EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024826 (Gene tree)
Gene ID: 110318904
Gene Symbol: Trub2
Alias: G430055L02Rik
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 29502 bases
Position: chr3:17026773-17056274
Accession: 110318904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0061676	TruB_N	PF01509.18	6.4e-26	1	1
MGP_PahariEiJ_P0061674	TruB_N	PF01509.18	3.6e-13	1	1
MGP_PahariEiJ_P0061678	TruB_N	PF01509.18	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0061677	-	763	-	MGP_PahariEiJ_P0061677	121 (aa)	-	-
MGP_PahariEiJ_T0061676	-	2994	-	MGP_PahariEiJ_P0061676	331 (aa)	XP_021049895	UPI000A30726A
MGP_PahariEiJ_T0061674	-	974	-	MGP_PahariEiJ_P0061674	204 (aa)	-	-
MGP_PahariEiJ_T0061679	-	807	-	MGP_PahariEiJ_P0061679	121 (aa)	-	-
MGP_PahariEiJ_T0061678	-	744	-	MGP_PahariEiJ_P0061678	194 (aa)	-	-
MGP_PahariEiJ_T0061682	-	491	-	-	- (aa)	-	-
MGP_PahariEiJ_T0061683	-	383	-	-	- (aa)	-	-
MGP_PahariEiJ_T0061680	-	415	-	-	- (aa)	-	-
MGP_PahariEiJ_T0061681	-	746	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024826	Trub2	100	81.873	ENSG00000167112	TRUB2	100	81.873	Homo_sapiens
MGP_PahariEiJ_G0024826	Trub2	84	42.806	ENSAPOG00000018284	-	76	56.934	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024826	Trub2	62	56.585	ENSAPOG00000015733	trub2	74	56.585	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024826	Trub2	99	80.606	ENSAMEG00000015395	TRUB2	99	80.606	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024826	Trub2	88	48.837	ENSACIG00000016500	trub2	85	51.971	Amphilophus_citrinellus
MGP_PahariEiJ_G0024826	Trub2	88	52.023	ENSAOCG00000002330	trub2	82	55.556	Amphiprion_ocellaris
MGP_PahariEiJ_G0024826	Trub2	88	52.601	ENSAPEG00000013177	trub2	82	55.914	Amphiprion_percula
MGP_PahariEiJ_G0024826	Trub2	88	52.326	ENSATEG00000011371	trub2	88	54.643	Anabas_testudineus
MGP_PahariEiJ_G0024826	Trub2	89	57.475	ENSAPLG00000009254	TRUB2	95	57.947	Anas_platyrhynchos
MGP_PahariEiJ_G0024826	Trub2	92	63.399	ENSACAG00000007331	TRUB2	92	63.399	Anolis_carolinensis
MGP_PahariEiJ_G0024826	Trub2	94	83.280	ENSANAG00000036234	TRUB2	100	83.280	Aotus_nancymaae
MGP_PahariEiJ_G0024826	Trub2	88	50.000	ENSACLG00000010793	trub2	85	52.500	Astatotilapia_calliptera
MGP_PahariEiJ_G0024826	Trub2	93	53.571	ENSAMXG00000031679	trub2	88	53.571	Astyanax_mexicanus
MGP_PahariEiJ_G0024826	Trub2	85	81.707	ENSBTAG00000004663	TRUB2	100	81.707	Bos_taurus
MGP_PahariEiJ_G0024826	Trub2	53	79.096	ENSBTAG00000055269	-	80	79.096	Bos_taurus
MGP_PahariEiJ_G0024826	Trub2	100	81.571	ENSCJAG00000020009	TRUB2	100	81.571	Callithrix_jacchus
MGP_PahariEiJ_G0024826	Trub2	100	80.060	ENSCAFG00000020068	TRUB2	100	80.060	Canis_familiaris
MGP_PahariEiJ_G0024826	Trub2	92	83.146	ENSCAFG00020017325	-	100	83.708	Canis_lupus_dingo
MGP_PahariEiJ_G0024826	Trub2	100	80.665	ENSCHIG00000021160	TRUB2	100	80.665	Capra_hircus
MGP_PahariEiJ_G0024826	Trub2	99	83.792	ENSTSYG00000034163	TRUB2	99	83.792	Carlito_syrichta
MGP_PahariEiJ_G0024826	Trub2	89	79.592	ENSCAPG00000000223	TRUB2	100	84.076	Cavia_aperea
