EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024317 (Gene tree)
Gene ID: 110313006
Gene Symbol: Denr
Alias: 1500003K04Rik
Full Name: density regulated re-initiation and release factor
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 21329 bases
Position: chr23:13844259-13865587
Accession: 110313006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0058994	SUI1	PF01253.22	1.1e-16	1	1
MGP_PahariEiJ_P0058998	SUI1	PF01253.22	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0058996	-	3982	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058997	-	474	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058994	-	2189	-	MGP_PahariEiJ_P0058994	198 (aa)	XP_021042666	UPI000A307358
MGP_PahariEiJ_T0058995	-	344	-	-	- (aa)	-	-
MGP_PahariEiJ_T0058998	-	788	-	MGP_PahariEiJ_P0058998	182 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSG00000139726	DENR	100	96.465	Homo_sapiens
MGP_PahariEiJ_G0024317	Denr	100	77.838	ENSAPOG00000021065	denr	100	76.768	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024317	Denr	100	92.118	ENSAMEG00000014851	DENR	99	92.118	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024317	Denr	91	82.418	ENSACIG00000007705	denr	100	76.884	Amphilophus_citrinellus
MGP_PahariEiJ_G0024317	Denr	100	77.838	ENSAOCG00000004767	denr	100	76.768	Amphiprion_ocellaris
MGP_PahariEiJ_G0024317	Denr	100	78.378	ENSAPEG00000006323	denr	100	77.273	Amphiprion_percula
MGP_PahariEiJ_G0024317	Denr	87	84.568	ENSATEG00000004198	denr	91	82.123	Anabas_testudineus
MGP_PahariEiJ_G0024317	Denr	100	89.394	ENSAPLG00000003750	DENR	99	89.394	Anas_platyrhynchos
MGP_PahariEiJ_G0024317	Denr	97	91.192	ENSACAG00000016012	DENR	98	91.192	Anolis_carolinensis
MGP_PahariEiJ_G0024317	Denr	100	96.970	ENSANAG00000033479	-	100	96.970	Aotus_nancymaae
MGP_PahariEiJ_G0024317	Denr	100	74.747	ENSANAG00000011753	-	99	74.747	Aotus_nancymaae
MGP_PahariEiJ_G0024317	Denr	100	76.768	ENSACLG00000024786	denr	100	76.768	Astatotilapia_calliptera
MGP_PahariEiJ_G0024317	Denr	91	79.459	ENSAMXG00000019387	denr	92	83.784	Astyanax_mexicanus
MGP_PahariEiJ_G0024317	Denr	100	93.939	ENSBTAG00000049723	DENR	100	93.939	Bos_taurus
MGP_PahariEiJ_G0024317	Denr	100	93.939	ENSBTAG00000032433	DENR	100	93.939	Bos_taurus
MGP_PahariEiJ_G0024317	Denr	87	44.767	WBGene00012932	Y47D3A.21	89	45.556	Caenorhabditis_elegans
MGP_PahariEiJ_G0024317	Denr	85	84.516	ENSCJAG00000042372	-	95	84.516	Callithrix_jacchus
MGP_PahariEiJ_G0024317	Denr	100	96.970	ENSCJAG00000020488	DENR	100	96.970	Callithrix_jacchus
MGP_PahariEiJ_G0024317	Denr	100	94.949	ENSCAFG00000032380	DENR	72	94.949	Canis_familiaris
MGP_PahariEiJ_G0024317	Denr	100	94.949	ENSCAFG00020016334	DENR	100	94.949	Canis_lupus_dingo
MGP_PahariEiJ_G0024317	Denr	100	93.939	ENSCHIG00000025489	DENR	100	93.939	Capra_hircus
MGP_PahariEiJ_G0024317	Denr	100	95.455	ENSTSYG00000028003	-	100	95.455	Carlito_syrichta
MGP_PahariEiJ_G0024317	Denr	100	92.424	ENSTSYG00000035451	-	100	92.424	Carlito_syrichta
MGP_PahariEiJ_G0024317	Denr	82	94.444	ENSCAPG00000002873	DENR	100	94.444	Cavia_aperea
MGP_PahariEiJ_G0024317	Denr	100	94.949	ENSCPOG00000031356	DENR	100	94.949	Cavia_porcellus
