EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024383 (Gene tree)
Gene ID: 110313163
Gene Symbol: Tyw1
Alias: Rsafd1
Full Name: tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 91231 bases
Position: chr23:24428112-24519342
Accession: 2141161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0059380	Wyosine_form	PF08608.12	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0059380	-	3067	-	MGP_PahariEiJ_P0059380	718 (aa)	-	-
MGP_PahariEiJ_T0059381	-	4247	-	-	- (aa)	-	-
MGP_PahariEiJ_T0059382	-	4588	-	MGP_PahariEiJ_P0059382	398 (aa)	-	-
MGP_PahariEiJ_T0059383	-	1943	-	MGP_PahariEiJ_P0059383	394 (aa)	-	-
MGP_PahariEiJ_T0059384	-	771	-	MGP_PahariEiJ_P0059384	234 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024383	Tyw1	99	69.071	ENSG00000277149	TYW1B	99	69.209	Homo_sapiens
MGP_PahariEiJ_G0024383	Tyw1	99	79.367	ENSG00000198874	TYW1	99	78.404	Homo_sapiens
MGP_PahariEiJ_G0024383	Tyw1	98	67.270	ENSAPOG00000014391	tyw1	96	67.270	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024383	Tyw1	98	65.449	ENSACIG00000007325	tyw1	99	65.120	Amphilophus_citrinellus
MGP_PahariEiJ_G0024383	Tyw1	98	67.455	ENSAOCG00000016792	tyw1	96	67.455	Amphiprion_ocellaris
MGP_PahariEiJ_G0024383	Tyw1	98	67.177	ENSAPEG00000015939	tyw1	99	68.168	Amphiprion_percula
MGP_PahariEiJ_G0024383	Tyw1	90	65.549	ENSATEG00000006856	tyw1	91	65.549	Anabas_testudineus
MGP_PahariEiJ_G0024383	Tyw1	100	77.596	ENSANAG00000037051	-	100	76.503	Aotus_nancymaae
MGP_PahariEiJ_G0024383	Tyw1	99	66.852	ENSACLG00000018688	tyw1	96	65.742	Astatotilapia_calliptera
MGP_PahariEiJ_G0024383	Tyw1	99	67.867	ENSAMXG00000004157	tyw1	99	67.590	Astyanax_mexicanus
MGP_PahariEiJ_G0024383	Tyw1	100	77.839	ENSBTAG00000008446	TYW1	100	77.839	Bos_taurus
MGP_PahariEiJ_G0024383	Tyw1	100	77.049	ENSCJAG00000004295	-	100	77.049	Callithrix_jacchus
MGP_PahariEiJ_G0024383	Tyw1	100	77.428	ENSCAFG00000010867	-	100	77.049	Canis_familiaris
MGP_PahariEiJ_G0024383	Tyw1	99	69.306	ENSCAFG00020005367	-	99	71.532	Canis_lupus_dingo
MGP_PahariEiJ_G0024383	Tyw1	100	78.659	ENSCHIG00000019510	-	100	78.249	Capra_hircus
MGP_PahariEiJ_G0024383	Tyw1	90	79.939	ENSTSYG00000008236	-	100	78.723	Carlito_syrichta
MGP_PahariEiJ_G0024383	Tyw1	88	73.899	ENSCAPG00000013569	-	100	73.899	Cavia_aperea
MGP_PahariEiJ_G0024383	Tyw1	99	75.643	ENSCPOG00000011182	-	99	75.408	Cavia_porcellus
MGP_PahariEiJ_G0024383	Tyw1	100	77.869	ENSCCAG00000026643	-	100	76.639	Cebus_capucinus
MGP_PahariEiJ_G0024383	Tyw1	100	78.825	ENSCATG00000043677	-	100	77.869	Cercocebus_atys
MGP_PahariEiJ_G0024383	Tyw1	99	75.782	ENSCLAG00000006321	-	99	77.049	Chinchilla_lanigera
MGP_PahariEiJ_G0024383	Tyw1	99	68.232	ENSCSAG00000018274	-	99	67.265	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024383	Tyw1	67	90.171	ENSCHOG00000003801	-	75	90.171	Choloepus_hoffmanni
MGP_PahariEiJ_G0024383	Tyw1	99	70.492	ENSCPBG00000014896	-	96	70.492	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024383	Tyw1	81	58.532	ENSCING00000004125	-	97	59.727	Ciona_intestinalis
