EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024219 (Gene tree)
Gene ID: 110312783
Gene Symbol: Srrm4
Alias: 1500001A10Rik|B230202K19Rik|bv|flopsy|fp|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 156045 bases
Position: chr23:6300054-6456098
Accession: 110312783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0058452	SRRM_C	PF15230.6	1.5e-24	1	1
MGP_PahariEiJ_P0058451	SRRM_C	PF15230.6	3.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0058453	-	803	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058452	-	1056	-	MGP_PahariEiJ_P0058452	351 (aa)	-	-
MGP_PahariEiJ_T0058451	-	7460	-	MGP_PahariEiJ_P0058451	604 (aa)	XP_021042321	UPI000A3057DD
MGP_PahariEiJ_T0058450	-	6514	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024219	Srrm4	86	84.291	ENSG00000139767	SRRM4	85	85.000	Homo_sapiens
MGP_PahariEiJ_G0024219	Srrm4	85	76.667	ENSAMEG00000016072	SRRM4	89	80.619	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024219	Srrm4	66	51.300	ENSAPLG00000009202	SRRM4	67	51.358	Anas_platyrhynchos
MGP_PahariEiJ_G0024219	Srrm4	75	86.090	ENSANAG00000020333	SRRM4	83	65.209	Aotus_nancymaae
MGP_PahariEiJ_G0024219	Srrm4	86	79.119	ENSBTAG00000008676	SRRM4	86	80.962	Bos_taurus
MGP_PahariEiJ_G0024219	Srrm4	86	84.674	ENSCJAG00000009146	SRRM4	85	85.385	Callithrix_jacchus
MGP_PahariEiJ_G0024219	Srrm4	85	81.154	ENSCAFG00000023113	SRRM4	85	83.269	Canis_familiaris
MGP_PahariEiJ_G0024219	Srrm4	75	83.712	ENSCAFG00020018665	SRRM4	55	82.278	Canis_lupus_dingo
MGP_PahariEiJ_G0024219	Srrm4	75	82.836	ENSCHIG00000019151	SRRM4	85	64.818	Capra_hircus
MGP_PahariEiJ_G0024219	Srrm4	78	82.427	ENSTSYG00000012239	SRRM4	84	83.019	Carlito_syrichta
MGP_PahariEiJ_G0024219	Srrm4	82	75.400	ENSCAPG00000008729	SRRM4	88	83.476	Cavia_aperea
MGP_PahariEiJ_G0024219	Srrm4	86	83.877	ENSCPOG00000003544	SRRM4	85	84.586	Cavia_porcellus
MGP_PahariEiJ_G0024219	Srrm4	86	83.908	ENSCCAG00000022479	SRRM4	85	84.615	Cebus_capucinus
MGP_PahariEiJ_G0024219	Srrm4	86	83.716	ENSCATG00000036343	SRRM4	85	84.423	Cercocebus_atys
MGP_PahariEiJ_G0024219	Srrm4	86	84.615	ENSCLAG00000009764	SRRM4	85	85.356	Chinchilla_lanigera
MGP_PahariEiJ_G0024219	Srrm4	86	84.100	ENSCSAG00000002300	SRRM4	85	84.808	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024219	Srrm4	75	62.630	ENSCPBG00000012293	SRRM4	65	57.882	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024219	Srrm4	86	81.154	ENSCANG00000031719	SRRM4	85	81.660	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024219	Srrm4	85	89.729	ENSCGRG00001000544	Srrm4	86	89.341	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024219	Srrm4	86	84.942	ENSCGRG00000006973	Srrm4	69	91.214	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024219	Srrm4	85	81.310	ENSDNOG00000000260	SRRM4	88	82.081	Dasypus_novemcinctus
MGP_PahariEiJ_G0024219	Srrm4	86	75.048	ENSDORG00000015243	Srrm4	65	77.778	Dipodomys_ordii
MGP_PahariEiJ_G0024219	Srrm4	85	80.658	ENSEASG00005008759	SRRM4	87	82.115	Equus_asinus_asinus
MGP_PahariEiJ_G0024219	Srrm4	85	81.044	ENSECAG00000021729	SRRM4	87	82.500	Equus_caballus
MGP_PahariEiJ_G0024219	Srrm4	85	84.333	ENSFCAG00000010536	SRRM4	83	85.192	Felis_catus
MGP_PahariEiJ_G0024219	Srrm4	85	81.625	ENSFDAG00000007218	SRRM4	85	81.923	Fukomys_damarensis
MGP_PahariEiJ_G0024219	Srrm4	86	84.483	ENSGGOG00000005338	SRRM4	85	85.192	Gorilla_gorilla
MGP_PahariEiJ_G0024219	Srrm4	85	81.467	ENSHGLG00000007830	SRRM4	86	83.462	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024219	Srrm4	74	78.868	ENSHGLG00100008549	SRRM4	90	72.222	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024219	Srrm4	78	73.529	ENSSTOG00000026642	SRRM4	83	71.368	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024219	Srrm4	74	83.270	ENSJJAG00000016448	Srrm4	81	80.084	Jaculus_jaculus
MGP_PahariEiJ_G0024219	Srrm4	85	83.527	ENSLAFG00000003731	SRRM4	84	82.625	Loxodonta_africana
