EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024212 (Gene tree)
Gene ID: 110339194
Gene Symbol: Rab35
Alias: 9530019H02Rik|H-ray|RAB1C
Full Name: RAB35%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 15769 bases
Position: chr23:5502091-5517859
Accession: 110339194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0058403	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0058403	-	2782	-	MGP_PahariEiJ_P0058403	201 (aa)	XP_021078406	UPI000000126C
MGP_PahariEiJ_T0058404	-	967	-	MGP_PahariEiJ_P0058404	55 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0024212	Rab35	59	32.576	MGP_PahariEiJ_G0026253	Arfrp1	87	35.185
MGP_PahariEiJ_G0024212	Rab35	96	37.436	MGP_PahariEiJ_G0018314	Rab5c	89	37.113
MGP_PahariEiJ_G0024212	Rab35	86	33.143	MGP_PahariEiJ_G0022808	Kras	94	32.124
MGP_PahariEiJ_G0024212	Rab35	96	35.052	MGP_PahariEiJ_G0026193	Rab22a	79	40.260
MGP_PahariEiJ_G0024212	Rab35	76	37.419	MGP_PahariEiJ_G0026889	Nras	96	37.671
MGP_PahariEiJ_G0024212	Rab35	97	37.500	MGP_PahariEiJ_G0032112	Rab9	97	37.500
MGP_PahariEiJ_G0024212	Rab35	78	48.734	MGP_PahariEiJ_G0030259	Rab2b	81	49.359
MGP_PahariEiJ_G0024212	Rab35	97	40.609	MGP_PahariEiJ_G0018517	Rab37	89	40.609
MGP_PahariEiJ_G0024212	Rab35	80	33.537	MGP_PahariEiJ_G0015431	Mras	78	33.537
MGP_PahariEiJ_G0024212	Rab35	99	42.105	MGP_PahariEiJ_G0020420	Rab11b	76	48.193
MGP_PahariEiJ_G0024212	Rab35	89	35.789	MGP_PahariEiJ_G0013273	Rab6a	74	39.610
MGP_PahariEiJ_G0024212	Rab35	99	41.000	MGP_PahariEiJ_G0026616	Rab25	95	41.000
MGP_PahariEiJ_G0024212	Rab35	94	46.032	MGP_PahariEiJ_G0029630	Rab15	89	46.032
MGP_PahariEiJ_G0024212	Rab35	99	42.512	MGP_PahariEiJ_G0015211	Rab11a	90	49.635
MGP_PahariEiJ_G0024212	Rab35	100	53.465	MGP_PahariEiJ_G0014033	Rab1b	81	63.580
MGP_PahariEiJ_G0024212	Rab35	78	48.101	MGP_PahariEiJ_G0023919	Rab2a	75	48.101
MGP_PahariEiJ_G0024212	Rab35	84	54.706	MGP_PahariEiJ_G0026671	Rab13	84	54.706
MGP_PahariEiJ_G0024212	Rab35	95	33.158	MGP_PahariEiJ_G0027261	Rab23	75	34.270
MGP_PahariEiJ_G0024212	Rab35	74	30.380	MGP_PahariEiJ_G0017083	Rasl11b	63	30.380
MGP_PahariEiJ_G0024212	Rab35	83	31.325	MGP_PahariEiJ_G0020181	Rabl2	73	31.325
MGP_PahariEiJ_G0024212	Rab35	85	35.227	MGP_PahariEiJ_G0021797	Rheb	88	35.503
MGP_PahariEiJ_G0024212	Rab35	76	31.646	MGP_PahariEiJ_G0029339	-	73	31.447
MGP_PahariEiJ_G0024212	Rab35	78	42.675	MGP_PahariEiJ_G0020730	Rab5a	84	42.675
MGP_PahariEiJ_G0024212	Rab35	95	34.872	MGP_PahariEiJ_G0022362	Rab7	91	46.067
MGP_PahariEiJ_G0024212	Rab35	94	43.455	MGP_PahariEiJ_G0020826	Rab12	70	45.614
MGP_PahariEiJ_G0024212	Rab35	57	30.769	MGP_PahariEiJ_G0029472	Arl4a	59	30.769
MGP_PahariEiJ_G0024212	Rab35	95	46.632	MGP_PahariEiJ_G0018716	Rab18	84	48.851
MGP_PahariEiJ_G0024212	Rab35	97	35.468	MGP_PahariEiJ_G0031967	Rab9b	97	35.000
MGP_PahariEiJ_G0024212	Rab35	96	37.949	MGP_PahariEiJ_G0031135	Rab5b	90	37.949
MGP_PahariEiJ_G0024212	Rab35	76	36.774	MGP_PahariEiJ_G0013880	Hras	81	36.774
MGP_PahariEiJ_G0024212	Rab35	76	38.961	MGP_PahariEiJ_G0015453	Rab6b	74	38.961
MGP_PahariEiJ_G0024212	Rab35	81	37.952	MGP_PahariEiJ_G0030851	Rab36	62	39.521
MGP_PahariEiJ_G0024212	Rab35	91	48.148	MGP_PahariEiJ_G0031589	Rab33a	79	48.148
MGP_PahariEiJ_G0024212	Rab35	96	35.122	MGP_PahariEiJ_G0017931	Rab34	79	35.122
MGP_PahariEiJ_G0024212	Rab35	77	47.500	MGP_PahariEiJ_G0026417	Rab33b	70	47.500
MGP_PahariEiJ_G0024212	Rab35	96	34.021	MGP_PahariEiJ_G0020817	Rab31	83	38.509
MGP_PahariEiJ_G0024212	Rab35	100	53.960	MGP_PahariEiJ_G0016776	Rab1a	99	53.960
MGP_PahariEiJ_G0024212	Rab35	79	45.283	MGP_PahariEiJ_G0024934	Rab14	74	45.283
MGP_PahariEiJ_G0024212	Rab35	86	50.286	MGP_PahariEiJ_G0013212	Rab30	86	50.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSG00000111737	RAB35	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSAPOG00000007363	rab35b	100	94.030	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSAOCG00000005934	rab35b	100	94.030	Amphiprion_ocellaris
