EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024332 (Gene tree)
Gene ID: 110313050
Gene Symbol: Snrnp35
Alias: 6330548G22Rik
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 35
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 6119 bases
Position: chr23:14419141-14425259
Accession: 110313050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0059083	RRM_1	PF00076.22	1.1e-16	1	1
MGP_PahariEiJ_P0059082	RRM_1	PF00076.22	1.3e-16	1	1
MGP_PahariEiJ_P0059084	RRM_1	PF00076.22	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0059083	-	453	-	MGP_PahariEiJ_P0059083	121 (aa)	-	UPI00015AA31A
MGP_PahariEiJ_T0059082	-	1112	XM_021187076	MGP_PahariEiJ_P0059082	244 (aa)	XP_021042735	UPI000A310BC2
MGP_PahariEiJ_T0059084	-	1186	-	MGP_PahariEiJ_P0059084	244 (aa)	-	UPI000A310BC2

Gene Model

Click here to download MGP_PahariEiJ_G0024332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0024332	Snrnp35	57	31.884	MGP_PahariEiJ_G0017224	Hnrnpd	57	31.884
MGP_PahariEiJ_G0024332	Snrnp35	61	48.649	MGP_PahariEiJ_G0012939	Snrnp70	70	46.667
MGP_PahariEiJ_G0024332	Snrnp35	55	36.364	MGP_PahariEiJ_G0031641	Rbmx	71	35.616
MGP_PahariEiJ_G0024332	Snrnp35	55	34.848	MGP_PahariEiJ_G0031463	Rbm3	73	33.333
MGP_PahariEiJ_G0024332	Snrnp35	60	37.500	MGP_PahariEiJ_G0028496	Elavl2	67	35.714
MGP_PahariEiJ_G0024332	Snrnp35	60	34.211	MGP_PahariEiJ_G0026828	-	70	30.000
MGP_PahariEiJ_G0024332	Snrnp35	59	33.803	MGP_PahariEiJ_G0028622	Elavl4	59	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSG00000184209	SNRNP35	91	92.000	Homo_sapiens
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSAMEG00000019650	SNRNP35	91	91.556	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024332	Snrnp35	100	80.165	ENSACIG00000003238	snrnp35	80	81.765	Amphilophus_citrinellus
MGP_PahariEiJ_G0024332	Snrnp35	100	76.860	ENSAOCG00000007701	snrnp35	79	79.412	Amphiprion_ocellaris
MGP_PahariEiJ_G0024332	Snrnp35	100	76.860	ENSAPEG00000023725	snrnp35	82	77.714	Amphiprion_percula
MGP_PahariEiJ_G0024332	Snrnp35	100	77.686	ENSATEG00000021269	snrnp35	88	78.824	Anabas_testudineus
MGP_PahariEiJ_G0024332	Snrnp35	100	90.083	ENSAPLG00000015654	SNRNP35	90	80.717	Anas_platyrhynchos
MGP_PahariEiJ_G0024332	Snrnp35	100	86.777	ENSACAG00000015421	SNRNP35	82	78.802	Anolis_carolinensis
MGP_PahariEiJ_G0024332	Snrnp35	100	94.215	ENSANAG00000025109	SNRNP35	89	89.823	Aotus_nancymaae
MGP_PahariEiJ_G0024332	Snrnp35	100	79.339	ENSACLG00000020890	snrnp35	81	81.176	Astatotilapia_calliptera
MGP_PahariEiJ_G0024332	Snrnp35	100	79.339	ENSACLG00000020994	SNRNP35	81	81.176	Astatotilapia_calliptera
MGP_PahariEiJ_G0024332	Snrnp35	100	76.033	ENSAMXG00000026163	snrnp35	80	79.762	Astyanax_mexicanus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSBTAG00000008060	SNRNP35	91	91.111	Bos_taurus
MGP_PahariEiJ_G0024332	Snrnp35	100	93.388	ENSCJAG00000007131	SNRNP35	90	91.111	Callithrix_jacchus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSCAFG00000007484	SNRNP35	91	89.778	Canis_familiaris
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSCAFG00020015272	-	91	89.778	Canis_lupus_dingo
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSCHIG00000006364	SNRNP35	91	91.111	Capra_hircus
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSTSYG00000034104	SNRNP35	91	92.444	Carlito_syrichta
