EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024462 (Gene tree)
Gene ID: 110313065
Gene Symbol: Pop7
Alias: 0610037N12Rik|Rpp20
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 1108 bases
Position: chr23:27625003-27626110
Accession: 110313065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0059795	Alba	PF01918.21	1.3e-09	1	1
MGP_PahariEiJ_P0059796	Alba	PF01918.21	1.3e-09	1	1
MGP_PahariEiJ_P0059795	Rpp20	PF12328.8	1.2e-19	1	1
MGP_PahariEiJ_P0059796	Rpp20	PF12328.8	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0059796	-	899	-	MGP_PahariEiJ_P0059796	140 (aa)	XP_021042753	UPI000A313909
MGP_PahariEiJ_T0059795	-	992	-	MGP_PahariEiJ_P0059795	140 (aa)	XP_021042753	UPI000A313909

Gene Model

Click here to download MGP_PahariEiJ_G0024462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSG00000172336	POP7	100	97.857	Homo_sapiens
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSAPOG00000015722	pop7	100	66.197	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024462	Pop7	94	69.925	ENSACIG00000022071	pop7	93	72.180	Amphilophus_citrinellus
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSAOCG00000021222	pop7	82	72.093	Amphiprion_ocellaris
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSAPEG00000018819	pop7	82	72.093	Amphiprion_percula
MGP_PahariEiJ_G0024462	Pop7	96	69.343	ENSATEG00000017615	pop7	88	69.343	Anabas_testudineus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSANAG00000019054	POP7	100	97.143	Aotus_nancymaae
MGP_PahariEiJ_G0024462	Pop7	87	74.194	ENSACLG00000018898	pop7	79	74.194	Astatotilapia_calliptera
MGP_PahariEiJ_G0024462	Pop7	86	77.236	ENSAMXG00000025789	pop7	84	77.236	Astyanax_mexicanus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSCJAG00000015056	POP7	100	97.143	Callithrix_jacchus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSCAFG00000014205	POP7	100	97.857	Canis_familiaris
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSCAFG00020013863	POP7	100	97.857	Canis_lupus_dingo
MGP_PahariEiJ_G0024462	Pop7	100	98.571	ENSCHIG00000013484	POP7	100	98.571	Capra_hircus
MGP_PahariEiJ_G0024462	Pop7	100	96.429	ENSTSYG00000035016	POP7	100	96.429	Carlito_syrichta
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSCPOG00000005767	POP7	100	97.857	Cavia_porcellus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSCCAG00000008898	POP7	100	97.143	Cebus_capucinus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSCATG00000010371	POP7	100	97.143	Cercocebus_atys
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSCLAG00000001541	POP7	100	97.857	Chinchilla_lanigera
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSCSAG00000017937	POP7	100	97.143	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSCANG00000000652	POP7	100	97.857	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSCGRG00001010593	Pop7	100	97.143	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSCGRG00000019940	Pop7	100	97.143	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSCSEG00000013197	pop7	96	72.093	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024462	Pop7	94	69.403	ENSCVAG00000016728	pop7	85	69.403	Cyprinodon_variegatus
MGP_PahariEiJ_G0024462	Pop7	95	68.889	ENSDARG00000036394	pop7	86	68.889	Danio_rerio
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSDNOG00000031207	POP7	64	97.857	Dasypus_novemcinctus
MGP_PahariEiJ_G0024462	Pop7	100	95.714	ENSDORG00000012512	Pop7	100	95.714	Dipodomys_ordii
MGP_PahariEiJ_G0024462	Pop7	79	44.828	FBgn0066304	Rpp20	66	44.828	Drosophila_melanogaster
MGP_PahariEiJ_G0024462	Pop7	100	92.857	ENSETEG00000007941	POP7	100	92.857	Echinops_telfairi
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSEASG00005016994	POP7	100	97.857	Equus_asinus_asinus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSECAG00000010383	POP7	100	97.857	Equus_caballus
MGP_PahariEiJ_G0024462	Pop7	83	70.339	ENSELUG00000023947	pop7	88	70.339	Esox_lucius
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSFCAG00000006849	POP7	100	97.857	Felis_catus
MGP_PahariEiJ_G0024462	Pop7	100	98.571	ENSFDAG00000018839	POP7	100	98.571	Fukomys_damarensis
MGP_PahariEiJ_G0024462	Pop7	94	70.677	ENSFHEG00000012595	pop7	85	70.677	Fundulus_heteroclitus
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSGAFG00000017633	pop7	82	72.093	Gambusia_affinis