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSAPEG00000001130	rab35b	100	94.030	Amphiprion_percula
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSATEG00000013281	rab35b	100	93.532	Anabas_testudineus
MGP_PahariEiJ_G0024212	Rab35	100	99.502	ENSACAG00000003643	RAB35	100	99.502	Anolis_carolinensis
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSANAG00000036954	RAB35	100	100.000	Aotus_nancymaae
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSAMXG00000039865	rab35b	100	93.532	Astyanax_mexicanus
MGP_PahariEiJ_G0024212	Rab35	100	90.547	ENSAMXG00000040604	-	100	90.547	Astyanax_mexicanus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSBTAG00000022044	RAB35	100	100.000	Bos_taurus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSCJAG00000008955	RAB35	100	100.000	Callithrix_jacchus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSCAFG00020018913	RAB35	100	100.000	Canis_lupus_dingo
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSCCAG00000031720	RAB35	100	100.000	Cebus_capucinus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSCATG00000037465	RAB35	100	100.000	Cercocebus_atys
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSCLAG00000013339	RAB35	100	100.000	Chinchilla_lanigera
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSCSAG00000002276	RAB35	100	100.000	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024212	Rab35	100	99.005	ENSCPBG00000012631	RAB35	100	99.005	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024212	Rab35	100	92.537	ENSCGRG00001023636	Rab35	100	92.537	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSCSEG00000013400	rab35b	100	94.030	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSCVAG00000012806	rab35b	100	93.532	Cyprinodon_variegatus
MGP_PahariEiJ_G0024212	Rab35	80	93.750	ENSDARG00000102078	CABZ01072548.1	82	93.750	Danio_rerio
MGP_PahariEiJ_G0024212	Rab35	100	93.035	ENSDARG00000058425	rab35b	100	93.035	Danio_rerio
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSDORG00000000972	Rab35	100	100.000	Dipodomys_ordii
MGP_PahariEiJ_G0024212	Rab35	100	94.527	ENSELUG00000023972	rab35	100	94.527	Esox_lucius
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSFCAG00000032566	RAB35	100	100.000	Felis_catus
MGP_PahariEiJ_G0024212	Rab35	92	97.826	ENSFALG00000007652	RAB35	92	93.878	Ficedula_albicollis
MGP_PahariEiJ_G0024212	Rab35	100	93.035	ENSFHEG00000004891	rab35b	100	93.035	Fundulus_heteroclitus
MGP_PahariEiJ_G0024212	Rab35	95	94.211	ENSGMOG00000017688	rab35b	100	93.035	Gadus_morhua
MGP_PahariEiJ_G0024212	Rab35	100	98.507	ENSGALG00000007308	RAB35	100	98.507	Gallus_gallus
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSGACG00000013548	rab35b	100	94.030	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024212	Rab35	100	99.005	ENSGAGG00000017207	RAB35	100	99.005	Gopherus_agassizii
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSHBUG00000001416	rab35b	100	94.030	Haplochromis_burtoni
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSHGLG00000012703	RAB35	100	100.000	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024212	Rab35	100	91.045	ENSIPUG00000011489	Rab35	100	91.045	Ictalurus_punctatus
MGP_PahariEiJ_G0024212	Rab35	100	91.045	ENSIPUG00000024622	rab35	100	91.045	Ictalurus_punctatus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSJJAG00000010646	Rab35	100	100.000	Jaculus_jaculus
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSKMAG00000006854	rab35b	100	93.532	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSLBEG00000001618	rab35b	100	94.030	Labrus_bergylta
MGP_PahariEiJ_G0024212	Rab35	100	81.373	ENSLACG00000018444	RAB35	100	81.373	Latimeria_chalumnae