MGP_PahariEiJ_G0024826	Trub2	100	80.060	ENSCPOG00000013535	TRUB2	100	84.536	Cavia_porcellus
MGP_PahariEiJ_G0024826	Trub2	98	78.462	ENSCCAG00000028463	-	98	77.778	Cebus_capucinus
MGP_PahariEiJ_G0024826	Trub2	97	81.562	ENSCCAG00000026531	-	98	81.562	Cebus_capucinus
MGP_PahariEiJ_G0024826	Trub2	100	80.967	ENSCATG00000038234	TRUB2	100	80.967	Cercocebus_atys
MGP_PahariEiJ_G0024826	Trub2	100	82.474	ENSCLAG00000001702	TRUB2	99	82.474	Chinchilla_lanigera
MGP_PahariEiJ_G0024826	Trub2	100	76.506	ENSCSAG00000014117	TRUB2	100	76.506	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024826	Trub2	100	80.060	ENSCHOG00000001555	TRUB2	100	80.060	Choloepus_hoffmanni
MGP_PahariEiJ_G0024826	Trub2	90	63.545	ENSCPBG00000025186	TRUB2	88	63.545	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024826	Trub2	87	34.483	ENSCSAVG00000003930	-	92	32.673	Ciona_savignyi
MGP_PahariEiJ_G0024826	Trub2	100	73.414	ENSCANG00000016135	TRUB2	100	73.414	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024826	Trub2	100	88.520	ENSCGRG00001024441	Trub2	100	88.520	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024826	Trub2	100	88.520	ENSCGRG00000005633	Trub2	100	88.520	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024826	Trub2	88	49.419	ENSCSEG00000001331	trub2	83	51.613	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024826	Trub2	87	50.296	ENSCVAG00000009901	trub2	83	53.430	Cyprinodon_variegatus
MGP_PahariEiJ_G0024826	Trub2	88	54.386	ENSDARG00000028379	trub2	79	53.957	Danio_rerio
MGP_PahariEiJ_G0024826	Trub2	91	56.954	ENSDNOG00000043967	-	92	56.954	Dasypus_novemcinctus
MGP_PahariEiJ_G0024826	Trub2	99	78.963	ENSDNOG00000045679	-	99	78.963	Dasypus_novemcinctus
MGP_PahariEiJ_G0024826	Trub2	100	80.723	ENSDORG00000016222	Trub2	98	83.067	Dipodomys_ordii
MGP_PahariEiJ_G0024826	Trub2	90	32.013	FBgn0033060	CG7849	91	32.013	Drosophila_melanogaster
MGP_PahariEiJ_G0024826	Trub2	95	79.233	ENSETEG00000009114	TRUB2	96	79.233	Echinops_telfairi
MGP_PahariEiJ_G0024826	Trub2	87	37.363	ENSEBUG00000015723	trub2	85	43.421	Eptatretus_burgeri
MGP_PahariEiJ_G0024826	Trub2	100	81.269	ENSEASG00005016819	TRUB2	100	81.269	Equus_asinus_asinus
MGP_PahariEiJ_G0024826	Trub2	100	81.873	ENSECAG00000023520	TRUB2	100	81.873	Equus_caballus
MGP_PahariEiJ_G0024826	Trub2	99	81.651	ENSEEUG00000008908	TRUB2	99	81.651	Erinaceus_europaeus
MGP_PahariEiJ_G0024826	Trub2	88	51.087	ENSELUG00000002376	trub2	91	53.608	Esox_lucius
MGP_PahariEiJ_G0024826	Trub2	100	79.880	ENSFCAG00000005839	TRUB2	100	79.880	Felis_catus
MGP_PahariEiJ_G0024826	Trub2	80	62.121	ENSFALG00000001364	TRUB2	85	62.879	Ficedula_albicollis
MGP_PahariEiJ_G0024826	Trub2	100	81.443	ENSFDAG00000021374	TRUB2	100	81.443	Fukomys_damarensis
MGP_PahariEiJ_G0024826	Trub2	93	44.949	ENSFHEG00000014655	trub2	85	48.097	Fundulus_heteroclitus
MGP_PahariEiJ_G0024826	Trub2	83	45.290	ENSGMOG00000000981	trub2	92	45.290	Gadus_morhua
MGP_PahariEiJ_G0024826	Trub2	90	60.738	ENSGALG00000004920	TRUB2	73	60.738	Gallus_gallus
MGP_PahariEiJ_G0024826	Trub2	87	51.176	ENSGAFG00000010107	trub2	88	51.525	Gambusia_affinis