MGP_PahariEiJ_G0024317	Denr	97	82.486	ENSCCAG00000033248	-	100	80.203	Cebus_capucinus
MGP_PahariEiJ_G0024317	Denr	100	81.313	ENSCCAG00000026516	-	100	79.293	Cebus_capucinus
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSCATG00000032375	-	100	96.465	Cercocebus_atys
MGP_PahariEiJ_G0024317	Denr	100	92.424	ENSCLAG00000014586	DENR	100	92.424	Chinchilla_lanigera
MGP_PahariEiJ_G0024317	Denr	77	97.368	ENSCSAG00000002095	DENR	100	97.368	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024317	Denr	100	78.894	ENSCHOG00000011505	DENR	100	78.894	Choloepus_hoffmanni
MGP_PahariEiJ_G0024317	Denr	100	90.909	ENSCPBG00000026018	DENR	100	90.909	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024317	Denr	94	49.711	ENSCING00000022096	-	93	49.735	Ciona_intestinalis
MGP_PahariEiJ_G0024317	Denr	93	48.925	ENSCSAVG00000008066	-	95	46.392	Ciona_savignyi
MGP_PahariEiJ_G0024317	Denr	100	93.939	ENSCGRG00001022427	Denr	100	93.939	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024317	Denr	100	93.939	ENSCGRG00000014376	Denr	100	93.939	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024317	Denr	100	77.612	ENSCSEG00000012090	denr	100	77.612	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024317	Denr	100	79.602	ENSCVAG00000006732	denr	100	78.788	Cyprinodon_variegatus
MGP_PahariEiJ_G0024317	Denr	91	78.646	ENSDARG00000037229	denr	92	80.208	Danio_rerio
MGP_PahariEiJ_G0024317	Denr	100	76.923	ENSDNOG00000001447	DENR	100	98.026	Dasypus_novemcinctus
MGP_PahariEiJ_G0024317	Denr	100	92.424	ENSDNOG00000036413	-	100	92.424	Dasypus_novemcinctus
MGP_PahariEiJ_G0024317	Denr	87	50.289	FBgn0030802	DENR	87	50.289	Drosophila_melanogaster
MGP_PahariEiJ_G0024317	Denr	100	75.377	ENSETEG00000013029	DENR	100	75.377	Echinops_telfairi
MGP_PahariEiJ_G0024317	Denr	100	94.444	ENSEASG00005012513	DENR	100	94.444	Equus_asinus_asinus
MGP_PahariEiJ_G0024317	Denr	100	94.444	ENSECAG00000021824	DENR	72	94.444	Equus_caballus
MGP_PahariEiJ_G0024317	Denr	97	78.571	ENSELUG00000002656	denr	97	78.571	Esox_lucius
MGP_PahariEiJ_G0024317	Denr	100	93.939	ENSFCAG00000006126	DENR	100	93.939	Felis_catus
MGP_PahariEiJ_G0024317	Denr	100	86.000	ENSFALG00000009235	DENR	100	88.500	Ficedula_albicollis
MGP_PahariEiJ_G0024317	Denr	100	95.055	ENSFDAG00000016899	-	100	94.949	Fukomys_damarensis
MGP_PahariEiJ_G0024317	Denr	100	74.242	ENSFDAG00000018403	-	100	74.242	Fukomys_damarensis
MGP_PahariEiJ_G0024317	Denr	88	87.079	ENSFHEG00000007729	denr	90	87.079	Fundulus_heteroclitus
MGP_PahariEiJ_G0024317	Denr	97	77.436	ENSGMOG00000017892	denr	97	77.436	Gadus_morhua
MGP_PahariEiJ_G0024317	Denr	100	89.394	ENSGALG00000003795	DENR	100	89.394	Gallus_gallus
MGP_PahariEiJ_G0024317	Denr	100	77.387	ENSGAFG00000004297	denr	100	77.387	Gambusia_affinis
MGP_PahariEiJ_G0024317	Denr	100	76.119	ENSGACG00000015614	denr	100	76.617	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024317	Denr	100	91.414	ENSGAGG00000023819	DENR	100	91.414	Gopherus_agassizii
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSGGOG00000005562	DENR	100	96.465	Gorilla_gorilla
MGP_PahariEiJ_G0024317	Denr	100	78.109	ENSHBUG00000011606	denr	100	78.109	Haplochromis_burtoni