MGP_PahariEiJ_G0024212	Rab35	100	93.035	ENSLOCG00000001637	rab35b	98	93.035	Lepisosteus_oculatus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSMFAG00000038261	RAB35	100	100.000	Macaca_fascicularis
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSMMUG00000046831	RAB35	100	100.000	Macaca_mulatta
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSMNEG00000043655	RAB35	100	100.000	Macaca_nemestrina
MGP_PahariEiJ_G0024212	Rab35	100	93.035	ENSMZEG00005002918	rab35b	100	93.035	Maylandia_zebra
MGP_PahariEiJ_G0024212	Rab35	92	98.370	ENSMGAG00000008922	RAB35	100	98.370	Meleagris_gallopavo
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSMAUG00000009328	Rab35	100	100.000	Mesocricetus_auratus
MGP_PahariEiJ_G0024212	Rab35	100	99.005	ENSMICG00000047356	RAB35	100	99.005	Microcebus_murinus
MGP_PahariEiJ_G0024212	Rab35	98	95.408	ENSMOCG00000019999	Rab35	98	95.408	Microtus_ochrogaster
MGP_PahariEiJ_G0024212	Rab35	58	99.145	ENSMALG00000003479	rab35b	75	99.145	Monopterus_albus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	MGP_CAROLIEiJ_G0027632	Rab35	100	100.000	Mus_caroli
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSMUSG00000029518	Rab35	100	100.000	Mus_musculus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	MGP_SPRETEiJ_G0028630	Rab35	100	100.000	Mus_spretus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSODEG00000007219	RAB35	100	100.000	Octodon_degus
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSONIG00000015990	rab35b	100	94.030	Oreochromis_niloticus
MGP_PahariEiJ_G0024212	Rab35	100	94.527	ENSORLG00000028885	rab35b	100	94.527	Oryzias_latipes
MGP_PahariEiJ_G0024212	Rab35	100	94.527	ENSORLG00015010042	rab35b	100	94.527	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSPPRG00000013225	RAB35	100	100.000	Panthera_pardus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSPTRG00000005524	RAB35	100	100.000	Pan_troglodytes
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSPKIG00000025079	rab35b	100	94.030	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024212	Rab35	100	90.594	ENSPKIG00000016213	-	100	90.594	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSPFOG00000006655	rab35b	100	93.532	Poecilia_formosa
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSPLAG00000020989	rab35b	100	93.532	Poecilia_latipinna
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSPMEG00000021947	rab35b	100	93.532	Poecilia_mexicana
MGP_PahariEiJ_G0024212	Rab35	100	99.502	ENSPPYG00000005021	RAB35	100	99.502	Pongo_abelii
MGP_PahariEiJ_G0024212	Rab35	100	99.502	ENSPCOG00000026153	RAB35	100	99.502	Propithecus_coquereli
MGP_PahariEiJ_G0024212	Rab35	100	99.005	ENSPVAG00000003103	RAB35	100	99.005	Pteropus_vampyrus
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSPNYG00000007156	rab35b	100	93.532	Pundamilia_nyererei
MGP_PahariEiJ_G0024212	Rab35	100	90.547	ENSPNAG00000014046	-	100	90.547	Pygocentrus_nattereri
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSRNOG00000022014	Rab35	100	100.000	Rattus_norvegicus
MGP_PahariEiJ_G0024212	Rab35	100	93.532	ENSSFOG00015006076	rab35	100	93.532	Scleropages_formosus
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSSMAG00000000660	rab35b	100	94.030	Scophthalmus_maximus
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSSDUG00000004950	rab35b	100	94.030	Seriola_dumerili
MGP_PahariEiJ_G0024212	Rab35	100	99.502	ENSSPUG00000016258	RAB35	100	99.502	Sphenodon_punctatus
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSSPAG00000008400	rab35b	100	94.030	Stegastes_partitus
MGP_PahariEiJ_G0024212	Rab35	100	100.000	ENSSSCG00000033876	RAB35	100	100.000	Sus_scrofa
MGP_PahariEiJ_G0024212	Rab35	100	97.512	ENSTGUG00000009359	RAB35	100	97.512	Taeniopygia_guttata
MGP_PahariEiJ_G0024212	Rab35	100	94.030	ENSTRUG00000020633	rab35b	100	94.030	Takifugu_rubripes
MGP_PahariEiJ_G0024212	Rab35	100	98.010	ENSXETG00000026943	rab35	100	98.010	Xenopus_tropicalis