MGP_PahariEiJ_G0024826	Trub2	97	49.689	ENSGACG00000001476	trub2	95	49.689	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024826	Trub2	88	65.979	ENSGAGG00000022872	TRUB2	86	65.979	Gopherus_agassizii
MGP_PahariEiJ_G0024826	Trub2	100	81.873	ENSGGOG00000014780	TRUB2	100	81.873	Gorilla_gorilla
MGP_PahariEiJ_G0024826	Trub2	88	50.000	ENSHBUG00000022384	trub2	85	53.214	Haplochromis_burtoni
MGP_PahariEiJ_G0024826	Trub2	99	80.909	ENSHGLG00000016715	TRUB2	99	80.909	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024826	Trub2	99	80.909	ENSHGLG00100016548	TRUB2	99	80.909	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024826	Trub2	89	50.575	ENSHCOG00000017748	trub2	85	53.957	Hippocampus_comes
MGP_PahariEiJ_G0024826	Trub2	89	51.864	ENSIPUG00000017725	hdhd3	51	51.864	Ictalurus_punctatus
MGP_PahariEiJ_G0024826	Trub2	99	80.734	ENSSTOG00000022617	-	99	80.734	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024826	Trub2	100	80.665	ENSSTOG00000008024	-	100	81.443	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024826	Trub2	99	75.988	ENSJJAG00000019181	Trub2	99	75.988	Jaculus_jaculus
MGP_PahariEiJ_G0024826	Trub2	87	49.412	ENSKMAG00000007861	trub2	83	52.708	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024826	Trub2	89	52.874	ENSLBEG00000000907	trub2	83	54.093	Labrus_bergylta
MGP_PahariEiJ_G0024826	Trub2	89	62.457	ENSLACG00000001515	TRUB2	87	62.457	Latimeria_chalumnae
MGP_PahariEiJ_G0024826	Trub2	87	56.395	ENSLOCG00000000885	trub2	95	56.014	Lepisosteus_oculatus
MGP_PahariEiJ_G0024826	Trub2	92	82.838	ENSLAFG00000002174	TRUB2	100	82.838	Loxodonta_africana
MGP_PahariEiJ_G0024826	Trub2	100	80.665	ENSMFAG00000000881	TRUB2	100	80.665	Macaca_fascicularis
MGP_PahariEiJ_G0024826	Trub2	100	80.363	ENSMMUG00000014146	TRUB2	100	80.363	Macaca_mulatta
MGP_PahariEiJ_G0024826	Trub2	100	80.363	ENSMNEG00000011189	TRUB2	100	80.363	Macaca_nemestrina
MGP_PahariEiJ_G0024826	Trub2	100	80.665	ENSMLEG00000037270	TRUB2	100	80.665	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024826	Trub2	88	52.023	ENSMAMG00000023643	trub2	92	55.197	Mastacembelus_armatus
MGP_PahariEiJ_G0024826	Trub2	88	50.000	ENSMZEG00005016018	trub2	85	52.857	Maylandia_zebra
MGP_PahariEiJ_G0024826	Trub2	60	66.000	ENSMGAG00000003894	TRUB2	100	66.000	Meleagris_gallopavo
MGP_PahariEiJ_G0024826	Trub2	100	91.753	ENSMAUG00000010403	Trub2	100	91.753	Mesocricetus_auratus
MGP_PahariEiJ_G0024826	Trub2	100	80.665	ENSMICG00000047032	TRUB2	100	80.665	Microcebus_murinus
MGP_PahariEiJ_G0024826	Trub2	100	87.255	ENSMOCG00000014291	Trub2	100	90.820	Microtus_ochrogaster
MGP_PahariEiJ_G0024826	Trub2	88	54.335	ENSMMOG00000021674	trub2	86	54.839	Mola_mola
MGP_PahariEiJ_G0024826	Trub2	88	73.630	ENSMODG00000005940	TRUB2	99	73.630	Monodelphis_domestica
MGP_PahariEiJ_G0024826	Trub2	91	53.595	ENSMALG00000021231	trub2	89	53.595	Monopterus_albus
MGP_PahariEiJ_G0024826	Trub2	100	96.392	MGP_CAROLIEiJ_G0023368	Trub2	100	96.392	Mus_caroli
MGP_PahariEiJ_G0024826	Trub2	100	96.907	ENSMUSG00000039826	Trub2	100	96.907	Mus_musculus