MGP_PahariEiJ_G0024317	Denr	100	95.055	ENSHGLG00000009606	DENR	100	94.949	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024317	Denr	100	95.055	ENSHGLG00100019201	DENR	100	94.949	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024317	Denr	88	81.356	ENSHCOG00000003310	denr	92	81.356	Hippocampus_comes
MGP_PahariEiJ_G0024317	Denr	100	76.667	ENSIPUG00000016199	denr	100	76.667	Ictalurus_punctatus
MGP_PahariEiJ_G0024317	Denr	100	95.960	ENSSTOG00000014128	DENR	100	95.960	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024317	Denr	100	89.394	ENSJJAG00000008721	-	100	89.394	Jaculus_jaculus
MGP_PahariEiJ_G0024317	Denr	85	90.446	ENSJJAG00000013822	-	92	90.446	Jaculus_jaculus
MGP_PahariEiJ_G0024317	Denr	100	95.604	ENSJJAG00000012558	-	100	95.455	Jaculus_jaculus
MGP_PahariEiJ_G0024317	Denr	96	79.688	ENSKMAG00000008452	denr	99	80.208	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024317	Denr	88	85.393	ENSLBEG00000021674	denr	89	85.393	Labrus_bergylta
MGP_PahariEiJ_G0024317	Denr	65	86.822	ENSLACG00000022178	DENR	96	86.822	Latimeria_chalumnae
MGP_PahariEiJ_G0024317	Denr	97	83.938	ENSLOCG00000005501	denr	97	84.456	Lepisosteus_oculatus
MGP_PahariEiJ_G0024317	Denr	100	92.000	ENSLAFG00000031728	DENR	100	92.000	Loxodonta_africana
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSMFAG00000038312	DENR	100	96.465	Macaca_fascicularis
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSMMUG00000046801	DENR	100	96.465	Macaca_mulatta
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSMNEG00000034844	-	100	96.465	Macaca_nemestrina
MGP_PahariEiJ_G0024317	Denr	86	74.522	ENSMNEG00000030944	-	99	70.558	Macaca_nemestrina
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSMLEG00000032214	DENR	100	96.465	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024317	Denr	91	81.768	ENSMAMG00000011386	denr	100	76.768	Mastacembelus_armatus
MGP_PahariEiJ_G0024317	Denr	100	76.768	ENSMZEG00005007982	denr	100	76.768	Maylandia_zebra
MGP_PahariEiJ_G0024317	Denr	100	89.394	ENSMGAG00000003720	DENR	99	89.394	Meleagris_gallopavo
MGP_PahariEiJ_G0024317	Denr	100	82.323	ENSMAUG00000020940	Denr	100	82.323	Mesocricetus_auratus
MGP_PahariEiJ_G0024317	Denr	100	95.455	ENSMICG00000046263	DENR	100	95.455	Microcebus_murinus
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSMOCG00000019231	Denr	100	96.465	Microtus_ochrogaster
MGP_PahariEiJ_G0024317	Denr	80	86.164	ENSMMOG00000009357	denr	87	86.164	Mola_mola
MGP_PahariEiJ_G0024317	Denr	100	91.919	ENSMODG00000012302	DENR	100	91.919	Monodelphis_domestica
MGP_PahariEiJ_G0024317	Denr	91	85.083	ENSMALG00000018416	denr	100	79.293	Monopterus_albus
MGP_PahariEiJ_G0024317	Denr	100	98.990	MGP_CAROLIEiJ_G0027737	Denr	100	98.990	Mus_caroli
MGP_PahariEiJ_G0024317	Denr	100	98.990	ENSMUSG00000023106	Denr	100	98.990	Mus_musculus
MGP_PahariEiJ_G0024317	Denr	100	98.990	MGP_SPRETEiJ_G0028735	Denr	100	98.990	Mus_spretus
MGP_PahariEiJ_G0024317	Denr	100	93.500	ENSMPUG00000001826	DENR	73	93.500	Mustela_putorius_furo
MGP_PahariEiJ_G0024317	Denr	100	93.000	ENSMLUG00000002088	DENR	100	93.000	Myotis_lucifugus
MGP_PahariEiJ_G0024317	Denr	100	95.455	ENSNGAG00000013775	Denr	100	95.455	Nannospalax_galili
