EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0024872 (Gene tree)
Gene ID: 110318647
Gene Symbol: Exosc2
Alias: Rrp4
Full Name: exosome component 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 10148 bases
Position: chr3:18948124-18958271
Accession: 110318647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0061996	ECR1_N	PF14382.6	5e-15	1	1
MGP_PahariEiJ_P0061994	ECR1_N	PF14382.6	6.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0061998	-	549	-	-	- (aa)	-	-
MGP_PahariEiJ_T0061999	-	476	-	-	- (aa)	-	-
MGP_PahariEiJ_T0061996	-	747	XM_021193839	MGP_PahariEiJ_P0061996	247 (aa)	XP_021049498	-
MGP_PahariEiJ_T0061997	-	517	-	MGP_PahariEiJ_P0061997	74 (aa)	-	UPI00053BD723
MGP_PahariEiJ_T0061994	-	1477	-	MGP_PahariEiJ_P0061994	293 (aa)	XP_021049496	UPI000A30AD72
MGP_PahariEiJ_T0061995	-	2084	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0024872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0024872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSG00000130713	EXOSC2	100	94.198	Homo_sapiens
MGP_PahariEiJ_G0024872	Exosc2	96	73.239	ENSAPOG00000008861	exosc2	97	76.604	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSAMEG00000016239	EXOSC2	100	94.198	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0024872	Exosc2	100	76.109	ENSACIG00000019054	exosc2	100	76.109	Amphilophus_citrinellus
MGP_PahariEiJ_G0024872	Exosc2	100	76.792	ENSAOCG00000004983	exosc2	100	76.792	Amphiprion_ocellaris
MGP_PahariEiJ_G0024872	Exosc2	100	76.792	ENSAOCG00000008577	exosc2	100	76.792	Amphiprion_ocellaris
MGP_PahariEiJ_G0024872	Exosc2	100	76.792	ENSAPEG00000014088	exosc2	100	76.792	Amphiprion_percula
MGP_PahariEiJ_G0024872	Exosc2	100	77.133	ENSATEG00000018680	exosc2	100	77.133	Anabas_testudineus
MGP_PahariEiJ_G0024872	Exosc2	96	89.007	ENSAPLG00000012516	EXOSC2	97	89.007	Anas_platyrhynchos
MGP_PahariEiJ_G0024872	Exosc2	99	83.904	ENSACAG00000002706	EXOSC2	99	83.904	Anolis_carolinensis
MGP_PahariEiJ_G0024872	Exosc2	100	75.427	ENSACLG00000013613	exosc2	100	75.427	Astatotilapia_calliptera
MGP_PahariEiJ_G0024872	Exosc2	100	81.017	ENSAMXG00000042605	exosc2	100	81.017	Astyanax_mexicanus
MGP_PahariEiJ_G0024872	Exosc2	100	97.297	ENSBTAG00000048071	EXOSC2	100	94.881	Bos_taurus
MGP_PahariEiJ_G0024872	Exosc2	99	40.604	WBGene00022232	exos-2	98	40.604	Caenorhabditis_elegans
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSCJAG00000020537	EXOSC2	100	94.198	Callithrix_jacchus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSCAFG00000019941	EXOSC2	99	93.151	Canis_familiaris
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSCAFG00020024047	EXOSC2	100	93.174	Canis_lupus_dingo
MGP_PahariEiJ_G0024872	Exosc2	100	97.297	ENSCHIG00000021398	EXOSC2	100	95.222	Capra_hircus
MGP_PahariEiJ_G0024872	Exosc2	100	95.946	ENSTSYG00000001805	EXOSC2	100	94.539	Carlito_syrichta
MGP_PahariEiJ_G0024872	Exosc2	100	90.444	ENSCPOG00000005902	EXOSC2	100	90.444	Cavia_porcellus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSCCAG00000019749	EXOSC2	100	94.198	Cebus_capucinus