MGP_PahariEiJ_G0024383	Tyw1	91	54.370	ENSCSAVG00000005712	-	100	55.332	Ciona_savignyi
MGP_PahariEiJ_G0024383	Tyw1	100	78.825	ENSCANG00000033209	-	100	77.869	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024383	Tyw1	71	92.824	ENSCGRG00001003679	Tyw1	88	92.824	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024383	Tyw1	98	66.480	ENSCSEG00000005810	tyw1	94	65.634	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024383	Tyw1	90	64.724	ENSCVAG00000001054	tyw1	92	64.877	Cyprinodon_variegatus
MGP_PahariEiJ_G0024383	Tyw1	99	68.094	ENSDARG00000062987	tyw1	96	68.094	Danio_rerio
MGP_PahariEiJ_G0024383	Tyw1	99	80.028	ENSDNOG00000024165	-	99	80.028	Dasypus_novemcinctus
MGP_PahariEiJ_G0024383	Tyw1	99	66.713	ENSDORG00000014772	Tyw1	99	66.297	Dipodomys_ordii
MGP_PahariEiJ_G0024383	Tyw1	51	52.304	ENSETEG00000009904	-	83	52.304	Echinops_telfairi
MGP_PahariEiJ_G0024383	Tyw1	59	71.759	ENSEBUG00000004494	tyw1	90	71.759	Eptatretus_burgeri
MGP_PahariEiJ_G0024383	Tyw1	100	79.452	ENSEASG00005008818	-	100	78.904	Equus_asinus_asinus
MGP_PahariEiJ_G0024383	Tyw1	100	71.664	ENSECAG00000023164	-	100	71.389	Equus_caballus
MGP_PahariEiJ_G0024383	Tyw1	62	89.796	ENSEEUG00000005950	-	62	89.796	Erinaceus_europaeus
MGP_PahariEiJ_G0024383	Tyw1	99	65.289	ENSELUG00000008449	tyw1	98	66.768	Esox_lucius
MGP_PahariEiJ_G0024383	Tyw1	100	77.155	ENSFCAG00000014262	-	100	76.230	Felis_catus
MGP_PahariEiJ_G0024383	Tyw1	99	66.849	ENSFALG00000013810	-	100	65.750	Ficedula_albicollis
MGP_PahariEiJ_G0024383	Tyw1	99	76.575	ENSFDAG00000013270	-	99	76.575	Fukomys_damarensis
MGP_PahariEiJ_G0024383	Tyw1	84	67.317	ENSFHEG00000020824	tyw1	81	66.992	Fundulus_heteroclitus
MGP_PahariEiJ_G0024383	Tyw1	99	65.426	ENSGALG00000001110	-	99	68.529	Gallus_gallus
MGP_PahariEiJ_G0024383	Tyw1	99	65.881	ENSGACG00000012692	tyw1	98	66.019	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024383	Tyw1	99	70.386	ENSGAGG00000022393	-	99	70.386	Gopherus_agassizii
MGP_PahariEiJ_G0024383	Tyw1	89	69.572	ENSGGOG00000001473	TYW1	99	69.725	Gorilla_gorilla
MGP_PahariEiJ_G0024383	Tyw1	99	66.713	ENSHBUG00000002640	tyw1	96	66.620	Haplochromis_burtoni
MGP_PahariEiJ_G0024383	Tyw1	88	76.850	ENSHGLG00000012093	-	100	75.981	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024383	Tyw1	100	76.197	ENSHGLG00100011743	TYW1	100	76.881	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024383	Tyw1	98	61.678	ENSHCOG00000019949	tyw1	96	61.678	Hippocampus_comes
MGP_PahariEiJ_G0024383	Tyw1	98	66.201	ENSIPUG00000016330	tyw1	95	66.760	Ictalurus_punctatus
MGP_PahariEiJ_G0024383	Tyw1	99	76.374	ENSSTOG00000004067	-	91	76.913	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024383	Tyw1	99	81.354	ENSJJAG00000022959	Tyw1	99	81.492	Jaculus_jaculus
MGP_PahariEiJ_G0024383	Tyw1	98	65.690	ENSKMAG00000018599	tyw1	96	65.690	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024383	Tyw1	99	63.896	ENSLACG00000018917	tyw1	96	65.027	Latimeria_chalumnae
