EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024238 (Gene tree)
Gene ID: 110312955
Gene Symbol: Rbm19
Alias: 1200009A02Rik
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 83389 bases
Position: chr23:9983987-10067375
Accession: 1921361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0058541	RRM_1	PF00076.22	1.3e-87	1	5
MGP_PahariEiJ_P0058541	RRM_1	PF00076.22	1.3e-87	2	5
MGP_PahariEiJ_P0058541	RRM_1	PF00076.22	1.3e-87	3	5
MGP_PahariEiJ_P0058541	RRM_1	PF00076.22	1.3e-87	4	5
MGP_PahariEiJ_P0058541	RRM_1	PF00076.22	1.3e-87	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0058549	-	391	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058548	-	1956	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058545	-	1413	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058544	-	600	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058547	-	477	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058546	-	611	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058541	-	4030	-	MGP_PahariEiJ_P0058541	952 (aa)	-	-
MGP_PahariEiJ_T0058543	-	3920	-	MGP_PahariEiJ_P0058543	870 (aa)	-	-
MGP_PahariEiJ_T0058542	-	461	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058550	-	360	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0024238	Rbm19	70	34.667	MGP_PahariEiJ_G0019749	Pabpc1	58	34.667
MGP_PahariEiJ_G0024238	Rbm19	75	36.066	MGP_PahariEiJ_G0026071	Pabpc1l	60	36.066
MGP_PahariEiJ_G0024238	Rbm19	70	34.667	MGP_PahariEiJ_G0018950	Pabpc2	59	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024238	Rbm19	100	81.696	ENSG00000122965	RBM19	98	85.185	Homo_sapiens
MGP_PahariEiJ_G0024238	Rbm19	99	59.395	ENSAPOG00000010507	rbm19	99	58.991	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024238	Rbm19	100	77.113	ENSAMEG00000008544	RBM19	100	76.955	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024238	Rbm19	99	57.758	ENSACIG00000017780	rbm19	99	59.724	Amphilophus_citrinellus
MGP_PahariEiJ_G0024238	Rbm19	99	59.563	ENSAOCG00000008554	rbm19	99	59.601	Amphiprion_ocellaris
MGP_PahariEiJ_G0024238	Rbm19	99	57.500	ENSAPEG00000022381	rbm19	96	57.856	Amphiprion_percula
MGP_PahariEiJ_G0024238	Rbm19	99	57.529	ENSATEG00000007000	rbm19	99	58.755	Anabas_testudineus
MGP_PahariEiJ_G0024238	Rbm19	98	62.022	ENSAPLG00000015319	RBM19	99	63.515	Anas_platyrhynchos
MGP_PahariEiJ_G0024238	Rbm19	99	66.531	ENSACAG00000005065	RBM19	99	65.723	Anolis_carolinensis
MGP_PahariEiJ_G0024238	Rbm19	100	80.849	ENSANAG00000024136	RBM19	100	80.849	Aotus_nancymaae
MGP_PahariEiJ_G0024238	Rbm19	99	57.456	ENSACLG00000001399	rbm19	99	57.083	Astatotilapia_calliptera
MGP_PahariEiJ_G0024238	Rbm19	87	61.264	ENSAMXG00000017073	rbm19	92	60.778	Astyanax_mexicanus
MGP_PahariEiJ_G0024238	Rbm19	100	79.917	ENSBTAG00000031824	RBM19	100	80.309	Bos_taurus
MGP_PahariEiJ_G0024238	Rbm19	83	42.553	WBGene00004315	rbd-1	99	43.557	Caenorhabditis_elegans
MGP_PahariEiJ_G0024238	Rbm19	100	80.642	ENSCJAG00000009798	RBM19	100	80.745	Callithrix_jacchus
