EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024534 (Gene tree)
Gene ID: 110312782
Gene Symbol: Papolb
Alias: Papola-ps|Papt|Plap-ps|TPAP
Full Name: poly(A) polymerase beta
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 4249 bases
Position: chr23:32622664-32626912
Accession: 110312782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0060130	PAP_RNA-bind	PF04926.15	3.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0060130	-	4249	-	MGP_PahariEiJ_P0060130	642 (aa)	XP_021042319	UPI000A30D199

Gene Model

Click here to download MGP_PahariEiJ_G0024534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0024534	Papolb	99	84.914	MGP_PahariEiJ_G0029850	Papola	93	84.914
MGP_PahariEiJ_G0024534	Papolb	86	66.607	MGP_PahariEiJ_G0016746	Papolg	77	66.607

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024534	Papolb	97	86.378	ENSG00000218823	PAPOLB	98	86.378	Homo_sapiens
MGP_PahariEiJ_G0024534	Papolb	97	81.731	ENSANAG00000033074	PAPOLB	98	81.731	Aotus_nancymaae
MGP_PahariEiJ_G0024534	Papolb	99	86.562	ENSBTAG00000052734	PAPOLB	94	86.562	Bos_taurus
MGP_PahariEiJ_G0024534	Papolb	79	86.166	ENSCPOG00000021527	PAPOLB	99	79.189	Cavia_porcellus
MGP_PahariEiJ_G0024534	Papolb	99	85.514	ENSCLAG00000004689	PAPOLB	100	85.514	Chinchilla_lanigera
MGP_PahariEiJ_G0024534	Papolb	98	83.703	ENSDNOG00000033378	PAPOLB	90	83.703	Dasypus_novemcinctus
MGP_PahariEiJ_G0024534	Papolb	95	90.375	ENSDORG00000001140	Papolb	99	88.906	Dipodomys_ordii
MGP_PahariEiJ_G0024534	Papolb	97	86.935	ENSEASG00005021531	PAPOLB	93	85.469	Equus_asinus_asinus
MGP_PahariEiJ_G0024534	Papolb	93	78.798	ENSHGLG00000002987	-	98	78.798	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024534	Papolb	99	92.500	ENSJJAG00000012212	Papolb	92	92.500	Jaculus_jaculus
MGP_PahariEiJ_G0024534	Papolb	86	89.818	ENSMFAG00000031074	PAPOLB	99	89.818	Macaca_fascicularis
MGP_PahariEiJ_G0024534	Papolb	99	85.580	ENSMMUG00000043732	PAPOLB	89	86.677	Macaca_mulatta
MGP_PahariEiJ_G0024534	Papolb	100	98.287	MGP_CAROLIEiJ_G0027962	Papolb	100	98.287	Mus_caroli
MGP_PahariEiJ_G0024534	Papolb	100	98.131	ENSMUSG00000074817	Papolb	100	98.131	Mus_musculus
MGP_PahariEiJ_G0024534	Papolb	100	97.975	MGP_SPRETEiJ_G0028966	Papolb	100	97.975	Mus_spretus
MGP_PahariEiJ_G0024534	Papolb	99	84.867	ENSMLUG00000029802	PAPOLB	97	84.867	Myotis_lucifugus
MGP_PahariEiJ_G0024534	Papolb	99	86.875	ENSODEG00000009844	PAPOLB	95	86.875	Octodon_degus
MGP_PahariEiJ_G0024534	Papolb	99	83.489	ENSOCUG00000022988	PAPOLB	100	88.968	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024534	Papolb	99	89.704	ENSOGAG00000031103	PAPOLB	91	89.704	Otolemur_garnettii
MGP_PahariEiJ_G0024534	Papolb	97	86.035	ENSPTRG00000045383	PAPOLB	91	86.035	Pan_troglodytes
MGP_PahariEiJ_G0024534	Papolb	98	88.676	ENSUMAG00000007631	PAPOLB	99	88.676	Ursus_maritimus