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSCPOG00000002548	SNRNP35	91	89.333	Cavia_porcellus
MGP_PahariEiJ_G0024332	Snrnp35	100	94.215	ENSCCAG00000001685	SNRNP35	90	89.823	Cebus_capucinus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSCATG00000021946	SNRNP35	91	91.111	Cercocebus_atys
MGP_PahariEiJ_G0024332	Snrnp35	100	94.215	ENSCLAG00000010232	SNRNP35	91	90.222	Chinchilla_lanigera
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSCSAG00000018950	SNRNP35	91	91.111	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSCHOG00000006263	SNRNP35	91	92.444	Choloepus_hoffmanni
MGP_PahariEiJ_G0024332	Snrnp35	100	86.777	ENSCPBG00000025965	SNRNP35	81	79.358	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024332	Snrnp35	95	53.913	ENSCSAVG00000000748	-	94	56.805	Ciona_savignyi
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSCANG00000025364	SNRNP35	90	90.667	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024332	Snrnp35	100	99.174	ENSCGRG00001012630	Snrnp35	91	96.429	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024332	Snrnp35	100	99.174	ENSCGRG00000002063	Snrnp35	91	96.429	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024332	Snrnp35	98	75.630	ENSDARG00000099913	snrnp35	81	76.190	Danio_rerio
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSDNOG00000038603	SNRNP35	91	92.889	Dasypus_novemcinctus
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSDORG00000001859	Snrnp35	91	92.889	Dipodomys_ordii
MGP_PahariEiJ_G0024332	Snrnp35	98	51.695	ENSEBUG00000003535	snrnp35	62	59.639	Eptatretus_burgeri
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSEASG00005012617	SNRNP35	91	92.444	Equus_asinus_asinus
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSECAG00000006080	SNRNP35	91	92.444	Equus_caballus
MGP_PahariEiJ_G0024332	Snrnp35	100	94.215	ENSEEUG00000011544	SNRNP35	80	91.371	Erinaceus_europaeus
MGP_PahariEiJ_G0024332	Snrnp35	100	79.339	ENSELUG00000000071	snrnp35	72	79.310	Esox_lucius
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSFCAG00000001159	SNRNP35	90	91.111	Felis_catus
MGP_PahariEiJ_G0024332	Snrnp35	100	90.083	ENSFALG00000014650	SNRNP35	91	80.180	Ficedula_albicollis
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSFDAG00000018743	SNRNP35	91	80.444	Fukomys_damarensis
MGP_PahariEiJ_G0024332	Snrnp35	100	75.207	ENSGMOG00000002299	snrnp35	73	76.471	Gadus_morhua
MGP_PahariEiJ_G0024332	Snrnp35	100	90.083	ENSGALG00000003318	SNRNP35	82	80.734	Gallus_gallus
MGP_PahariEiJ_G0024332	Snrnp35	100	75.207	ENSGACG00000020631	snrnp35	73	77.059	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSGGOG00000015936	SNRNP35	90	92.000	Gorilla_gorilla
MGP_PahariEiJ_G0024332	Snrnp35	100	79.339	ENSHBUG00000015853	snrnp35	80	81.176	Haplochromis_burtoni
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSHGLG00000017961	SNRNP35	91	90.667	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSHGLG00100019252	SNRNP35	91	90.667	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024332	Snrnp35	100	71.901	ENSIPUG00000016053	snrnp35	66	74.286	Ictalurus_punctatus
MGP_PahariEiJ_G0024332	Snrnp35	100	92.562	ENSSTOG00000025145	SNRNP35	92	88.444	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024332	Snrnp35	100	98.347	ENSJJAG00000013421	Snrnp35	89	92.889	Jaculus_jaculus
MGP_PahariEiJ_G0024332	Snrnp35	100	85.950	ENSLACG00000017176	SNRNP35	77	77.315	Latimeria_chalumnae