MGP_PahariEiJ_G0024238	Rbm19	100	78.579	ENSCAFG00000009146	RBM19	99	79.317	Canis_familiaris
MGP_PahariEiJ_G0024238	Rbm19	100	78.682	ENSCAFG00020017862	RBM19	99	79.421	Canis_lupus_dingo
MGP_PahariEiJ_G0024238	Rbm19	100	79.691	ENSCHIG00000014917	RBM19	100	80.622	Capra_hircus
MGP_PahariEiJ_G0024238	Rbm19	99	78.805	ENSTSYG00000007207	RBM19	96	80.510	Carlito_syrichta
MGP_PahariEiJ_G0024238	Rbm19	99	79.517	ENSCAPG00000006869	RBM19	99	79.727	Cavia_aperea
MGP_PahariEiJ_G0024238	Rbm19	100	79.917	ENSCPOG00000026629	RBM19	100	80.372	Cavia_porcellus
MGP_PahariEiJ_G0024238	Rbm19	92	73.039	ENSCCAG00000026637	-	99	72.393	Cebus_capucinus
MGP_PahariEiJ_G0024238	Rbm19	100	80.849	ENSCCAG00000021665	-	100	80.849	Cebus_capucinus
MGP_PahariEiJ_G0024238	Rbm19	99	81.027	ENSCATG00000035841	RBM19	100	81.257	Cercocebus_atys
MGP_PahariEiJ_G0024238	Rbm19	100	80.473	ENSCLAG00000009965	RBM19	100	81.192	Chinchilla_lanigera
MGP_PahariEiJ_G0024238	Rbm19	100	77.602	ENSCSAG00000002352	RBM19	96	77.822	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024238	Rbm19	99	67.284	ENSCPBG00000011990	RBM19	100	67.967	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024238	Rbm19	75	50.235	ENSCING00000023076	-	93	49.765	Ciona_intestinalis
MGP_PahariEiJ_G0024238	Rbm19	100	81.075	ENSCANG00000035927	RBM19	100	81.179	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024238	Rbm19	100	90.596	ENSCGRG00001000323	Rbm19	100	90.805	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024238	Rbm19	100	90.596	ENSCGRG00000010371	Rbm19	100	90.805	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024238	Rbm19	99	58.290	ENSCSEG00000017436	rbm19	97	63.910	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024238	Rbm19	99	57.652	ENSCVAG00000000300	rbm19	99	58.498	Cyprinodon_variegatus
MGP_PahariEiJ_G0024238	Rbm19	99	57.803	ENSDARG00000042590	rbm19	100	57.684	Danio_rerio
MGP_PahariEiJ_G0024238	Rbm19	99	78.056	ENSDNOG00000024534	RBM19	96	78.497	Dasypus_novemcinctus
MGP_PahariEiJ_G0024238	Rbm19	99	76.518	ENSDORG00000008549	Rbm19	100	77.014	Dipodomys_ordii
MGP_PahariEiJ_G0024238	Rbm19	66	42.945	FBgn0036018	CG3335	71	41.654	Drosophila_melanogaster
MGP_PahariEiJ_G0024238	Rbm19	65	95.652	ENSETEG00000016887	-	59	95.652	Echinops_telfairi
MGP_PahariEiJ_G0024238	Rbm19	94	45.933	ENSEBUG00000008521	-	99	45.745	Eptatretus_burgeri
MGP_PahariEiJ_G0024238	Rbm19	100	80.558	ENSEASG00005009452	RBM19	100	81.179	Equus_asinus_asinus
MGP_PahariEiJ_G0024238	Rbm19	100	80.702	ENSECAG00000023716	RBM19	100	81.321	Equus_caballus
MGP_PahariEiJ_G0024238	Rbm19	99	58.908	ENSELUG00000012561	rbm19	99	58.582	Esox_lucius
MGP_PahariEiJ_G0024238	Rbm19	100	78.505	ENSFCAG00000002962	RBM19	99	78.756	Felis_catus
MGP_PahariEiJ_G0024238	Rbm19	98	63.684	ENSFALG00000007768	RBM19	99	63.163	Ficedula_albicollis
MGP_PahariEiJ_G0024238	Rbm19	100	79.834	ENSFDAG00000004629	RBM19	100	80.561	Fukomys_damarensis