MGP_PahariEiJ_G0024317	Denr	100	79.293	ENSNBRG00000018898	denr	100	79.293	Neolamprologus_brichardi
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSNLEG00000029880	DENR	100	96.465	Nomascus_leucogenys
MGP_PahariEiJ_G0024317	Denr	100	81.313	ENSODEG00000005378	-	100	81.818	Octodon_degus
MGP_PahariEiJ_G0024317	Denr	100	95.055	ENSODEG00000009408	-	97	91.837	Octodon_degus
MGP_PahariEiJ_G0024317	Denr	100	69.192	ENSODEG00000006563	-	100	69.192	Octodon_degus
MGP_PahariEiJ_G0024317	Denr	91	83.152	ENSONIG00000015319	denr	92	83.152	Oreochromis_niloticus
MGP_PahariEiJ_G0024317	Denr	100	91.000	ENSOANG00000011417	-	100	91.000	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0024317	Denr	100	94.949	ENSOCUG00000008150	-	100	94.949	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024317	Denr	96	82.105	ENSOCUG00000027291	-	100	80.526	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024317	Denr	93	79.891	ENSORLG00000001495	denr	96	79.891	Oryzias_latipes
MGP_PahariEiJ_G0024317	Denr	92	81.287	ENSORLG00020015485	denr	96	79.891	Oryzias_latipes_hni
MGP_PahariEiJ_G0024317	Denr	93	79.459	ENSORLG00015002890	denr	96	79.459	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024317	Denr	93	79.891	ENSOMEG00000021836	denr	96	79.891	Oryzias_melastigma
MGP_PahariEiJ_G0024317	Denr	100	95.960	ENSOGAG00000012426	DENR	100	95.960	Otolemur_garnettii
MGP_PahariEiJ_G0024317	Denr	100	91.626	ENSOARG00000008511	DENR	99	91.626	Ovis_aries
MGP_PahariEiJ_G0024317	Denr	100	90.777	ENSPPAG00000031425	DENR	100	90.777	Pan_paniscus
MGP_PahariEiJ_G0024317	Denr	100	62.376	ENSPPRG00000020005	-	100	64.646	Panthera_pardus
MGP_PahariEiJ_G0024317	Denr	100	93.939	ENSPPRG00000009664	-	100	93.939	Panthera_pardus
MGP_PahariEiJ_G0024317	Denr	100	93.434	ENSPTIG00000014761	-	100	93.434	Panthera_tigris_altaica
MGP_PahariEiJ_G0024317	Denr	95	70.500	ENSPTIG00000021643	-	90	80.473	Panthera_tigris_altaica
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSPTRG00000005584	DENR	100	96.465	Pan_troglodytes
MGP_PahariEiJ_G0024317	Denr	82	97.546	ENSPANG00000035364	-	100	97.546	Papio_anubis
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSPANG00000030074	-	100	96.465	Papio_anubis
MGP_PahariEiJ_G0024317	Denr	100	77.778	ENSPKIG00000001107	denr	100	75.377	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024317	Denr	100	90.909	ENSPSIG00000008249	DENR	95	90.909	Pelodiscus_sinensis
MGP_PahariEiJ_G0024317	Denr	79	82.517	ENSPMGG00000017214	denr	61	82.877	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSPEMG00000006521	-	100	96.465	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024317	Denr	91	69.822	ENSPMAG00000008589	denr	91	70.930	Petromyzon_marinus
MGP_PahariEiJ_G0024317	Denr	100	92.424	ENSPCIG00000022523	DENR	100	92.424	Phascolarctos_cinereus
MGP_PahariEiJ_G0024317	Denr	100	80.808	ENSPFOG00000023419	denr	100	80.808	Poecilia_formosa
MGP_PahariEiJ_G0024317	Denr	100	80.808	ENSPLAG00000014807	denr	100	80.808	Poecilia_latipinna
MGP_PahariEiJ_G0024317	Denr	100	75.490	ENSPMEG00000020699	denr	100	75.490	Poecilia_mexicana
MGP_PahariEiJ_G0024317	Denr	100	80.808	ENSPREG00000016795	denr	100	80.808	Poecilia_reticulata