MGP_PahariEiJ_G0024462	Pop7	88	74.400	ENSGACG00000019931	pop7	79	74.400	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSGGOG00000016492	POP7	100	97.857	Gorilla_gorilla
MGP_PahariEiJ_G0024462	Pop7	87	70.968	ENSHBUG00000011987	pop7	90	70.968	Haplochromis_burtoni
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSHGLG00000018118	POP7	100	97.143	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSHGLG00100007908	POP7	100	97.143	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024462	Pop7	90	73.438	ENSHCOG00000010137	pop7	82	73.438	Hippocampus_comes
MGP_PahariEiJ_G0024462	Pop7	87	74.194	ENSIPUG00000000411	pop7	79	74.194	Ictalurus_punctatus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSSTOG00000030883	POP7	100	97.143	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSJJAG00000003989	Pop7	100	97.857	Jaculus_jaculus
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSKMAG00000010696	pop7	82	72.093	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024462	Pop7	86	72.358	ENSLBEG00000008621	pop7	77	72.358	Labrus_bergylta
MGP_PahariEiJ_G0024462	Pop7	91	71.318	ENSLBEG00000003483	pop7	89	71.318	Labrus_bergylta
MGP_PahariEiJ_G0024462	Pop7	100	72.603	ENSLACG00000010203	POP7	100	72.603	Latimeria_chalumnae
MGP_PahariEiJ_G0024462	Pop7	91	74.219	ENSLOCG00000017553	pop7	83	76.562	Lepisosteus_oculatus
MGP_PahariEiJ_G0024462	Pop7	100	92.143	ENSLAFG00000030032	POP7	100	92.143	Loxodonta_africana
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSMFAG00000027783	POP7	100	97.143	Macaca_fascicularis
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSMMUG00000008581	POP7	100	97.143	Macaca_mulatta
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSMNEG00000037495	POP7	100	97.143	Macaca_nemestrina
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSMLEG00000027597	POP7	100	97.143	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024462	Pop7	99	69.286	ENSMAMG00000007258	pop7	96	69.286	Mastacembelus_armatus
MGP_PahariEiJ_G0024462	Pop7	87	70.968	ENSMZEG00005005138	pop7	90	70.968	Maylandia_zebra
MGP_PahariEiJ_G0024462	Pop7	95	71.111	ENSMZEG00005022194	-	88	71.111	Maylandia_zebra
MGP_PahariEiJ_G0024462	Pop7	100	92.857	ENSMAUG00000015820	Pop7	100	92.857	Mesocricetus_auratus
MGP_PahariEiJ_G0024462	Pop7	100	98.571	ENSMICG00000009398	POP7	100	98.571	Microcebus_murinus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSMOCG00000013694	Pop7	100	97.857	Microtus_ochrogaster
MGP_PahariEiJ_G0024462	Pop7	91	69.767	ENSMMOG00000014095	pop7	90	72.093	Mola_mola
MGP_PahariEiJ_G0024462	Pop7	100	88.028	ENSMODG00000023662	POP7	100	91.549	Monodelphis_domestica
MGP_PahariEiJ_G0024462	Pop7	87	74.194	ENSMALG00000011180	pop7	92	74.194	Monopterus_albus
MGP_PahariEiJ_G0024462	Pop7	100	96.429	MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	Mus_caroli
MGP_PahariEiJ_G0024462	Pop7	100	96.429	ENSMUSG00000029715	Pop7	100	96.429	Mus_musculus
MGP_PahariEiJ_G0024462	Pop7	100	96.429	MGP_SPRETEiJ_G0028881	Pop7	100	96.429	Mus_spretus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSMPUG00000019765	POP7	100	97.143	Mustela_putorius_furo
MGP_PahariEiJ_G0024462	Pop7	100	95.714	ENSMLUG00000010110	POP7	100	95.714	Myotis_lucifugus
MGP_PahariEiJ_G0024462	Pop7	100	96.429	ENSNGAG00000021630	Pop7	100	96.429	Nannospalax_galili
MGP_PahariEiJ_G0024462	Pop7	87	73.387	ENSNBRG00000006286	pop7	87	73.387	Neolamprologus_brichardi
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSNLEG00000011939	POP7	100	97.143	Nomascus_leucogenys
MGP_PahariEiJ_G0024462	Pop7	54	96.000	ENSOPRG00000015185	POP7	100	96.000	Ochotona_princeps
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSODEG00000020363	POP7	100	97.857	Octodon_degus
MGP_PahariEiJ_G0024462	Pop7	100	84.286	ENSOANG00000001658	POP7	100	84.286	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSOCUG00000007818	POP7	100	97.857	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024462	Pop7	89	74.803	ENSORLG00000003594	pop7	88	74.803	Oryzias_latipes
MGP_PahariEiJ_G0024462	Pop7	94	73.684	ENSORLG00020017530	pop7	79	73.684	Oryzias_latipes_hni
MGP_PahariEiJ_G0024462	Pop7	99	70.423	ENSORLG00015015310	pop7	100	70.423	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024462	Pop7	88	76.800	ENSOMEG00000003667	pop7	81	76.800	Oryzias_melastigma