MGP_PahariEiJ_G0024332	Snrnp35	100	78.512	ENSLOCG00000018154	snrnp35	64	79.885	Lepisosteus_oculatus
MGP_PahariEiJ_G0024332	Snrnp35	100	94.215	ENSLAFG00000022302	SNRNP35	91	91.111	Loxodonta_africana
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSMFAG00000008986	SNRNP35	91	91.111	Macaca_fascicularis
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSMMUG00000008411	SNRNP35	91	91.111	Macaca_mulatta
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSMNEG00000018139	SNRNP35	91	91.111	Macaca_nemestrina
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSMLEG00000040998	SNRNP35	90	91.111	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024332	Snrnp35	100	80.165	ENSMAMG00000018927	snrnp35	89	70.833	Mastacembelus_armatus
MGP_PahariEiJ_G0024332	Snrnp35	100	79.339	ENSMZEG00005018928	snrnp35	81	81.176	Maylandia_zebra
MGP_PahariEiJ_G0024332	Snrnp35	96	70.690	ENSMZEG00005018947	-	78	75.152	Maylandia_zebra
MGP_PahariEiJ_G0024332	Snrnp35	100	90.083	ENSMGAG00000003241	SNRNP35	89	80.734	Meleagris_gallopavo
MGP_PahariEiJ_G0024332	Snrnp35	100	99.174	ENSMAUG00000001690	Snrnp35	91	97.321	Mesocricetus_auratus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSMICG00000026512	SNRNP35	90	92.000	Microcebus_murinus
MGP_PahariEiJ_G0024332	Snrnp35	100	97.521	ENSMOCG00000000548	Snrnp35	91	96.000	Microtus_ochrogaster
MGP_PahariEiJ_G0024332	Snrnp35	100	77.686	ENSMMOG00000018779	snrnp35	94	69.091	Mola_mola
MGP_PahariEiJ_G0024332	Snrnp35	100	87.603	ENSMODG00000012481	SNRNP35	97	87.356	Monodelphis_domestica
MGP_PahariEiJ_G0024332	Snrnp35	100	99.174	MGP_CAROLIEiJ_G0027752	Snrnp35	100	99.174	Mus_caroli
MGP_PahariEiJ_G0024332	Snrnp35	100	100.000	ENSMUSG00000029402	Snrnp35	100	100.000	Mus_musculus
MGP_PahariEiJ_G0024332	Snrnp35	100	100.000	MGP_SPRETEiJ_G0028751	Snrnp35	100	100.000	Mus_spretus
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSMPUG00000019392	SNRNP35	91	91.111	Mustela_putorius_furo
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSMLUG00000025311	SNRNP35	91	88.444	Myotis_lucifugus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSNGAG00000010711	Snrnp35	92	92.511	Nannospalax_galili
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSNLEG00000029859	SNRNP35	90	92.000	Nomascus_leucogenys
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSOPRG00000011119	SNRNP35	91	88.444	Ochotona_princeps
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSODEG00000019870	SNRNP35	91	91.556	Octodon_degus
MGP_PahariEiJ_G0024332	Snrnp35	100	79.339	ENSONIG00000021361	snrnp35	89	69.725	Oreochromis_niloticus
MGP_PahariEiJ_G0024332	Snrnp35	100	88.430	ENSOANG00000002697	SNRNP35	95	80.870	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSOCUG00000021248	SNRNP35	91	90.667	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024332	Snrnp35	100	79.339	ENSORLG00000005673	snrnp35	79	82.143	Oryzias_latipes
MGP_PahariEiJ_G0024332	Snrnp35	100	80.165	ENSORLG00015014439	snrnp35	82	82.738	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSOGAG00000011301	SNRNP35	91	92.000	Otolemur_garnettii
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSOARG00000004583	SNRNP35	91	91.111	Ovis_aries
