EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025147 (Gene tree)
Gene ID: 110317627
Gene Symbol: -
Alias: -
Full Name: CWC22 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 66951 bases
Position: chr3:63881017-63947967
Accession: 110317627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0063466	MA3	PF02847.17	3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0063468	-	1038	-	-	- (aa)	-	-
MGP_PahariEiJ_T0063469	-	2056	-	-	- (aa)	-	-
MGP_PahariEiJ_T0063466	-	2613	-	MGP_PahariEiJ_P0063466	736 (aa)	-	-
MGP_PahariEiJ_T0063467	-	2836	-	MGP_PahariEiJ_P0063467	904 (aa)	XP_021047848	UPI000A3139CB
MGP_PahariEiJ_T0063474	-	516	-	-	- (aa)	-	-
MGP_PahariEiJ_T0063473	-	419	-	-	- (aa)	-	-
MGP_PahariEiJ_T0063472	-	544	-	MGP_PahariEiJ_P0063472	110 (aa)	-	-
MGP_PahariEiJ_T0063471	-	692	-	MGP_PahariEiJ_P0063471	140 (aa)	-	-
MGP_PahariEiJ_T0063470	-	1898	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0025147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025147	-	90	93.853	ENSG00000163510	CWC22	99	88.606	Homo_sapiens
MGP_PahariEiJ_G0025147	-	78	78.957	ENSAPOG00000004200	cwc22	87	67.352	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025147	-	100	83.956	ENSAMEG00000011004	CWC22	100	83.846	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025147	-	80	81.186	ENSACIG00000020055	cwc22	88	69.279	Amphilophus_citrinellus
MGP_PahariEiJ_G0025147	-	79	81.197	ENSAPEG00000002673	cwc22	76	69.780	Amphiprion_percula
MGP_PahariEiJ_G0025147	-	79	81.880	ENSATEG00000005176	cwc22	63	76.876	Anabas_testudineus
MGP_PahariEiJ_G0025147	-	89	81.420	ENSACAG00000009438	CWC22	100	67.538	Anolis_carolinensis
MGP_PahariEiJ_G0025147	-	100	83.718	ENSANAG00000028324	CWC22	100	83.498	Aotus_nancymaae
MGP_PahariEiJ_G0025147	-	79	82.222	ENSACLG00000025447	cwc22	95	75.898	Astatotilapia_calliptera
MGP_PahariEiJ_G0025147	-	90	93.553	ENSBTAG00000021726	CWC22	99	82.618	Bos_taurus
MGP_PahariEiJ_G0025147	-	73	55.046	WBGene00002957	let-858	84	47.368	Caenorhabditis_elegans
MGP_PahariEiJ_G0025147	-	100	84.835	ENSCAFG00000014160	CWC22	99	84.835	Canis_familiaris
MGP_PahariEiJ_G0025147	-	92	93.947	ENSCAFG00020007223	CWC22	97	94.189	Canis_lupus_dingo
MGP_PahariEiJ_G0025147	-	90	93.103	ENSCHIG00000017150	CWC22	99	82.618	Capra_hircus
MGP_PahariEiJ_G0025147	-	90	80.150	ENSTSYG00000026635	-	98	71.429	Carlito_syrichta
MGP_PahariEiJ_G0025147	-	88	84.663	ENSTSYG00000035591	-	99	75.290	Carlito_syrichta
MGP_PahariEiJ_G0025147	-	96	75.115	ENSTSYG00000028686	-	98	73.984	Carlito_syrichta
MGP_PahariEiJ_G0025147	-	100	84.176	ENSTSYG00000000218	-	100	84.176	Carlito_syrichta
MGP_PahariEiJ_G0025147	-	90	79.829	ENSCAPG00000002064	CWC22	96	79.707	Cavia_aperea
MGP_PahariEiJ_G0025147	-	90	92.609	ENSCPOG00000007492	CWC22	100	82.262	Cavia_porcellus
MGP_PahariEiJ_G0025147	-	100	79.318	ENSCCAG00000021239	CWC22	100	78.878	Cebus_capucinus
MGP_PahariEiJ_G0025147	-	100	84.158	ENSCATG00000035788	CWC22	100	84.158	Cercocebus_atys
MGP_PahariEiJ_G0025147	-	96	92.102	ENSCLAG00000011118	CWC22	100	83.389	Chinchilla_lanigera
MGP_PahariEiJ_G0025147	-	100	84.268	ENSCSAG00000012925	CWC22	100	84.268	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025147	-	90	83.658	ENSCHOG00000006362	CWC22	88	83.408	Choloepus_hoffmanni
MGP_PahariEiJ_G0025147	-	89	84.187	ENSCPBG00000001765	CWC22	100	71.288	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025147	-	75	68.354	ENSCING00000008865	-	93	57.823	Ciona_intestinalis
MGP_PahariEiJ_G0025147	-	75	66.487	ENSCSAVG00000003537	-	83	73.182	Ciona_savignyi