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSOGAG00000009340	POP7	100	97.143	Otolemur_garnettii
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSPPAG00000015339	POP7	100	97.857	Pan_paniscus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSPPRG00000018408	POP7	100	97.857	Panthera_pardus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSPTIG00000005807	POP7	100	97.857	Panthera_tigris_altaica
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSPTRG00000019504	POP7	100	97.857	Pan_troglodytes
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSPTRG00000047460	-	100	97.857	Pan_troglodytes
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSPANG00000006196	POP7	100	97.143	Papio_anubis
MGP_PahariEiJ_G0024462	Pop7	94	71.429	ENSPKIG00000019869	pop7	76	72.180	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024462	Pop7	75	70.093	ENSPSIG00000000415	POP7	92	70.732	Pelodiscus_sinensis
MGP_PahariEiJ_G0024462	Pop7	96	69.343	ENSPMGG00000011142	pop7	96	69.343	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSPEMG00000011583	Pop7	100	97.143	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024462	Pop7	100	88.028	ENSPCIG00000000517	POP7	72	89.437	Phascolarctos_cinereus
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSPFOG00000019976	pop7	82	72.093	Poecilia_formosa
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSPLAG00000007700	pop7	82	72.093	Poecilia_latipinna
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSPMEG00000010673	pop7	82	72.093	Poecilia_mexicana
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSPREG00000015137	pop7	82	72.093	Poecilia_reticulata
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSPPYG00000017426	POP7	100	97.857	Pongo_abelii
MGP_PahariEiJ_G0024462	Pop7	100	93.571	ENSPCAG00000010445	POP7	100	93.571	Procavia_capensis
MGP_PahariEiJ_G0024462	Pop7	85	90.756	ENSPCOG00000018009	-	88	90.756	Propithecus_coquereli
MGP_PahariEiJ_G0024462	Pop7	100	98.571	ENSPCOG00000009302	POP7	100	98.571	Propithecus_coquereli
MGP_PahariEiJ_G0024462	Pop7	87	70.968	ENSPNYG00000000975	pop7	90	70.968	Pundamilia_nyererei
MGP_PahariEiJ_G0024462	Pop7	87	71.774	ENSPNAG00000007206	pop7	86	74.194	Pygocentrus_nattereri
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSRNOG00000025310	Pop7	100	97.857	Rattus_norvegicus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSRBIG00000002671	POP7	100	97.857	Rhinopithecus_bieti
MGP_PahariEiJ_G0024462	Pop7	100	98.571	ENSRROG00000028543	POP7	100	98.571	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024462	Pop7	100	95.714	ENSSBOG00000005173	POP7	100	95.714	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024462	Pop7	100	88.028	ENSSHAG00000001026	POP7	100	89.437	Sarcophilus_harrisii
MGP_PahariEiJ_G0024462	Pop7	87	74.797	ENSSFOG00015007957	pop7	82	74.797	Scleropages_formosus
MGP_PahariEiJ_G0024462	Pop7	99	68.085	ENSSMAG00000015536	pop7	99	68.085	Scophthalmus_maximus
MGP_PahariEiJ_G0024462	Pop7	99	68.794	ENSSDUG00000022172	pop7	90	68.794	Seriola_dumerili
MGP_PahariEiJ_G0024462	Pop7	82	69.231	ENSSLDG00000019818	pop7	91	69.231	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024462	Pop7	90	71.875	ENSSPAG00000000652	pop7	76	71.875	Stegastes_partitus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSSSCG00000007672	POP7	100	97.857	Sus_scrofa
MGP_PahariEiJ_G0024462	Pop7	99	67.857	ENSTRUG00000024340	-	99	70.000	Takifugu_rubripes
MGP_PahariEiJ_G0024462	Pop7	93	69.697	ENSTRUG00000023845	pop7	84	71.970	Takifugu_rubripes
MGP_PahariEiJ_G0024462	Pop7	91	68.992	ENSTNIG00000001259	pop7	82	71.318	Tetraodon_nigroviridis
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSTBEG00000001849	POP7	100	97.857	Tupaia_belangeri
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSTTRG00000011012	POP7	100	97.143	Tursiops_truncatus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSUAMG00000028076	POP7	100	97.143	Ursus_americanus
MGP_PahariEiJ_G0024462	Pop7	100	97.143	ENSUMAG00000010895	POP7	100	97.143	Ursus_maritimus
MGP_PahariEiJ_G0024462	Pop7	100	97.857	ENSVVUG00000023472	POP7	100	97.857	Vulpes_vulpes
MGP_PahariEiJ_G0024462	Pop7	91	70.543	ENSXCOG00000012016	pop7	81	70.543	Xiphophorus_couchianus
MGP_PahariEiJ_G0024462	Pop7	91	72.093	ENSXMAG00000019746	pop7	82	72.093	Xiphophorus_maculatus