Pop5	99	52.096	ENSSDUG00000001282	-	99	52.096	Seriola_dumerili
MGP_PahariEiJ_G0024198	Pop5	99	51.497	ENSSLDG00000003801	-	99	51.497	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024198	Pop5	99	51.497	ENSSLDG00000017031	pop5	99	51.497	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024198	Pop5	62	88.462	ENSSARG00000005564	POP5	64	88.462	Sorex_araneus
MGP_PahariEiJ_G0024198	Pop5	84	70.423	ENSSPUG00000015531	POP5	98	64.024	Sphenodon_punctatus
MGP_PahariEiJ_G0024198	Pop5	84	57.042	ENSSPAG00000015306	pop5	99	53.614	Stegastes_partitus
MGP_PahariEiJ_G0024198	Pop5	100	85.882	ENSSSCG00000009912	POP5	100	85.882	Sus_scrofa
MGP_PahariEiJ_G0024198	Pop5	100	62.722	ENSTGUG00000009602	POP5	100	62.722	Taeniopygia_guttata
MGP_PahariEiJ_G0024198	Pop5	99	50.299	ENSTRUG00000016214	pop5	99	50.909	Takifugu_rubripes
MGP_PahariEiJ_G0024198	Pop5	99	52.381	ENSTNIG00000011465	pop5	96	53.988	Tetraodon_nigroviridis
MGP_PahariEiJ_G0024198	Pop5	100	82.840	ENSTBEG00000010131	POP5	100	82.840	Tupaia_belangeri
MGP_PahariEiJ_G0024198	Pop5	100	85.294	ENSTTRG00000000153	POP5	100	85.294	Tursiops_truncatus
MGP_PahariEiJ_G0024198	Pop5	96	82.317	ENSUAMG00000015541	POP5	76	82.317	Ursus_americanus
MGP_PahariEiJ_G0024198	Pop5	100	82.941	ENSUMAG00000006137	POP5	100	82.941	Ursus_maritimus
MGP_PahariEiJ_G0024198	Pop5	100	84.706	ENSVPAG00000010365	POP5	100	84.706	Vicugna_pacos
MGP_PahariEiJ_G0024198	Pop5	100	84.706	ENSVVUG00000021154	POP5	100	84.706	Vulpes_vulpes
MGP_PahariEiJ_G0024198	Pop5	67	63.717	ENSXETG00000031793	POP5	98	63.717	Xenopus_tropicalis
MGP_PahariEiJ_G0024198	Pop5	84	57.042	ENSXMAG00000003508	-	84	53.988	Xiphophorus_maculatus