EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024597 (Gene tree)
Gene ID: 110339157
Gene Symbol: Gtf3a
Alias: 2010015D03Rik|2610111I01Rik|5330403M05Rik
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 7224 bases
Position: chr23:37015661-37022884
Accession: 110339157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0060419	zf-C2H2	PF00096.26	5.8e-34	1	5
MGP_PahariEiJ_P0060419	zf-C2H2	PF00096.26	5.8e-34	2	5
MGP_PahariEiJ_P0060419	zf-C2H2	PF00096.26	5.8e-34	3	5
MGP_PahariEiJ_P0060419	zf-C2H2	PF00096.26	5.8e-34	4	5
MGP_PahariEiJ_P0060419	zf-C2H2	PF00096.26	5.8e-34	5	5
MGP_PahariEiJ_P0060417	zf-C2H2	PF00096.26	1.2e-33	1	5
MGP_PahariEiJ_P0060417	zf-C2H2	PF00096.26	1.2e-33	2	5
MGP_PahariEiJ_P0060417	zf-C2H2	PF00096.26	1.2e-33	3	5
MGP_PahariEiJ_P0060417	zf-C2H2	PF00096.26	1.2e-33	4	5
MGP_PahariEiJ_P0060417	zf-C2H2	PF00096.26	1.2e-33	5	5
MGP_PahariEiJ_P0060419	zf-met	PF12874.7	0.00021	1	1
MGP_PahariEiJ_P0060417	zf-met	PF12874.7	0.00049	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0060420	-	1699	-	-	- (aa)	-	-
MGP_PahariEiJ_T0060417	-	1305	XM_021222695	MGP_PahariEiJ_P0060417	365 (aa)	XP_021078354	-
MGP_PahariEiJ_T0060418	-	1936	-	-	- (aa)	-	-
MGP_PahariEiJ_T0060419	-	1429	-	MGP_PahariEiJ_P0060419	341 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0024597	Gtf3a	87	37.190	MGP_PahariEiJ_G0025472	Wt1	50	34.286
MGP_PahariEiJ_G0024597	Gtf3a	81	39.130	MGP_PahariEiJ_G0031644	Zic3	60	38.525
MGP_PahariEiJ_G0024597	Gtf3a	78	36.842	MGP_PahariEiJ_G0012839	-	66	36.842
MGP_PahariEiJ_G0024597	Gtf3a	90	37.762	MGP_PahariEiJ_G0022097	Repin1	74	37.584
MGP_PahariEiJ_G0024597	Gtf3a	89	40.964	MGP_PahariEiJ_G0021012	-	68	31.522
MGP_PahariEiJ_G0024597	Gtf3a	84	37.762	MGP_PahariEiJ_G0015756	Zfp748	92	37.762
MGP_PahariEiJ_G0024597	Gtf3a	78	38.400	MGP_PahariEiJ_G0022203	Prdm5	63	38.400
MGP_PahariEiJ_G0024597	Gtf3a	78	35.094	MGP_PahariEiJ_G0021177	Zfp108	56	35.094
MGP_PahariEiJ_G0024597	Gtf3a	81	39.837	MGP_PahariEiJ_G0012663	-	73	33.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024597	Gtf3a	99	79.121	ENSAMEG00000015824	GTF3A	92	83.582	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024597	Gtf3a	93	78.592	ENSBTAG00000012600	GTF3A	93	79.641	Bos_taurus
MGP_PahariEiJ_G0024597	Gtf3a	97	79.718	ENSCAFG00000006794	GTF3A	93	82.111	Canis_familiaris
MGP_PahariEiJ_G0024597	Gtf3a	94	78.882	ENSCHIG00000010341	-	93	79.341	Capra_hircus
MGP_PahariEiJ_G0024597	Gtf3a	94	79.503	ENSCHIG00000021040	-	78	79.940	Capra_hircus
MGP_PahariEiJ_G0024597	Gtf3a	92	75.000	ENSTSYG00000004206	GTF3A	99	75.074	Carlito_syrichta
MGP_PahariEiJ_G0024597	Gtf3a	85	81.176	ENSCAPG00000015862	GTF3A	99	81.176	Cavia_aperea
MGP_PahariEiJ_G0024597	Gtf3a	95	79.511	ENSCPOG00000010143	GTF3A	99	80.428	Cavia_porcellus
MGP_PahariEiJ_G0024597	Gtf3a	92	80.317	ENSCLAG00000003912	GTF3A	96	81.905	Chinchilla_lanigera
MGP_PahariEiJ_G0024597	Gtf3a	99	76.776	ENSDNOG00000037405	-	81	81.050	Dasypus_novemcinctus
MGP_PahariEiJ_G0024597	Gtf3a	73	78.325	ENSETEG00000003225	GTF3A	70	77.033	Echinops_telfairi
MGP_PahariEiJ_G0024597	Gtf3a	99	78.571	ENSEASG00005022495	-	81	78.297	Equus_asinus_asinus
MGP_PahariEiJ_G0024597	Gtf3a	97	69.277	ENSEASG00005013216	-	86	71.385	Equus_asinus_asinus
MGP_PahariEiJ_G0024597	Gtf3a	99	79.396	ENSECAG00000014803	GTF3A	86	78.261	Equus_caballus
MGP_PahariEiJ_G0024597	Gtf3a	91	75.831	ENSECAG00000024825	-	73	77.987	Equus_caballus
MGP_PahariEiJ_G0024597	Gtf3a	99	75.616	ENSEEUG00000004307	GTF3A	82	80.357	Erinaceus_europaeus
MGP_PahariEiJ_G0024597	Gtf3a	99	80.495	ENSFCAG00000006982	GTF3A	79	83.824	Felis_catus