MGP_PahariEiJ_G0024826	Trub2	100	96.907	MGP_SPRETEiJ_G0024286	Trub2	100	96.907	Mus_spretus
MGP_PahariEiJ_G0024826	Trub2	100	78.550	ENSMPUG00000013206	TRUB2	91	78.550	Mustela_putorius_furo
MGP_PahariEiJ_G0024826	Trub2	99	81.515	ENSMLUG00000005256	TRUB2	99	81.515	Myotis_lucifugus
MGP_PahariEiJ_G0024826	Trub2	100	84.592	ENSNGAG00000018679	Trub2	100	84.592	Nannospalax_galili
MGP_PahariEiJ_G0024826	Trub2	88	50.581	ENSNBRG00000016294	trub2	85	52.857	Neolamprologus_brichardi
MGP_PahariEiJ_G0024826	Trub2	100	80.363	ENSNLEG00000017556	TRUB2	100	80.363	Nomascus_leucogenys
MGP_PahariEiJ_G0024826	Trub2	91	73.841	ENSMEUG00000000484	TRUB2	97	73.841	Notamacropus_eugenii
MGP_PahariEiJ_G0024826	Trub2	99	78.485	ENSOPRG00000001981	TRUB2	100	78.485	Ochotona_princeps
MGP_PahariEiJ_G0024826	Trub2	100	82.990	ENSODEG00000017292	TRUB2	99	82.990	Octodon_degus
MGP_PahariEiJ_G0024826	Trub2	88	49.708	ENSONIG00000004230	trub2	85	52.330	Oreochromis_niloticus
MGP_PahariEiJ_G0024826	Trub2	73	78.169	ENSOANG00000029023	-	83	77.540	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0024826	Trub2	99	79.939	ENSOCUG00000026296	TRUB2	91	80.060	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024826	Trub2	88	49.123	ENSORLG00000020011	trub2	84	52.143	Oryzias_latipes
MGP_PahariEiJ_G0024826	Trub2	88	49.412	ENSORLG00020011028	trub2	82	52.330	Oryzias_latipes_hni
MGP_PahariEiJ_G0024826	Trub2	88	49.412	ENSORLG00015007494	trub2	86	52.330	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024826	Trub2	88	51.744	ENSOMEG00000006702	trub2	84	53.957	Oryzias_melastigma
MGP_PahariEiJ_G0024826	Trub2	80	80.769	ENSOGAG00000003511	-	95	80.769	Otolemur_garnettii
MGP_PahariEiJ_G0024826	Trub2	76	78.968	ENSOARG00000003785	-	100	78.968	Ovis_aries
MGP_PahariEiJ_G0024826	Trub2	100	80.060	ENSOARG00000010579	-	100	80.060	Ovis_aries
MGP_PahariEiJ_G0024826	Trub2	100	81.873	ENSPPAG00000043146	TRUB2	100	81.873	Pan_paniscus
MGP_PahariEiJ_G0024826	Trub2	100	79.880	ENSPPRG00000006307	TRUB2	100	79.880	Panthera_pardus
MGP_PahariEiJ_G0024826	Trub2	100	79.580	ENSPTIG00000012366	TRUB2	100	79.580	Panthera_tigris_altaica
MGP_PahariEiJ_G0024826	Trub2	100	81.571	ENSPTRG00000052151	-	100	81.571	Pan_troglodytes
MGP_PahariEiJ_G0024826	Trub2	100	81.571	ENSPTRG00000021423	TRUB2	100	81.571	Pan_troglodytes
MGP_PahariEiJ_G0024826	Trub2	100	80.967	ENSPANG00000025856	TRUB2	100	80.967	Papio_anubis
MGP_PahariEiJ_G0024826	Trub2	87	53.529	ENSPKIG00000019769	trub2	90	53.986	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024826	Trub2	90	60.738	ENSPSIG00000015701	TRUB2	98	60.738	Pelodiscus_sinensis
MGP_PahariEiJ_G0024826	Trub2	92	49.724	ENSPMGG00000010206	trub2	90	51.220	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024826	Trub2	100	88.554	ENSPEMG00000017893	Trub2	100	88.554	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024826	Trub2	95	73.163	ENSPCIG00000026731	TRUB2	99	73.163	Phascolarctos_cinereus
MGP_PahariEiJ_G0024826	Trub2	88	50.877	ENSPFOG00000018018	trub2	77	51.701	Poecilia_formosa