MGP_PahariEiJ_G0024317	Denr	100	88.945	ENSPCAG00000012039	DENR	100	88.945	Procavia_capensis
MGP_PahariEiJ_G0024317	Denr	100	95.960	ENSPCOG00000015933	DENR	100	95.960	Propithecus_coquereli
MGP_PahariEiJ_G0024317	Denr	100	91.960	ENSPVAG00000001291	DENR	100	91.960	Pteropus_vampyrus
MGP_PahariEiJ_G0024317	Denr	100	79.293	ENSPNYG00000003833	denr	100	79.293	Pundamilia_nyererei
MGP_PahariEiJ_G0024317	Denr	91	82.065	ENSPNAG00000021662	denr	92	82.065	Pygocentrus_nattereri
MGP_PahariEiJ_G0024317	Denr	100	92.424	ENSRNOG00000001106	Denr	100	92.424	Rattus_norvegicus
MGP_PahariEiJ_G0024317	Denr	100	76.768	ENSRBIG00000041357	DENR	100	76.263	Rhinopithecus_bieti
MGP_PahariEiJ_G0024317	Denr	100	96.465	ENSRROG00000044446	DENR	100	96.465	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024317	Denr	79	34.177	YJR014W	TMA22	82	33.742	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0024317	Denr	85	94.805	ENSSBOG00000030149	-	87	94.805	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024317	Denr	99	67.403	ENSSBOG00000024171	-	100	66.500	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024317	Denr	100	90.761	ENSSHAG00000012064	DENR	99	90.404	Sarcophilus_harrisii
MGP_PahariEiJ_G0024317	Denr	88	89.143	ENSSFOG00015018494	denr	100	80.808	Scleropages_formosus
MGP_PahariEiJ_G0024317	Denr	88	83.429	ENSSMAG00000010563	denr	96	76.768	Scophthalmus_maximus
MGP_PahariEiJ_G0024317	Denr	100	77.612	ENSSDUG00000023551	denr	100	77.612	Seriola_dumerili
MGP_PahariEiJ_G0024317	Denr	100	77.114	ENSSLDG00000011430	denr	100	77.114	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024317	Denr	79	98.077	ENSSARG00000004446	DENR	100	98.077	Sorex_araneus
MGP_PahariEiJ_G0024317	Denr	100	92.424	ENSSPUG00000012205	DENR	100	92.424	Sphenodon_punctatus
MGP_PahariEiJ_G0024317	Denr	100	78.607	ENSSPAG00000019529	denr	100	78.607	Stegastes_partitus
MGP_PahariEiJ_G0024317	Denr	100	95.455	ENSSSCG00000009788	-	100	95.455	Sus_scrofa
MGP_PahariEiJ_G0024317	Denr	100	83.333	ENSTGUG00000005674	DENR	100	83.333	Taeniopygia_guttata
MGP_PahariEiJ_G0024317	Denr	80	86.792	ENSTRUG00000020621	denr	86	86.792	Takifugu_rubripes
MGP_PahariEiJ_G0024317	Denr	91	83.978	ENSTNIG00000013510	denr	88	86.286	Tetraodon_nigroviridis
MGP_PahariEiJ_G0024317	Denr	100	76.382	ENSTTRG00000015856	DENR	100	76.382	Tursiops_truncatus
MGP_PahariEiJ_G0024317	Denr	100	94.444	ENSUAMG00000003667	-	100	94.444	Ursus_americanus
MGP_PahariEiJ_G0024317	Denr	100	55.276	ENSUAMG00000011200	-	100	55.276	Ursus_americanus
MGP_PahariEiJ_G0024317	Denr	100	94.444	ENSUMAG00000005166	-	100	94.444	Ursus_maritimus
MGP_PahariEiJ_G0024317	Denr	100	55.276	ENSUMAG00000023866	-	100	55.276	Ursus_maritimus
MGP_PahariEiJ_G0024317	Denr	100	72.683	ENSVPAG00000011472	DENR	100	72.683	Vicugna_pacos
MGP_PahariEiJ_G0024317	Denr	100	94.949	ENSVVUG00000028097	DENR	72	94.949	Vulpes_vulpes
MGP_PahariEiJ_G0024317	Denr	100	85.859	ENSXETG00000005791	denr	99	85.859	Xenopus_tropicalis
MGP_PahariEiJ_G0024317	Denr	100	74.747	ENSXCOG00000017611	denr	100	74.747	Xiphophorus_couchianus
MGP_PahariEiJ_G0024317	Denr	100	80.808	ENSXMAG00000019247	denr	100	80.808	Xiphophorus_maculatus