MGP_PahariEiJ_G0024872	Exosc2	100	94.737	ENSCATG00000025389	-	100	94.539	Cercocebus_atys
MGP_PahariEiJ_G0024872	Exosc2	100	95.547	ENSCLAG00000006195	EXOSC2	100	95.547	Chinchilla_lanigera
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSCSAG00000014760	EXOSC2	100	94.539	Chlorocebus_sabaeus
MGP_PahariEiJ_G0024872	Exosc2	100	92.833	ENSCHOG00000000858	EXOSC2	100	92.833	Choloepus_hoffmanni
MGP_PahariEiJ_G0024872	Exosc2	99	85.959	ENSCPBG00000022626	EXOSC2	99	85.959	Chrysemys_picta_bellii
MGP_PahariEiJ_G0024872	Exosc2	96	60.279	ENSCING00000014934	-	94	60.279	Ciona_intestinalis
MGP_PahariEiJ_G0024872	Exosc2	100	56.410	ENSCSAVG00000003684	-	100	63.406	Ciona_savignyi
MGP_PahariEiJ_G0024872	Exosc2	100	94.737	ENSCANG00000039828	-	100	94.539	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024872	Exosc2	99	86.301	ENSCANG00000029298	-	99	86.301	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0024872	Exosc2	100	98.976	ENSCGRG00001013981	Exosc2	100	98.976	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0024872	Exosc2	100	99.190	ENSCGRG00000017629	Exosc2	100	99.190	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0024872	Exosc2	100	76.451	ENSCSEG00000016539	exosc2	100	76.451	Cynoglossus_semilaevis
MGP_PahariEiJ_G0024872	Exosc2	100	75.085	ENSCVAG00000022260	exosc2	100	75.085	Cyprinodon_variegatus
MGP_PahariEiJ_G0024872	Exosc2	100	78.305	ENSDARG00000028688	exosc2	100	78.305	Danio_rerio
MGP_PahariEiJ_G0024872	Exosc2	100	93.243	ENSDNOG00000025767	-	100	94.382	Dasypus_novemcinctus
MGP_PahariEiJ_G0024872	Exosc2	100	94.198	ENSDORG00000009238	Exosc2	100	94.198	Dipodomys_ordii
MGP_PahariEiJ_G0024872	Exosc2	93	57.664	FBgn0034879	Rrp4	92	58.029	Drosophila_melanogaster
MGP_PahariEiJ_G0024872	Exosc2	95	76.534	ENSETEG00000016130	-	100	76.534	Echinops_telfairi
MGP_PahariEiJ_G0024872	Exosc2	100	95.946	ENSEASG00005008475	EXOSC2	86	95.563	Equus_asinus_asinus
MGP_PahariEiJ_G0024872	Exosc2	100	95.946	ENSECAG00000007897	EXOSC2	86	95.563	Equus_caballus
MGP_PahariEiJ_G0024872	Exosc2	100	77.627	ENSELUG00000013641	exosc2	100	77.627	Esox_lucius
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSFCAG00000025936	EXOSC2	100	93.857	Felis_catus
MGP_PahariEiJ_G0024872	Exosc2	98	84.321	ENSFALG00000001446	EXOSC2	98	84.321	Ficedula_albicollis
MGP_PahariEiJ_G0024872	Exosc2	100	93.522	ENSFDAG00000017196	EXOSC2	100	93.522	Fukomys_damarensis
MGP_PahariEiJ_G0024872	Exosc2	100	75.768	ENSFHEG00000018571	exosc2	100	75.768	Fundulus_heteroclitus
MGP_PahariEiJ_G0024872	Exosc2	100	72.355	ENSGMOG00000011785	exosc2	99	72.355	Gadus_morhua
MGP_PahariEiJ_G0024872	Exosc2	99	87.329	ENSGALG00000040373	EXOSC2	99	87.329	Gallus_gallus
MGP_PahariEiJ_G0024872	Exosc2	99	74.658	ENSGAFG00000010283	exosc2	99	74.658	Gambusia_affinis
MGP_PahariEiJ_G0024872	Exosc2	100	75.427	ENSGACG00000016805	exosc2	99	77.108	Gasterosteus_aculeatus
MGP_PahariEiJ_G0024872	Exosc2	87	89.020	ENSGAGG00000021026	EXOSC2	96	89.020	Gopherus_agassizii
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSGGOG00000010578	EXOSC2	100	93.515	Gorilla_gorilla