MGP_PahariEiJ_G0024238	Rbm19	99	58.169	ENSFHEG00000012578	rbm19	99	57.497	Fundulus_heteroclitus
MGP_PahariEiJ_G0024238	Rbm19	99	55.846	ENSGMOG00000013120	rbm19	100	57.128	Gadus_morhua
MGP_PahariEiJ_G0024238	Rbm19	99	64.892	ENSGALG00000008289	RBM19	99	65.337	Gallus_gallus
MGP_PahariEiJ_G0024238	Rbm19	99	58.281	ENSGAFG00000012337	rbm19	99	57.950	Gambusia_affinis
MGP_PahariEiJ_G0024238	Rbm19	99	57.644	ENSGACG00000009462	rbm19	100	57.745	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024238	Rbm19	62	73.154	ENSGAGG00000019457	RBM19	100	73.322	Gopherus_agassizii
MGP_PahariEiJ_G0024238	Rbm19	100	81.903	ENSGGOG00000007371	RBM19	100	82.006	Gorilla_gorilla
MGP_PahariEiJ_G0024238	Rbm19	99	58.646	ENSHBUG00000009047	rbm19	99	58.664	Haplochromis_burtoni
MGP_PahariEiJ_G0024238	Rbm19	100	80.419	ENSHGLG00000010899	RBM19	100	80.524	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024238	Rbm19	100	80.208	ENSHGLG00100017936	RBM19	100	80.312	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024238	Rbm19	99	60.332	ENSHCOG00000016446	rbm19	99	59.502	Hippocampus_comes
MGP_PahariEiJ_G0024238	Rbm19	99	59.044	ENSIPUG00000023849	rbm19	99	57.944	Ictalurus_punctatus
MGP_PahariEiJ_G0024238	Rbm19	99	60.419	ENSKMAG00000014807	rbm19	99	60.733	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024238	Rbm19	99	58.115	ENSLBEG00000012897	rbm19	99	57.143	Labrus_bergylta
MGP_PahariEiJ_G0024238	Rbm19	74	60.000	ENSLACG00000012030	RBM19	93	60.905	Latimeria_chalumnae
MGP_PahariEiJ_G0024238	Rbm19	99	62.137	ENSLOCG00000008341	rbm19	100	62.293	Lepisosteus_oculatus
MGP_PahariEiJ_G0024238	Rbm19	97	78.689	ENSLAFG00000004187	RBM19	100	79.132	Loxodonta_africana
MGP_PahariEiJ_G0024238	Rbm19	100	81.489	ENSMFAG00000046091	RBM19	100	78.180	Macaca_fascicularis
MGP_PahariEiJ_G0024238	Rbm19	100	81.593	ENSMMUG00000010496	RBM19	100	81.696	Macaca_mulatta
MGP_PahariEiJ_G0024238	Rbm19	96	80.638	ENSMNEG00000028452	RBM19	99	80.756	Macaca_nemestrina
MGP_PahariEiJ_G0024238	Rbm19	100	78.909	ENSMLEG00000034550	RBM19	100	79.137	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024238	Rbm19	99	60.960	ENSMAMG00000014397	rbm19	99	60.565	Mastacembelus_armatus
MGP_PahariEiJ_G0024238	Rbm19	99	61.019	ENSMZEG00005016607	rbm19	99	60.334	Maylandia_zebra
MGP_PahariEiJ_G0024238	Rbm19	98	54.671	ENSMGAG00000010087	RBM19	99	55.684	Meleagris_gallopavo
MGP_PahariEiJ_G0024238	Rbm19	100	90.481	ENSMAUG00000019290	Rbm19	100	91.109	Mesocricetus_auratus
MGP_PahariEiJ_G0024238	Rbm19	100	82.573	ENSMICG00000014423	RBM19	100	83.247	Microcebus_murinus
MGP_PahariEiJ_G0024238	Rbm19	99	56.889	ENSMMOG00000017839	rbm19	99	56.450	Mola_mola
MGP_PahariEiJ_G0024238	Rbm19	99	72.698	ENSMODG00000003597	RBM19	99	73.684	Monodelphis_domestica
MGP_PahariEiJ_G0024238	Rbm19	99	58.273	ENSMALG00000012647	rbm19	99	58.489	Monopterus_albus
MGP_PahariEiJ_G0024238	Rbm19	100	96.331	MGP_CAROLIEiJ_G0027656	Rbm19	100	96.331	Mus_caroli
MGP_PahariEiJ_G0024238	Rbm19	100	96.218	ENSMUSG00000029594	Rbm19	100	96.218	Mus_musculus