MGP_PahariEiJ_G0024219	Srrm4	86	84.291	ENSMFAG00000041271	SRRM4	84	85.000	Macaca_fascicularis
MGP_PahariEiJ_G0024219	Srrm4	84	71.429	ENSMMUG00000021230	SRRM4	65	75.123	Macaca_mulatta
MGP_PahariEiJ_G0024219	Srrm4	86	84.100	ENSMNEG00000044154	SRRM4	84	84.808	Macaca_nemestrina
MGP_PahariEiJ_G0024219	Srrm4	86	84.483	ENSMLEG00000034455	SRRM4	85	85.192	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024219	Srrm4	85	58.647	ENSMGAG00000009082	SRRM4	65	57.214	Meleagris_gallopavo
MGP_PahariEiJ_G0024219	Srrm4	85	89.341	ENSMAUG00000013203	Srrm4	86	88.953	Mesocricetus_auratus
MGP_PahariEiJ_G0024219	Srrm4	86	84.100	ENSMICG00000012386	SRRM4	85	84.808	Microcebus_murinus
MGP_PahariEiJ_G0024219	Srrm4	85	88.372	ENSMOCG00000006737	Srrm4	86	90.698	Microtus_ochrogaster
MGP_PahariEiJ_G0024219	Srrm4	85	55.851	ENSMODG00000015283	SRRM4	65	53.286	Monodelphis_domestica
MGP_PahariEiJ_G0024219	Srrm4	100	96.865	MGP_CAROLIEiJ_G0027638	Srrm4	100	96.865	Mus_caroli
MGP_PahariEiJ_G0024219	Srrm4	100	96.053	ENSMUSG00000063919	Srrm4	100	96.053	Mus_musculus
MGP_PahariEiJ_G0024219	Srrm4	100	96.066	MGP_SPRETEiJ_G0028637	Srrm4	100	96.066	Mus_spretus
MGP_PahariEiJ_G0024219	Srrm4	85	81.044	ENSMPUG00000002930	SRRM4	86	83.269	Mustela_putorius_furo
MGP_PahariEiJ_G0024219	Srrm4	86	84.895	ENSNGAG00000020807	Srrm4	86	86.372	Nannospalax_galili
MGP_PahariEiJ_G0024219	Srrm4	86	84.291	ENSNLEG00000000200	SRRM4	85	85.000	Nomascus_leucogenys
MGP_PahariEiJ_G0024219	Srrm4	85	75.810	ENSOPRG00000016981	SRRM4	77	74.811	Ochotona_princeps
MGP_PahariEiJ_G0024219	Srrm4	85	83.815	ENSODEG00000006291	SRRM4	85	84.586	Octodon_degus
MGP_PahariEiJ_G0024219	Srrm4	85	83.398	ENSOCUG00000004503	SRRM4	77	81.958	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024219	Srrm4	86	83.333	ENSOGAG00000015431	SRRM4	85	84.038	Otolemur_garnettii
MGP_PahariEiJ_G0024219	Srrm4	86	81.418	ENSOARG00000002063	SRRM4	86	82.308	Ovis_aries
MGP_PahariEiJ_G0024219	Srrm4	78	83.857	ENSPPAG00000028134	SRRM4	84	84.454	Pan_paniscus
MGP_PahariEiJ_G0024219	Srrm4	85	83.946	ENSPPRG00000002659	SRRM4	84	84.808	Panthera_pardus
MGP_PahariEiJ_G0024219	Srrm4	86	84.483	ENSPTRG00000005517	SRRM4	85	85.192	Pan_troglodytes
MGP_PahariEiJ_G0024219	Srrm4	86	84.100	ENSPANG00000022544	SRRM4	99	84.510	Papio_anubis
MGP_PahariEiJ_G0024219	Srrm4	85	90.716	ENSPEMG00000001823	Srrm4	86	90.329	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024219	Srrm4	75	86.792	ENSPPYG00000005014	SRRM4	83	72.708	Pongo_abelii
MGP_PahariEiJ_G0024219	Srrm4	75	79.924	ENSPCAG00000016401	SRRM4	68	74.051	Procavia_capensis
MGP_PahariEiJ_G0024219	Srrm4	86	84.100	ENSPCOG00000013803	SRRM4	86	84.808	Propithecus_coquereli
MGP_PahariEiJ_G0024219	Srrm4	78	82.600	ENSPVAG00000017487	SRRM4	85	83.403	Pteropus_vampyrus
MGP_PahariEiJ_G0024219	Srrm4	85	95.543	ENSRNOG00000001141	Srrm4	86	95.543	Rattus_norvegicus
MGP_PahariEiJ_G0024219	Srrm4	75	84.211	ENSRBIG00000040107	SRRM4	80	73.263	Rhinopithecus_bieti
MGP_PahariEiJ_G0024219	Srrm4	75	85.338	ENSRROG00000035868	SRRM4	80	73.474	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024219	Srrm4	86	77.395	ENSSBOG00000035310	SRRM4	85	78.077	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024219	Srrm4	78	62.450	ENSSHAG00000017330	SRRM4	87	63.454	Sarcophilus_harrisii
MGP_PahariEiJ_G0024219	Srrm4	75	78.571	ENSSARG00000012647	SRRM4	83	64.271	Sorex_araneus
MGP_PahariEiJ_G0024219	Srrm4	86	82.759	ENSSSCG00000009845	SRRM4	85	83.462	Sus_scrofa
MGP_PahariEiJ_G0024219	Srrm4	63	55.499	ENSTGUG00000009228	SRRM4	66	55.784	Taeniopygia_guttata
MGP_PahariEiJ_G0024219	Srrm4	76	85.517	ENSVPAG00000007937	SRRM4	71	83.969	Vicugna_pacos
MGP_PahariEiJ_G0024219	Srrm4	75	82.955	ENSVVUG00000013334	SRRM4	74	83.088	Vulpes_vulpes
MGP_PahariEiJ_G0024219	Srrm4	62	47.507	ENSXETG00000019934	SRRM4	53	50.865	Xenopus_tropicalis