MGP_PahariEiJ_G0024872	Exosc2	100	76.109	ENSHBUG00000022437	exosc2	100	76.109	Haplochromis_burtoni
MGP_PahariEiJ_G0024872	Exosc2	100	95.142	ENSHGLG00000012834	EXOSC2	100	95.142	Heterocephalus_glaber_female
MGP_PahariEiJ_G0024872	Exosc2	100	95.142	ENSHGLG00100007092	EXOSC2	100	95.142	Heterocephalus_glaber_male
MGP_PahariEiJ_G0024872	Exosc2	100	75.427	ENSHCOG00000019130	exosc2	100	75.427	Hippocampus_comes
MGP_PahariEiJ_G0024872	Exosc2	100	78.231	ENSIPUG00000015397	exosc2	100	78.231	Ictalurus_punctatus
MGP_PahariEiJ_G0024872	Exosc2	100	94.881	ENSSTOG00000005999	EXOSC2	100	94.881	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0024872	Exosc2	100	97.297	ENSJJAG00000003188	Exosc2	100	95.904	Jaculus_jaculus
MGP_PahariEiJ_G0024872	Exosc2	99	75.685	ENSKMAG00000017397	exosc2	99	75.685	Kryptolebias_marmoratus
MGP_PahariEiJ_G0024872	Exosc2	100	75.427	ENSLBEG00000019269	exosc2	100	75.427	Labrus_bergylta
MGP_PahariEiJ_G0024872	Exosc2	100	82.993	ENSLACG00000015530	EXOSC2	100	82.993	Latimeria_chalumnae
MGP_PahariEiJ_G0024872	Exosc2	100	94.218	ENSLAFG00000006984	EXOSC2	100	94.218	Loxodonta_africana
MGP_PahariEiJ_G0024872	Exosc2	100	94.737	ENSMFAG00000000597	-	100	94.539	Macaca_fascicularis
MGP_PahariEiJ_G0024872	Exosc2	100	80.205	ENSMFAG00000034160	-	84	80.205	Macaca_fascicularis
MGP_PahariEiJ_G0024872	Exosc2	100	94.332	ENSMMUG00000012498	EXOSC2	100	91.468	Macaca_mulatta
MGP_PahariEiJ_G0024872	Exosc2	100	80.887	ENSMNEG00000028704	-	91	80.887	Macaca_nemestrina
MGP_PahariEiJ_G0024872	Exosc2	100	94.737	ENSMNEG00000031861	-	100	94.539	Macaca_nemestrina
MGP_PahariEiJ_G0024872	Exosc2	100	94.737	ENSMLEG00000042587	-	100	94.539	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024872	Exosc2	100	79.863	ENSMLEG00000029891	-	91	79.863	Mandrillus_leucophaeus
MGP_PahariEiJ_G0024872	Exosc2	100	76.451	ENSMAMG00000012466	exosc2	100	76.451	Mastacembelus_armatus
MGP_PahariEiJ_G0024872	Exosc2	100	74.744	ENSMZEG00005018737	exosc2	100	74.744	Maylandia_zebra
MGP_PahariEiJ_G0024872	Exosc2	99	86.644	ENSMGAG00000005450	EXOSC2	99	86.644	Meleagris_gallopavo
MGP_PahariEiJ_G0024872	Exosc2	100	98.785	ENSMAUG00000008299	Exosc2	100	98.785	Mesocricetus_auratus
MGP_PahariEiJ_G0024872	Exosc2	100	95.946	ENSMICG00000015495	EXOSC2	100	95.222	Microcebus_murinus
MGP_PahariEiJ_G0024872	Exosc2	100	98.785	ENSMOCG00000008262	Exosc2	100	98.785	Microtus_ochrogaster
MGP_PahariEiJ_G0024872	Exosc2	100	76.792	ENSMMOG00000009616	exosc2	100	76.792	Mola_mola
MGP_PahariEiJ_G0024872	Exosc2	100	91.126	ENSMODG00000012114	EXOSC2	100	91.126	Monodelphis_domestica
MGP_PahariEiJ_G0024872	Exosc2	100	76.792	ENSMALG00000022132	exosc2	100	76.792	Monopterus_albus
MGP_PahariEiJ_G0024872	Exosc2	100	100.000	MGP_CAROLIEiJ_G0023415	Exosc2	100	100.000	Mus_caroli
MGP_PahariEiJ_G0024872	Exosc2	100	100.000	ENSMUSG00000039356	Exosc2	100	100.000	Mus_musculus
MGP_PahariEiJ_G0024872	Exosc2	100	100.000	MGP_SPRETEiJ_G0024332	Exosc2	100	100.000	Mus_spretus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSMPUG00000012686	EXOSC2	100	93.515	Mustela_putorius_furo
MGP_PahariEiJ_G0024872	Exosc2	100	94.237	ENSMLUG00000008776	EXOSC2	100	94.237	Myotis_lucifugus