MGP_PahariEiJ_G0024383	Tyw1	99	67.720	ENSLOCG00000004035	tyw1	96	66.986	Lepisosteus_oculatus
MGP_PahariEiJ_G0024383	Tyw1	100	79.098	ENSMFAG00000035457	-	100	78.142	Macaca_fascicularis
MGP_PahariEiJ_G0024383	Tyw1	100	79.098	ENSMMUG00000030374	-	100	78.142	Macaca_mulatta
MGP_PahariEiJ_G0024383	Tyw1	100	79.098	ENSMNEG00000041992	-	100	78.142	Macaca_nemestrina
MGP_PahariEiJ_G0024383	Tyw1	100	78.825	ENSMLEG00000039741	-	100	77.869	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024383	Tyw1	98	66.898	ENSMAMG00000016089	tyw1	97	63.418	Mastacembelus_armatus
MGP_PahariEiJ_G0024383	Tyw1	92	70.437	ENSMZEG00005024386	tyw1	97	70.242	Maylandia_zebra
MGP_PahariEiJ_G0024383	Tyw1	99	68.665	ENSMGAG00000002176	-	99	68.665	Meleagris_gallopavo
MGP_PahariEiJ_G0024383	Tyw1	99	89.320	ENSMAUG00000002959	Tyw1	99	88.627	Mesocricetus_auratus
MGP_PahariEiJ_G0024383	Tyw1	99	79.477	ENSMICG00000014374	-	100	78.512	Microcebus_murinus
MGP_PahariEiJ_G0024383	Tyw1	99	86.288	ENSMOCG00000017720	Tyw1	99	86.704	Microtus_ochrogaster
MGP_PahariEiJ_G0024383	Tyw1	98	62.518	ENSMMOG00000005064	tyw1	97	62.695	Mola_mola
MGP_PahariEiJ_G0024383	Tyw1	99	71.721	ENSMODG00000025697	-	99	71.721	Monodelphis_domestica
MGP_PahariEiJ_G0024383	Tyw1	99	67.268	ENSMALG00000010238	tyw1	96	67.268	Monopterus_albus
MGP_PahariEiJ_G0024383	Tyw1	100	93.897	MGP_CAROLIEiJ_G0027801	Tyw1	100	93.897	Mus_caroli
MGP_PahariEiJ_G0024383	Tyw1	100	93.759	ENSMUSG00000056310	Tyw1	100	93.759	Mus_musculus
MGP_PahariEiJ_G0024383	Tyw1	100	93.759	MGP_SPRETEiJ_G0028799	Tyw1	100	93.759	Mus_spretus
MGP_PahariEiJ_G0024383	Tyw1	95	77.697	ENSMPUG00000016191	-	99	76.565	Mustela_putorius_furo
MGP_PahariEiJ_G0024383	Tyw1	99	74.384	ENSMLUG00000013582	-	99	75.753	Myotis_lucifugus
MGP_PahariEiJ_G0024383	Tyw1	99	82.615	ENSNGAG00000002742	Tyw1	99	82.615	Nannospalax_galili
MGP_PahariEiJ_G0024383	Tyw1	96	66.234	ENSNBRG00000016996	tyw1	99	66.187	Neolamprologus_brichardi
MGP_PahariEiJ_G0024383	Tyw1	99	77.610	ENSNLEG00000013210	-	98	76.648	Nomascus_leucogenys
MGP_PahariEiJ_G0024383	Tyw1	92	61.968	ENSOPRG00000008734	-	88	62.219	Ochotona_princeps
MGP_PahariEiJ_G0024383	Tyw1	99	70.694	ENSODEG00000014729	-	99	70.222	Octodon_degus
MGP_PahariEiJ_G0024383	Tyw1	99	67.692	ENSONIG00000005872	tyw1	96	67.598	Oreochromis_niloticus
MGP_PahariEiJ_G0024383	Tyw1	99	78.571	ENSOCUG00000003173	-	99	78.571	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024383	Tyw1	98	66.667	ENSORLG00000001393	tyw1	98	65.406	Oryzias_latipes
MGP_PahariEiJ_G0024383	Tyw1	98	66.806	ENSORLG00020019361	tyw1	98	65.782	Oryzias_latipes_hni
MGP_PahariEiJ_G0024383	Tyw1	98	66.573	ENSORLG00015008095	tyw1	95	65.786	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024383	Tyw1	94	81.433	ENSOGAG00000016555	-	98	77.886	Otolemur_garnettii
MGP_PahariEiJ_G0024383	Tyw1	100	78.397	ENSOARG00000010673	-	100	77.989	Ovis_aries
MGP_PahariEiJ_G0024383	Tyw1	100	77.824	ENSPPRG00000004945	-	100	76.891	Panthera_pardus