MGP_PahariEiJ_G0024597	Gtf3a	91	83.280	ENSFDAG00000016841	GTF3A	96	83.601	Fukomys_damarensis
MGP_PahariEiJ_G0024597	Gtf3a	91	82.372	ENSHGLG00000004173	GTF3A	97	83.013	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024597	Gtf3a	91	82.372	ENSHGLG00100011561	GTF3A	97	83.013	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024597	Gtf3a	91	82.748	ENSSTOG00000013853	GTF3A	100	83.706	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024597	Gtf3a	90	77.492	ENSJJAG00000011501	Gtf3a	99	76.452	Jaculus_jaculus
MGP_PahariEiJ_G0024597	Gtf3a	99	70.350	ENSLAFG00000027315	GTF3A	94	73.487	Loxodonta_africana
MGP_PahariEiJ_G0024597	Gtf3a	99	85.359	ENSMAUG00000016253	Gtf3a	91	88.131	Mesocricetus_auratus
MGP_PahariEiJ_G0024597	Gtf3a	99	76.986	ENSMICG00000014763	GTF3A	98	77.808	Microcebus_murinus
MGP_PahariEiJ_G0024597	Gtf3a	100	96.712	MGP_CAROLIEiJ_G0028031	Gtf3a	100	96.712	Mus_caroli
MGP_PahariEiJ_G0024597	Gtf3a	100	96.712	ENSMUSG00000016503	Gtf3a	100	96.712	Mus_musculus
MGP_PahariEiJ_G0024597	Gtf3a	100	96.438	MGP_SPRETEiJ_G0029029	Gtf3a	100	96.438	Mus_spretus
MGP_PahariEiJ_G0024597	Gtf3a	99	78.571	ENSMPUG00000005835	GTF3A	92	82.006	Mustela_putorius_furo
MGP_PahariEiJ_G0024597	Gtf3a	91	83.686	ENSMLUG00000002158	GTF3A	99	83.686	Myotis_lucifugus
MGP_PahariEiJ_G0024597	Gtf3a	99	77.869	ENSNLEG00000000331	GTF3A	93	81.287	Nomascus_leucogenys
MGP_PahariEiJ_G0024597	Gtf3a	89	55.385	ENSMEUG00000010089	GTF3A	92	56.051	Notamacropus_eugenii
MGP_PahariEiJ_G0024597	Gtf3a	92	74.107	ENSOPRG00000000854	-	83	74.107	Ochotona_princeps
MGP_PahariEiJ_G0024597	Gtf3a	97	77.311	ENSODEG00000006725	GTF3A	80	80.702	Octodon_degus
MGP_PahariEiJ_G0024597	Gtf3a	99	77.961	ENSOCUG00000011713	GTF3A	76	82.090	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024597	Gtf3a	99	77.322	ENSOGAG00000014589	GTF3A	99	77.869	Otolemur_garnettii
MGP_PahariEiJ_G0024597	Gtf3a	94	74.224	ENSOARG00000012551	GTF3A	91	74.850	Ovis_aries
MGP_PahariEiJ_G0024597	Gtf3a	99	80.220	ENSPPRG00000002368	GTF3A	99	79.945	Panthera_pardus
MGP_PahariEiJ_G0024597	Gtf3a	90	79.933	ENSPTIG00000018958	GTF3A	81	79.599	Panthera_tigris_altaica
MGP_PahariEiJ_G0024597	Gtf3a	90	51.923	ENSPSIG00000011722	GTF3A	84	56.957	Pelodiscus_sinensis
MGP_PahariEiJ_G0024597	Gtf3a	98	77.839	ENSPPYG00000005235	GTF3A	99	77.839	Pongo_abelii
MGP_PahariEiJ_G0024597	Gtf3a	99	75.342	ENSPCOG00000016742	GTF3A	76	81.306	Propithecus_coquereli
MGP_PahariEiJ_G0024597	Gtf3a	99	75.275	ENSPVAG00000012837	GTF3A	79	80.645	Pteropus_vampyrus
MGP_PahariEiJ_G0024597	Gtf3a	99	71.585	ENSRROG00000043264	GTF3A	91	75.595	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024597	Gtf3a	89	74.154	ENSSHAG00000016965	GTF3A	90	76.508	Sarcophilus_harrisii
MGP_PahariEiJ_G0024597	Gtf3a	91	70.740	ENSSARG00000010692	GTF3A	86	71.383	Sorex_araneus
MGP_PahariEiJ_G0024597	Gtf3a	93	66.962	ENSSPUG00000005307	GTF3A	88	68.788	Sphenodon_punctatus
MGP_PahariEiJ_G0024597	Gtf3a	77	46.992	ENSTRUG00000005241	gtf3ab	86	45.548	Takifugu_rubripes
MGP_PahariEiJ_G0024597	Gtf3a	80	85.306	ENSTBEG00000012075	GTF3A	61	84.436	Tupaia_belangeri
MGP_PahariEiJ_G0024597	Gtf3a	99	72.176	ENSTTRG00000008538	GTF3A	82	75.588	Tursiops_truncatus
MGP_PahariEiJ_G0024597	Gtf3a	99	79.396	ENSUAMG00000019189	GTF3A	92	83.881	Ursus_americanus
MGP_PahariEiJ_G0024597	Gtf3a	88	83.389	ENSUMAG00000016941	GTF3A	100	83.389	Ursus_maritimus
MGP_PahariEiJ_G0024597	Gtf3a	78	85.232	ENSVPAG00000004995	GTF3A	92	84.000	Vicugna_pacos
MGP_PahariEiJ_G0024597	Gtf3a	99	77.808	ENSVVUG00000009197	GTF3A	99	77.534	Vulpes_vulpes