MGP_PahariEiJ_G0024826	Trub2	88	50.292	ENSPLAG00000010484	trub2	84	51.361	Poecilia_latipinna
MGP_PahariEiJ_G0024826	Trub2	88	51.546	ENSPMEG00000012913	trub2	86	51.546	Poecilia_mexicana
MGP_PahariEiJ_G0024826	Trub2	87	49.412	ENSPREG00000002549	trub2	82	52.158	Poecilia_reticulata
MGP_PahariEiJ_G0024826	Trub2	98	81.288	ENSPPYG00000019650	TRUB2	100	81.288	Pongo_abelii
MGP_PahariEiJ_G0024826	Trub2	100	79.758	ENSPCAG00000015068	TRUB2	100	79.758	Procavia_capensis
MGP_PahariEiJ_G0024826	Trub2	100	80.967	ENSPCOG00000017100	TRUB2	100	80.967	Propithecus_coquereli
MGP_PahariEiJ_G0024826	Trub2	90	82.492	ENSPVAG00000001224	TRUB2	99	82.492	Pteropus_vampyrus
MGP_PahariEiJ_G0024826	Trub2	88	50.000	ENSPNYG00000013666	trub2	85	52.857	Pundamilia_nyererei
MGP_PahariEiJ_G0024826	Trub2	98	49.538	ENSPNAG00000017292	trub2	92	49.538	Pygocentrus_nattereri
MGP_PahariEiJ_G0024826	Trub2	95	91.772	ENSRNOG00000043189	Trub2	98	91.772	Rattus_norvegicus
MGP_PahariEiJ_G0024826	Trub2	100	74.018	ENSRBIG00000006965	TRUB2	100	74.018	Rhinopithecus_bieti
MGP_PahariEiJ_G0024826	Trub2	100	81.873	ENSRROG00000042928	TRUB2	100	81.873	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024826	Trub2	100	80.967	ENSSBOG00000022439	TRUB2	100	80.967	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024826	Trub2	87	53.254	ENSSFOG00015013391	trub2	89	55.755	Scleropages_formosus
MGP_PahariEiJ_G0024826	Trub2	95	51.582	ENSSMAG00000020820	trub2	95	51.582	Scophthalmus_maximus
MGP_PahariEiJ_G0024826	Trub2	88	50.867	ENSSDUG00000016928	trub2	83	53.763	Seriola_dumerili
MGP_PahariEiJ_G0024826	Trub2	88	50.867	ENSSLDG00000024701	trub2	83	53.763	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024826	Trub2	90	59.468	ENSSPUG00000015515	TRUB2	90	59.468	Sphenodon_punctatus
MGP_PahariEiJ_G0024826	Trub2	84	55.914	ENSSPAG00000017865	trub2	84	55.914	Stegastes_partitus
MGP_PahariEiJ_G0024826	Trub2	100	81.571	ENSSSCG00000005645	TRUB2	99	81.017	Sus_scrofa
MGP_PahariEiJ_G0024826	Trub2	79	64.122	ENSTGUG00000003704	TRUB2	100	64.122	Taeniopygia_guttata
MGP_PahariEiJ_G0024826	Trub2	90	47.667	ENSTRUG00000015499	trub2	91	47.667	Takifugu_rubripes
MGP_PahariEiJ_G0024826	Trub2	89	48.864	ENSTNIG00000014721	trub2	96	52.313	Tetraodon_nigroviridis
MGP_PahariEiJ_G0024826	Trub2	68	76.889	ENSTBEG00000000586	TRUB2	100	76.889	Tupaia_belangeri
MGP_PahariEiJ_G0024826	Trub2	100	77.039	ENSTTRG00000016486	TRUB2	100	77.039	Tursiops_truncatus
MGP_PahariEiJ_G0024826	Trub2	99	80.000	ENSUAMG00000020276	TRUB2	96	80.000	Ursus_americanus
MGP_PahariEiJ_G0024826	Trub2	99	80.000	ENSUMAG00000022051	TRUB2	96	80.000	Ursus_maritimus
MGP_PahariEiJ_G0024826	Trub2	91	72.316	ENSVPAG00000005793	TRUB2	99	61.783	Vicugna_pacos
MGP_PahariEiJ_G0024826	Trub2	92	83.708	ENSVVUG00000013451	TRUB2	86	82.566	Vulpes_vulpes
MGP_PahariEiJ_G0024826	Trub2	87	60.947	ENSXETG00000003973	trub2	85	64.130	Xenopus_tropicalis
MGP_PahariEiJ_G0024826	Trub2	87	51.765	ENSXCOG00000008759	trub2	83	53.237	Xiphophorus_couchianus
MGP_PahariEiJ_G0024826	Trub2	87	51.176	ENSXMAG00000015478	trub2	83	53.237	Xiphophorus_maculatus