MGP_PahariEiJ_G0024238	Rbm19	100	95.698	MGP_SPRETEiJ_G0028656	Rbm19	100	95.698	Mus_spretus
MGP_PahariEiJ_G0024238	Rbm19	100	78.763	ENSMPUG00000002694	RBM19	99	79.485	Mustela_putorius_furo
MGP_PahariEiJ_G0024238	Rbm19	100	81.288	ENSMLUG00000015075	RBM19	100	80.982	Myotis_lucifugus
MGP_PahariEiJ_G0024238	Rbm19	99	85.952	ENSNGAG00000009076	Rbm19	99	86.472	Nannospalax_galili
MGP_PahariEiJ_G0024238	Rbm19	99	59.623	ENSNBRG00000005913	rbm19	99	59.644	Neolamprologus_brichardi
MGP_PahariEiJ_G0024238	Rbm19	100	81.903	ENSNLEG00000000190	RBM19	100	81.903	Nomascus_leucogenys
MGP_PahariEiJ_G0024238	Rbm19	92	68.789	ENSMEUG00000004045	RBM19	92	68.634	Notamacropus_eugenii
MGP_PahariEiJ_G0024238	Rbm19	100	79.564	ENSOPRG00000012064	RBM19	100	79.668	Ochotona_princeps
MGP_PahariEiJ_G0024238	Rbm19	100	76.939	ENSODEG00000012977	RBM19	100	78.115	Octodon_degus
MGP_PahariEiJ_G0024238	Rbm19	100	61.019	ENSONIG00000013576	rbm19	100	59.653	Oreochromis_niloticus
MGP_PahariEiJ_G0024238	Rbm19	99	77.534	ENSOCUG00000009398	RBM19	99	78.161	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024238	Rbm19	99	58.455	ENSORLG00000008077	rbm19	99	58.698	Oryzias_latipes
MGP_PahariEiJ_G0024238	Rbm19	99	57.336	ENSORLG00020013187	rbm19	99	58.023	Oryzias_latipes_hni
MGP_PahariEiJ_G0024238	Rbm19	99	58.603	ENSORLG00015001774	rbm19	99	58.412	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024238	Rbm19	99	59.039	ENSOMEG00000003334	rbm19	99	58.934	Oryzias_melastigma
MGP_PahariEiJ_G0024238	Rbm19	97	81.882	ENSOGAG00000000602	RBM19	100	81.301	Otolemur_garnettii
MGP_PahariEiJ_G0024238	Rbm19	100	79.501	ENSOARG00000006827	RBM19	100	80.622	Ovis_aries
MGP_PahariEiJ_G0024238	Rbm19	100	82.006	ENSPPAG00000043712	RBM19	100	82.213	Pan_paniscus
MGP_PahariEiJ_G0024238	Rbm19	100	78.401	ENSPPRG00000023027	RBM19	99	78.920	Panthera_pardus
MGP_PahariEiJ_G0024238	Rbm19	100	71.384	ENSPTIG00000011096	RBM19	100	71.679	Panthera_tigris_altaica
MGP_PahariEiJ_G0024238	Rbm19	100	81.799	ENSPTRG00000005494	RBM19	100	82.006	Pan_troglodytes
MGP_PahariEiJ_G0024238	Rbm19	100	81.263	ENSPANG00000004795	RBM19	99	78.610	Papio_anubis
MGP_PahariEiJ_G0024238	Rbm19	99	58.290	ENSPKIG00000017095	rbm19	99	58.098	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024238	Rbm19	93	64.910	ENSPSIG00000008191	RBM19	99	65.124	Pelodiscus_sinensis
MGP_PahariEiJ_G0024238	Rbm19	84	61.184	ENSPMGG00000019087	rbm19	100	60.185	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024238	Rbm19	100	90.776	ENSPEMG00000018058	Rbm19	100	90.776	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024238	Rbm19	99	73.810	ENSPCIG00000028861	RBM19	100	73.832	Phascolarctos_cinereus
MGP_PahariEiJ_G0024238	Rbm19	99	58.159	ENSPFOG00000015300	rbm19	99	58.142	Poecilia_formosa
MGP_PahariEiJ_G0024238	Rbm19	99	58.805	ENSPLAG00000000059	rbm19	99	58.455	Poecilia_latipinna
MGP_PahariEiJ_G0024238	Rbm19	99	57.592	ENSPMEG00000018585	rbm19	97	63.651	Poecilia_mexicana