MGP_PahariEiJ_G0024383	Tyw1	100	77.961	ENSPTIG00000019545	-	100	77.029	Panthera_tigris_altaica
MGP_PahariEiJ_G0024383	Tyw1	99	72.367	ENSPTRG00000023076	TYW1B	98	72.503	Pan_troglodytes
MGP_PahariEiJ_G0024383	Tyw1	100	78.689	ENSPANG00000019053	-	100	77.732	Papio_anubis
MGP_PahariEiJ_G0024383	Tyw1	99	66.436	ENSPKIG00000006545	tyw1	96	66.436	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024383	Tyw1	96	65.286	ENSPMGG00000004240	tyw1	99	64.164	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024383	Tyw1	100	88.536	ENSPEMG00000008274	Tyw1	100	88.122	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024383	Tyw1	98	67.922	ENSPFOG00000015855	tyw1	98	67.922	Poecilia_formosa
MGP_PahariEiJ_G0024383	Tyw1	98	67.127	ENSPLAG00000000838	tyw1	100	65.657	Poecilia_latipinna
MGP_PahariEiJ_G0024383	Tyw1	98	67.313	ENSPMEG00000019437	tyw1	100	64.326	Poecilia_mexicana
MGP_PahariEiJ_G0024383	Tyw1	98	64.888	ENSPREG00000018773	tyw1	96	64.846	Poecilia_reticulata
MGP_PahariEiJ_G0024383	Tyw1	100	79.098	ENSPPYG00000017514	TYW1	100	78.142	Pongo_abelii
MGP_PahariEiJ_G0024383	Tyw1	99	63.100	ENSPCOG00000015294	-	96	68.165	Propithecus_coquereli
MGP_PahariEiJ_G0024383	Tyw1	99	66.852	ENSPNYG00000022381	tyw1	96	65.742	Pundamilia_nyererei
MGP_PahariEiJ_G0024383	Tyw1	98	68.487	ENSPNAG00000009001	tyw1	98	68.627	Pygocentrus_nattereri
MGP_PahariEiJ_G0024383	Tyw1	99	90.707	ENSRNOG00000024352	Tyw1	99	91.540	Rattus_norvegicus
MGP_PahariEiJ_G0024383	Tyw1	100	78.689	ENSRBIG00000039619	-	100	77.732	Rhinopithecus_bieti
MGP_PahariEiJ_G0024383	Tyw1	99	79.121	ENSRROG00000039780	-	99	78.159	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024383	Tyw1	100	77.322	ENSSBOG00000025873	-	100	77.322	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024383	Tyw1	99	71.742	ENSSHAG00000010346	-	100	72.740	Sarcophilus_harrisii
MGP_PahariEiJ_G0024383	Tyw1	98	68.820	ENSSFOG00015001054	tyw1	99	68.630	Scleropages_formosus
MGP_PahariEiJ_G0024383	Tyw1	99	66.203	ENSSMAG00000020514	tyw1	96	65.877	Scophthalmus_maximus
MGP_PahariEiJ_G0024383	Tyw1	99	66.621	ENSSDUG00000001552	tyw1	94	70.526	Seriola_dumerili
MGP_PahariEiJ_G0024383	Tyw1	99	66.758	ENSSLDG00000003554	tyw1	96	67.033	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024383	Tyw1	99	68.638	ENSSPUG00000002715	-	99	69.188	Sphenodon_punctatus
MGP_PahariEiJ_G0024383	Tyw1	100	78.493	ENSSSCG00000007733	-	100	78.493	Sus_scrofa
MGP_PahariEiJ_G0024383	Tyw1	90	67.625	ENSTGUG00000003428	-	99	66.717	Taeniopygia_guttata
MGP_PahariEiJ_G0024383	Tyw1	98	66.014	ENSTRUG00000016107	tyw1	93	65.694	Takifugu_rubripes
MGP_PahariEiJ_G0024383	Tyw1	91	70.765	ENSTNIG00000018999	tyw1	100	70.165	Tetraodon_nigroviridis
MGP_PahariEiJ_G0024383	Tyw1	100	78.112	ENSUMAG00000015343	-	100	77.186	Ursus_maritimus
MGP_PahariEiJ_G0024383	Tyw1	99	77.442	ENSVVUG00000016457	-	99	77.060	Vulpes_vulpes
MGP_PahariEiJ_G0024383	Tyw1	99	68.033	ENSXETG00000010094	tyw1	99	67.764	Xenopus_tropicalis
MGP_PahariEiJ_G0024383	Tyw1	98	67.131	ENSXMAG00000013125	tyw1	99	67.474	Xiphophorus_maculatus