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSPPAG00000000480	SNRNP35	90	91.556	Pan_paniscus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSPPRG00000013139	SNRNP35	90	90.667	Panthera_pardus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSPTIG00000015832	SNRNP35	90	90.667	Panthera_tigris_altaica
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSPTRG00000023573	SNRNP35	90	91.556	Pan_troglodytes
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSPANG00000019739	SNRNP35	90	91.111	Papio_anubis
MGP_PahariEiJ_G0024332	Snrnp35	100	76.860	ENSPKIG00000005221	snrnp35	81	79.290	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024332	Snrnp35	100	87.603	ENSPSIG00000000450	SNRNP35	81	79.358	Pelodiscus_sinensis
MGP_PahariEiJ_G0024332	Snrnp35	100	85.950	ENSPCIG00000010978	SNRNP35	84	80.357	Phascolarctos_cinereus
MGP_PahariEiJ_G0024332	Snrnp35	100	81.818	ENSPFOG00000019881	snrnp35	76	83.929	Poecilia_formosa
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSPPYG00000005088	SNRNP35	90	92.000	Pongo_abelii
MGP_PahariEiJ_G0024332	Snrnp35	100	94.215	ENSPCAG00000011478	SNRNP35	91	90.667	Procavia_capensis
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSPCOG00000009946	SNRNP35	91	92.444	Propithecus_coquereli
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSPVAG00000015317	SNRNP35	91	91.111	Pteropus_vampyrus
MGP_PahariEiJ_G0024332	Snrnp35	100	79.339	ENSPNAG00000020589	snrnp35	69	79.096	Pygocentrus_nattereri
MGP_PahariEiJ_G0024332	Snrnp35	100	99.174	ENSRNOG00000001060	Snrnp35	100	96.721	Rattus_norvegicus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSRBIG00000043111	SNRNP35	90	91.111	Rhinopithecus_bieti
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSRROG00000032878	SNRNP35	90	91.111	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024332	Snrnp35	100	94.215	ENSSBOG00000012231	SNRNP35	90	89.823	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024332	Snrnp35	100	85.124	ENSSHAG00000015558	-	91	79.018	Sarcophilus_harrisii
MGP_PahariEiJ_G0024332	Snrnp35	100	84.298	ENSSHAG00000001216	-	91	77.232	Sarcophilus_harrisii
MGP_PahariEiJ_G0024332	Snrnp35	100	77.686	ENSSFOG00015003785	snrnp35	90	80.473	Scleropages_formosus
MGP_PahariEiJ_G0024332	Snrnp35	100	77.686	ENSSLDG00000017209	snrnp35	80	79.412	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSSARG00000012656	SNRNP35	91	88.889	Sorex_araneus
MGP_PahariEiJ_G0024332	Snrnp35	100	83.471	ENSSPUG00000012768	SNRNP35	85	75.446	Sphenodon_punctatus
MGP_PahariEiJ_G0024332	Snrnp35	100	77.686	ENSSPAG00000008207	snrnp35	79	80.000	Stegastes_partitus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSSSCG00000022212	SNRNP35	99	91.038	Sus_scrofa
MGP_PahariEiJ_G0024332	Snrnp35	100	90.083	ENSTGUG00000005364	-	92	80.180	Taeniopygia_guttata
MGP_PahariEiJ_G0024332	Snrnp35	100	87.603	ENSTGUG00000015471	-	82	79.817	Taeniopygia_guttata
MGP_PahariEiJ_G0024332	Snrnp35	100	77.686	ENSTNIG00000009984	snrnp35	80	79.762	Tetraodon_nigroviridis
MGP_PahariEiJ_G0024332	Snrnp35	100	95.041	ENSTBEG00000002309	SNRNP35	91	89.333	Tupaia_belangeri
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSUAMG00000012611	SNRNP35	91	91.111	Ursus_americanus
MGP_PahariEiJ_G0024332	Snrnp35	100	96.694	ENSUMAG00000003914	SNRNP35	89	91.111	Ursus_maritimus
MGP_PahariEiJ_G0024332	Snrnp35	100	95.868	ENSVVUG00000027761	-	91	89.778	Vulpes_vulpes
MGP_PahariEiJ_G0024332	Snrnp35	100	81.818	ENSXMAG00000019885	snrnp35	67	83.929	Xiphophorus_maculatus