MGP_PahariEiJ_G0024238	Rbm19	99	58.934	ENSPREG00000000978	rbm19	99	58.982	Poecilia_reticulata
MGP_PahariEiJ_G0024238	Rbm19	100	78.904	ENSPPYG00000004993	RBM19	100	79.007	Pongo_abelii
MGP_PahariEiJ_G0024238	Rbm19	60	77.872	ENSPCAG00000005063	-	59	77.872	Procavia_capensis
MGP_PahariEiJ_G0024238	Rbm19	100	82.298	ENSPCOG00000016190	RBM19	100	82.176	Propithecus_coquereli
MGP_PahariEiJ_G0024238	Rbm19	100	77.938	ENSPVAG00000011618	RBM19	99	78.660	Pteropus_vampyrus
MGP_PahariEiJ_G0024238	Rbm19	99	58.402	ENSPNYG00000017434	rbm19	99	58.969	Pundamilia_nyererei
MGP_PahariEiJ_G0024238	Rbm19	99	58.446	ENSPNAG00000012069	rbm19	99	58.621	Pygocentrus_nattereri
MGP_PahariEiJ_G0024238	Rbm19	100	94.031	ENSRNOG00000001397	Rbm19	100	94.031	Rattus_norvegicus
MGP_PahariEiJ_G0024238	Rbm19	100	80.765	ENSRBIG00000041419	RBM19	100	79.835	Rhinopithecus_bieti
MGP_PahariEiJ_G0024238	Rbm19	100	80.558	ENSRROG00000031938	RBM19	100	81.179	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024238	Rbm19	70	38.912	YPR112C	-	77	37.833	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0024238	Rbm19	96	71.462	ENSSBOG00000022679	-	99	70.000	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024238	Rbm19	100	78.468	ENSSBOG00000021434	-	100	78.594	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024238	Rbm19	99	72.976	ENSSHAG00000012256	RBM19	100	73.145	Sarcophilus_harrisii
MGP_PahariEiJ_G0024238	Rbm19	99	57.275	ENSSFOG00015005124	rbm19	99	58.247	Scleropages_formosus
MGP_PahariEiJ_G0024238	Rbm19	99	59.378	ENSSMAG00000011828	rbm19	99	59.333	Scophthalmus_maximus
MGP_PahariEiJ_G0024238	Rbm19	99	60.083	ENSSDUG00000013544	rbm19	99	59.499	Seriola_dumerili
MGP_PahariEiJ_G0024238	Rbm19	87	64.955	ENSSLDG00000025413	rbm19	96	63.079	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024238	Rbm19	61	72.165	ENSSPUG00000011064	RBM19	98	72.165	Sphenodon_punctatus
MGP_PahariEiJ_G0024238	Rbm19	99	56.178	ENSSPAG00000018685	rbm19	98	57.281	Stegastes_partitus
MGP_PahariEiJ_G0024238	Rbm19	100	80.062	ENSSSCG00000009868	RBM19	100	80.582	Sus_scrofa
MGP_PahariEiJ_G0024238	Rbm19	99	65.676	ENSTGUG00000009017	RBM19	100	65.266	Taeniopygia_guttata
MGP_PahariEiJ_G0024238	Rbm19	99	59.271	ENSTRUG00000016032	rbm19	99	59.544	Takifugu_rubripes
MGP_PahariEiJ_G0024238	Rbm19	71	93.443	ENSTBEG00000000703	RBM19	73	93.443	Tupaia_belangeri
MGP_PahariEiJ_G0024238	Rbm19	84	76.677	ENSTTRG00000003987	RBM19	85	76.677	Tursiops_truncatus
MGP_PahariEiJ_G0024238	Rbm19	99	79.101	ENSUAMG00000002076	RBM19	99	79.458	Ursus_americanus
MGP_PahariEiJ_G0024238	Rbm19	99	79.271	ENSUMAG00000010816	RBM19	100	79.626	Ursus_maritimus
MGP_PahariEiJ_G0024238	Rbm19	100	79.421	ENSVVUG00000007886	RBM19	99	79.214	Vulpes_vulpes
MGP_PahariEiJ_G0024238	Rbm19	99	61.331	ENSXETG00000017668	rbm19	99	62.055	Xenopus_tropicalis
MGP_PahariEiJ_G0024238	Rbm19	99	57.557	ENSXCOG00000016995	rbm19	69	63.746	Xiphophorus_couchianus
MGP_PahariEiJ_G0024238	Rbm19	99	58.743	ENSXMAG00000007641	rbm19	99	57.889	Xiphophorus_maculatus