EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024425 (Gene tree)
Gene ID: 110312916
Gene Symbol: Srrm3
Alias: 2900083I11Rik|SRm300-like|Srrm2l
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 69480 bases
Position: chr23:25983843-26053322
Accession: 1920309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0059596	cwf21	PF08312.12	1.1e-16	1	1
MGP_PahariEiJ_P0059599	cwf21	PF08312.12	2.4e-15	1	1
MGP_PahariEiJ_P0059599	SRRM_C	PF15230.6	9.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0059595	-	1753	-	-	- (aa)	-	-
MGP_PahariEiJ_T0059597	-	1208	-	MGP_PahariEiJ_P0059597	362 (aa)	-	-
MGP_PahariEiJ_T0059596	-	526	-	MGP_PahariEiJ_P0059596	124 (aa)	-	-
MGP_PahariEiJ_T0059599	-	3956	-	MGP_PahariEiJ_P0059599	648 (aa)	-	-
MGP_PahariEiJ_T0059598	-	2287	-	MGP_PahariEiJ_P0059598	342 (aa)	-	-
MGP_PahariEiJ_T0059601	-	559	-	-	- (aa)	-	-
MGP_PahariEiJ_T0059600	-	671	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024425's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0024425	Srrm3	89	51.667	MGP_PahariEiJ_G0023478	Srrm2	71	50.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024425	Srrm3	100	89.516	ENSG00000177679	SRRM3	95	88.350	Homo_sapiens
MGP_PahariEiJ_G0024425	Srrm3	88	75.229	ENSACAG00000000452	SRRM3	50	63.986	Anolis_carolinensis
MGP_PahariEiJ_G0024425	Srrm3	100	92.742	ENSANAG00000031983	SRRM3	60	81.867	Aotus_nancymaae
MGP_PahariEiJ_G0024425	Srrm3	100	88.710	ENSBTAG00000007879	-	99	81.250	Bos_taurus
MGP_PahariEiJ_G0024425	Srrm3	100	91.935	ENSCJAG00000016307	SRRM3	95	89.806	Callithrix_jacchus
MGP_PahariEiJ_G0024425	Srrm3	100	90.323	ENSCAFG00000013537	SRRM3	73	88.927	Canis_familiaris
MGP_PahariEiJ_G0024425	Srrm3	100	90.323	ENSCAFG00020013073	SRRM3	94	75.360	Canis_lupus_dingo
MGP_PahariEiJ_G0024425	Srrm3	100	88.710	ENSCHIG00000014018	SRRM3	97	74.740	Capra_hircus
MGP_PahariEiJ_G0024425	Srrm3	99	77.168	ENSCPOG00000038685	SRRM3	94	81.511	Cavia_porcellus
MGP_PahariEiJ_G0024425	Srrm3	100	92.742	ENSCCAG00000033359	SRRM3	95	89.806	Cebus_capucinus
MGP_PahariEiJ_G0024425	Srrm3	100	91.129	ENSCATG00000043129	SRRM3	57	83.988	Cercocebus_atys
MGP_PahariEiJ_G0024425	Srrm3	100	93.548	ENSCLAG00000007682	SRRM3	100	93.548	Chinchilla_lanigera
MGP_PahariEiJ_G0024425	Srrm3	100	90.323	ENSCSAG00000018140	SRRM3	97	87.047	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024425	Srrm3	100	95.968	ENSCGRG00001011385	Srrm3	95	94.617	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024425	Srrm3	94	89.744	ENSDNOG00000046922	SRRM3	95	73.786	Dasypus_novemcinctus
MGP_PahariEiJ_G0024425	Srrm3	100	89.516	ENSEASG00005016840	-	97	85.753	Equus_asinus_asinus
MGP_PahariEiJ_G0024425	Srrm3	100	88.710	ENSECAG00000022142	-	96	86.188	Equus_caballus
MGP_PahariEiJ_G0024425	Srrm3	100	91.129	ENSFCAG00000044112	SRRM3	95	87.540	Felis_catus
MGP_PahariEiJ_G0024425	Srrm3	65	97.531	ENSFDAG00000016913	SRRM3	100	97.531	Fukomys_damarensis
MGP_PahariEiJ_G0024425	Srrm3	97	74.167	ENSGALG00000001932	SRRM3	77	62.356	Gallus_gallus
MGP_PahariEiJ_G0024425	Srrm3	90	91.964	ENSGGOG00000036497	-	82	78.246	Gorilla_gorilla