MGP_PahariEiJ_G0024872	Exosc2	100	96.356	ENSNGAG00000019383	Exosc2	100	96.356	Nannospalax_galili
MGP_PahariEiJ_G0024872	Exosc2	100	75.768	ENSNBRG00000005453	exosc2	100	75.768	Neolamprologus_brichardi
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSNLEG00000012533	EXOSC2	100	94.198	Nomascus_leucogenys
MGP_PahariEiJ_G0024872	Exosc2	100	69.966	ENSMEUG00000000795	EXOSC2	100	69.966	Notamacropus_eugenii
MGP_PahariEiJ_G0024872	Exosc2	100	93.243	ENSOPRG00000008688	EXOSC2	65	96.970	Ochotona_princeps
MGP_PahariEiJ_G0024872	Exosc2	100	92.491	ENSODEG00000016880	-	100	92.491	Octodon_degus
MGP_PahariEiJ_G0024872	Exosc2	87	93.701	ENSODEG00000019513	-	100	93.701	Octodon_degus
MGP_PahariEiJ_G0024872	Exosc2	100	75.768	ENSONIG00000014086	exosc2	100	75.768	Oreochromis_niloticus
MGP_PahariEiJ_G0024872	Exosc2	100	84.983	ENSOANG00000001044	EXOSC2	100	84.983	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0024872	Exosc2	100	93.857	ENSOCUG00000007138	EXOSC2	100	93.857	Oryctolagus_cuniculus
MGP_PahariEiJ_G0024872	Exosc2	100	76.451	ENSORLG00000007443	exosc2	100	76.451	Oryzias_latipes
MGP_PahariEiJ_G0024872	Exosc2	100	76.451	ENSORLG00020018902	exosc2	100	76.451	Oryzias_latipes_hni
MGP_PahariEiJ_G0024872	Exosc2	100	76.792	ENSORLG00015006767	exosc2	100	76.792	Oryzias_latipes_hsok
MGP_PahariEiJ_G0024872	Exosc2	100	75.427	ENSOMEG00000003533	exosc2	100	75.427	Oryzias_melastigma
MGP_PahariEiJ_G0024872	Exosc2	100	94.881	ENSOGAG00000007558	EXOSC2	100	94.881	Otolemur_garnettii
MGP_PahariEiJ_G0024872	Exosc2	100	94.737	ENSOARG00000007438	EXOSC2	100	94.237	Ovis_aries
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSPPAG00000034796	EXOSC2	100	94.198	Pan_paniscus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSPPRG00000001089	EXOSC2	100	93.515	Panthera_pardus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSPTIG00000021163	EXOSC2	100	93.515	Panthera_tigris_altaica
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSPTRG00000045766	-	100	94.198	Pan_troglodytes
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSPTRG00000021476	EXOSC2	100	94.198	Pan_troglodytes
MGP_PahariEiJ_G0024872	Exosc2	100	94.737	ENSPANG00000025966	EXOSC2	100	94.539	Papio_anubis
MGP_PahariEiJ_G0024872	Exosc2	99	77.509	ENSPKIG00000004271	exosc2	98	77.509	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0024872	Exosc2	99	86.986	ENSPSIG00000006743	EXOSC2	99	86.986	Pelodiscus_sinensis
MGP_PahariEiJ_G0024872	Exosc2	86	77.866	ENSPMGG00000010980	exosc2	99	77.866	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0024872	Exosc2	100	98.649	ENSPEMG00000006345	Exosc2	100	97.952	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0024872	Exosc2	100	75.932	ENSPMAG00000001280	exosc2	100	75.932	Petromyzon_marinus
MGP_PahariEiJ_G0024872	Exosc2	100	91.126	ENSPCIG00000024122	EXOSC2	97	91.126	Phascolarctos_cinereus
MGP_PahariEiJ_G0024872	Exosc2	99	75.085	ENSPFOG00000019819	exosc2	99	75.085	Poecilia_formosa
MGP_PahariEiJ_G0024872	Exosc2	99	75.342	ENSPLAG00000004605	exosc2	99	75.342	Poecilia_latipinna
