EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024300 (Gene tree)
Gene ID: 110312745
Gene Symbol: Setd1b
Alias: KMT2G
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 25809 bases
Position: chr23:13111859-13137667
Accession: 110312745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0058891	RRM_1	PF00076.22	2.8e-10	1	1
MGP_PahariEiJ_P0058892	RRM_1	PF00076.22	2.8e-10	1	1
MGP_PahariEiJ_P0058893	RRM_1	PF00076.22	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0058893	-	7396	-	MGP_PahariEiJ_P0058893	1990 (aa)	-	UPI000A30758B
MGP_PahariEiJ_T0058892	-	7661	-	MGP_PahariEiJ_P0058892	1990 (aa)	-	UPI000A30758B
MGP_PahariEiJ_T0058891	-	8816	XM_021186588	MGP_PahariEiJ_P0058891	1990 (aa)	XP_021042247	UPI000A30758B
MGP_PahariEiJ_T0058890	-	3446	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058895	-	647	-	MGP_PahariEiJ_P0058895	87 (aa)	-	UPI00021CF6B2
MGP_PahariEiJ_T0058894	-	2093	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024300	Setd1b	61	90.690	ENSCAFG00020016619	SETD1B	71	89.085	Canis_lupus_dingo
MGP_PahariEiJ_G0024300	Setd1b	52	95.053	ENSCHIG00000013406	SETD1B	55	95.070	Capra_hircus
MGP_PahariEiJ_G0024300	Setd1b	76	94.097	ENSTSYG00000033777	SETD1B	72	91.379	Carlito_syrichta
MGP_PahariEiJ_G0024300	Setd1b	53	90.744	ENSCATG00000035803	SETD1B	50	96.831	Cercocebus_atys
MGP_PahariEiJ_G0024300	Setd1b	90	90.923	ENSCLAG00000013200	SETD1B	91	96.838	Chinchilla_lanigera
MGP_PahariEiJ_G0024300	Setd1b	67	88.772	ENSCANG00000023445	SETD1B	73	96.763	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024300	Setd1b	62	91.626	ENSCGRG00001013241	Setd1b	62	91.948	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024300	Setd1b	81	97.765	ENSCGRG00000018075	Setd1b	96	97.765	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024300	Setd1b	58	88.191	ENSECAG00000006549	SETD1B	58	87.781	Equus_caballus
MGP_PahariEiJ_G0024300	Setd1b	51	89.922	ENSFCAG00000013185	SETD1B	53	89.746	Felis_catus
MGP_PahariEiJ_G0024300	Setd1b	60	90.970	ENSFDAG00000015120	SETD1B	62	90.317	Fukomys_damarensis
MGP_PahariEiJ_G0024300	Setd1b	61	91.914	ENSHGLG00000012063	SETD1B	70	91.967	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024300	Setd1b	71	83.982	ENSLAFG00000026518	SETD1B	72	93.730	Loxodonta_africana
MGP_PahariEiJ_G0024300	Setd1b	57	84.312	ENSMNEG00000014228	SETD1B	57	83.363	Macaca_nemestrina
MGP_PahariEiJ_G0024300	Setd1b	100	97.642	MGP_CAROLIEiJ_G0027720	Setd1b	100	97.642	Mus_caroli
MGP_PahariEiJ_G0024300	Setd1b	100	97.445	ENSMUSG00000038384	Setd1b	100	97.445	Mus_musculus
MGP_PahariEiJ_G0024300	Setd1b	96	78.354	ENSOCUG00000017708	SETD1B	76	91.126	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024300	Setd1b	99	84.639	ENSOGAG00000034809	SETD1B	52	91.292	Otolemur_garnettii
MGP_PahariEiJ_G0024300	Setd1b	65	96.842	ENSPPRG00000021041	SETD1B	79	92.877	Panthera_pardus
MGP_PahariEiJ_G0024300	Setd1b	62	90.457	ENSRNOG00000001337	Setd1b	62	89.735	Rattus_norvegicus
MGP_PahariEiJ_G0024300	Setd1b	67	89.381	ENSSBOG00000033322	SETD1B	76	88.142	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024300	Setd1b	67	62.319	ENSSFOG00015004814	SETD1B	61	86.622	Scleropages_formosus
MGP_PahariEiJ_G0024300	Setd1b	51	92.958	ENSSSCG00000009806	SETD1B	54	90.493	Sus_scrofa
MGP_PahariEiJ_G0024300	Setd1b	84	54.600	ENSTRUG00000009533	setd1ba	57	84.281	Takifugu_rubripes