MGP_PahariEiJ_G0024425	Srrm3	100	91.129	ENSHGLG00000015576	SRRM3	100	91.129	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024425	Srrm3	100	91.129	ENSSTOG00000014181	SRRM3	100	91.129	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024425	Srrm3	96	80.909	ENSJJAG00000023441	Srrm3	97	79.585	Jaculus_jaculus
MGP_PahariEiJ_G0024425	Srrm3	100	68.548	ENSMMUG00000046728	SRRM3	56	75.936	Macaca_mulatta
MGP_PahariEiJ_G0024425	Srrm3	97	74.167	ENSMGAG00000003690	SRRM3	75	66.319	Meleagris_gallopavo
MGP_PahariEiJ_G0024425	Srrm3	100	95.161	ENSMAUG00000017613	Srrm3	100	95.161	Mesocricetus_auratus
MGP_PahariEiJ_G0024425	Srrm3	100	92.742	ENSMICG00000010668	SRRM3	94	90.774	Microcebus_murinus
MGP_PahariEiJ_G0024425	Srrm3	100	94.599	ENSMOCG00000002565	Srrm3	95	94.617	Microtus_ochrogaster
MGP_PahariEiJ_G0024425	Srrm3	100	99.194	MGP_CAROLIEiJ_G0027845	-	100	98.538	Mus_caroli
MGP_PahariEiJ_G0024425	Srrm3	100	99.228	ENSMUSG00000039860	Srrm3	100	99.228	Mus_musculus
MGP_PahariEiJ_G0024425	Srrm3	100	98.920	MGP_SPRETEiJ_G0028844	Srrm3	100	98.920	Mus_spretus
MGP_PahariEiJ_G0024425	Srrm3	100	84.677	ENSNLEG00000008423	-	58	71.271	Nomascus_leucogenys
MGP_PahariEiJ_G0024425	Srrm3	89	83.636	ENSMEUG00000013994	SRRM3	62	83.636	Notamacropus_eugenii
MGP_PahariEiJ_G0024425	Srrm3	100	92.742	ENSODEG00000015988	SRRM3	95	87.987	Octodon_degus
MGP_PahariEiJ_G0024425	Srrm3	88	67.857	ENSONIG00000012732	-	50	55.973	Oreochromis_niloticus
MGP_PahariEiJ_G0024425	Srrm3	98	68.033	ENSOANG00000004590	-	58	53.314	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0024425	Srrm3	98	87.705	ENSOGAG00000030805	SRRM3	94	87.379	Otolemur_garnettii
MGP_PahariEiJ_G0024425	Srrm3	89	90.000	ENSOARG00000013722	SRRM3	51	80.243	Ovis_aries
MGP_PahariEiJ_G0024425	Srrm3	100	83.871	ENSPPRG00000006254	SRRM3	72	90.123	Panthera_pardus
MGP_PahariEiJ_G0024425	Srrm3	100	91.129	ENSPTRG00000019317	SRRM3	95	88.673	Pan_troglodytes
MGP_PahariEiJ_G0024425	Srrm3	90	92.857	ENSPANG00000000776	SRRM3	70	86.702	Papio_anubis
MGP_PahariEiJ_G0024425	Srrm3	90	78.571	ENSPSIG00000007850	SRRM3	91	52.517	Pelodiscus_sinensis
MGP_PahariEiJ_G0024425	Srrm3	100	95.968	ENSPEMG00000012358	-	100	95.968	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024425	Srrm3	98	74.107	ENSPCAG00000013700	SRRM3	77	76.860	Procavia_capensis
MGP_PahariEiJ_G0024425	Srrm3	100	91.129	ENSPCOG00000028464	SRRM3	95	86.570	Propithecus_coquereli
MGP_PahariEiJ_G0024425	Srrm3	100	89.516	ENSPVAG00000003400	SRRM3	70	74.179	Pteropus_vampyrus
MGP_PahariEiJ_G0024425	Srrm3	100	96.296	ENSRNOG00000001439	Srrm3	100	96.296	Rattus_norvegicus
MGP_PahariEiJ_G0024425	Srrm3	100	90.323	ENSRROG00000034980	SRRM3	87	91.406	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024425	Srrm3	89	78.182	ENSSPUG00000006285	SRRM3	65	78.182	Sphenodon_punctatus
MGP_PahariEiJ_G0024425	Srrm3	100	85.484	ENSSSCG00000032250	SRRM3	94	76.375	Sus_scrofa
MGP_PahariEiJ_G0024425	Srrm3	58	74.359	ENSTNIG00000008549	-	50	47.130	Tetraodon_nigroviridis
MGP_PahariEiJ_G0024425	Srrm3	90	90.991	ENSTTRG00000014836	-	62	80.992	Tursiops_truncatus