MGP_PahariEiJ_G0024872	Exosc2	99	75.342	ENSPMEG00000010976	exosc2	99	75.342	Poecilia_mexicana
MGP_PahariEiJ_G0024872	Exosc2	99	75.000	ENSPREG00000014306	exosc2	99	75.000	Poecilia_reticulata
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSPPYG00000019695	EXOSC2	100	93.857	Pongo_abelii
MGP_PahariEiJ_G0024872	Exosc2	100	94.539	ENSPCAG00000013400	EXOSC2	100	94.539	Procavia_capensis
MGP_PahariEiJ_G0024872	Exosc2	100	94.737	ENSPCOG00000017639	EXOSC2	100	94.539	Propithecus_coquereli
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSPVAG00000001513	EXOSC2	100	93.174	Pteropus_vampyrus
MGP_PahariEiJ_G0024872	Exosc2	100	76.109	ENSPNYG00000007383	exosc2	100	76.109	Pundamilia_nyererei
MGP_PahariEiJ_G0024872	Exosc2	100	79.252	ENSPNAG00000014281	exosc2	100	79.252	Pygocentrus_nattereri
MGP_PahariEiJ_G0024872	Exosc2	100	98.649	ENSRNOG00000009245	Exosc2	100	96.928	Rattus_norvegicus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSRBIG00000031203	-	100	94.198	Rhinopithecus_bieti
MGP_PahariEiJ_G0024872	Exosc2	99	86.986	ENSRBIG00000029791	-	99	86.986	Rhinopithecus_bieti
MGP_PahariEiJ_G0024872	Exosc2	99	85.274	ENSRROG00000043609	-	99	85.274	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSRROG00000010827	-	100	94.198	Rhinopithecus_roxellana
MGP_PahariEiJ_G0024872	Exosc2	89	40.203	YHR069C	-	82	40.203	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0024872	Exosc2	100	93.927	ENSSBOG00000022712	EXOSC2	100	93.857	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0024872	Exosc2	100	90.785	ENSSHAG00000016050	EXOSC2	100	90.785	Sarcophilus_harrisii
MGP_PahariEiJ_G0024872	Exosc2	100	76.792	ENSSFOG00015011245	exosc2	100	76.792	Scleropages_formosus
MGP_PahariEiJ_G0024872	Exosc2	100	75.427	ENSSMAG00000003112	exosc2	100	75.427	Scophthalmus_maximus
MGP_PahariEiJ_G0024872	Exosc2	100	75.338	ENSSDUG00000004634	exosc2	100	75.338	Seriola_dumerili
MGP_PahariEiJ_G0024872	Exosc2	100	76.109	ENSSLDG00000010616	exosc2	100	76.109	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0024872	Exosc2	99	85.424	ENSSPUG00000013391	EXOSC2	99	85.424	Sphenodon_punctatus
MGP_PahariEiJ_G0024872	Exosc2	100	76.109	ENSSPAG00000022947	exosc2	100	76.109	Stegastes_partitus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSSSCG00000005704	EXOSC2	100	94.198	Sus_scrofa
MGP_PahariEiJ_G0024872	Exosc2	99	83.562	ENSTGUG00000004697	EXOSC2	99	83.562	Taeniopygia_guttata
MGP_PahariEiJ_G0024872	Exosc2	100	72.355	ENSTRUG00000022436	exosc2	100	72.355	Takifugu_rubripes
MGP_PahariEiJ_G0024872	Exosc2	100	93.243	ENSTTRG00000015159	EXOSC2	100	86.689	Tursiops_truncatus
MGP_PahariEiJ_G0024872	Exosc2	100	93.243	ENSUAMG00000009651	EXOSC2	99	92.058	Ursus_americanus
MGP_PahariEiJ_G0024872	Exosc2	100	93.857	ENSUMAG00000018726	EXOSC2	100	93.857	Ursus_maritimus
MGP_PahariEiJ_G0024872	Exosc2	100	94.595	ENSVVUG00000027665	EXOSC2	100	93.174	Vulpes_vulpes
MGP_PahariEiJ_G0024872	Exosc2	100	78.840	ENSXETG00000001340	exosc2	100	78.840	Xenopus_tropicalis
MGP_PahariEiJ_G0024872	Exosc2	99	75.342	ENSXMAG00000005265	exosc2	99	75.342	Xiphophorus_maculatus