MGP_PahariEiJ_G0025147	-	90	94.453	ENSCANG00000013762	CWC22	100	83.938	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025147	-	98	93.103	ENSCGRG00001017005	-	100	90.308	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025147	-	100	90.639	ENSCGRG00000001934	-	100	90.308	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025147	-	76	74.776	ENSCSEG00000005257	cwc22	63	73.413	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025147	-	79	81.100	ENSCVAG00000009836	cwc22	73	69.804	Cyprinodon_variegatus
MGP_PahariEiJ_G0025147	-	79	82.474	ENSDARG00000014008	cwc22	90	64.847	Danio_rerio
MGP_PahariEiJ_G0025147	-	90	66.617	ENSDNOG00000032640	-	90	66.419	Dasypus_novemcinctus
MGP_PahariEiJ_G0025147	-	100	84.447	ENSDNOG00000003020	-	100	84.337	Dasypus_novemcinctus
MGP_PahariEiJ_G0025147	-	89	94.554	ENSDORG00000011483	-	99	84.292	Dipodomys_ordii
MGP_PahariEiJ_G0025147	-	90	81.709	ENSETEG00000013355	CWC22	94	81.465	Echinops_telfairi
MGP_PahariEiJ_G0025147	-	100	84.505	ENSEASG00005022287	CWC22	99	84.396	Equus_asinus_asinus
MGP_PahariEiJ_G0025147	-	100	84.615	ENSECAG00000010769	CWC22	99	84.615	Equus_caballus
MGP_PahariEiJ_G0025147	-	81	95.053	ENSEEUG00000005336	CWC22	78	94.386	Erinaceus_europaeus
MGP_PahariEiJ_G0025147	-	80	81.864	ENSELUG00000010536	cwc22	92	77.365	Esox_lucius
MGP_PahariEiJ_G0025147	-	90	94.603	ENSFCAG00000018982	CWC22	99	84.066	Felis_catus
MGP_PahariEiJ_G0025147	-	90	81.994	ENSFALG00000003495	CWC22	99	69.508	Ficedula_albicollis
MGP_PahariEiJ_G0025147	-	90	93.223	ENSFDAG00000010857	CWC22	100	83.278	Fukomys_damarensis
MGP_PahariEiJ_G0025147	-	74	84.249	ENSFHEG00000009620	cwc22	77	68.305	Fundulus_heteroclitus
MGP_PahariEiJ_G0025147	-	86	77.057	ENSGMOG00000009084	cwc22	93	79.402	Gadus_morhua
MGP_PahariEiJ_G0025147	-	89	81.203	ENSGALG00000009001	CWC22	100	68.017	Gallus_gallus
MGP_PahariEiJ_G0025147	-	79	81.002	ENSGAFG00000021155	cwc22	88	71.193	Gambusia_affinis
MGP_PahariEiJ_G0025147	-	79	80.684	ENSGACG00000002071	cwc22	99	62.835	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025147	-	89	83.308	ENSGAGG00000013471	CWC22	100	70.306	Gopherus_agassizii
MGP_PahariEiJ_G0025147	-	90	93.853	ENSGGOG00000012484	CWC22	100	83.846	Gorilla_gorilla
MGP_PahariEiJ_G0025147	-	77	81.579	ENSHBUG00000010504	cwc22	72	76.480	Haplochromis_burtoni
MGP_PahariEiJ_G0025147	-	90	93.072	ENSHGLG00000005692	CWC22	100	82.946	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025147	-	90	93.072	ENSHGLG00100016497	CWC22	96	90.433	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025147	-	76	82.616	ENSHCOG00000004206	cwc22	80	72.779	Hippocampus_comes
MGP_PahariEiJ_G0025147	-	75	86.618	ENSIPUG00000005831	cwc22	70	76.029	Ictalurus_punctatus
MGP_PahariEiJ_G0025147	-	100	85.039	ENSSTOG00000009788	CWC22	100	85.479	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025147	-	100	84.176	ENSJJAG00000017012	-	100	85.604	Jaculus_jaculus
MGP_PahariEiJ_G0025147	-	80	80.068	ENSKMAG00000005228	cwc22	63	75.841	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025147	-	79	80.617	ENSLBEG00000020518	cwc22	73	72.222	Labrus_bergylta
MGP_PahariEiJ_G0025147	-	86	77.179	ENSLACG00000005916	CWC22	69	69.437	Latimeria_chalumnae
MGP_PahariEiJ_G0025147	-	90	75.585	ENSLOCG00000006456	cwc22	84	67.703	Lepisosteus_oculatus
MGP_PahariEiJ_G0025147	-	90	92.354	ENSLAFG00000014802	CWC22	100	82.096	Loxodonta_africana
MGP_PahariEiJ_G0025147	-	90	94.135	ENSMFAG00000000590	CWC22	99	84.688	Macaca_fascicularis
MGP_PahariEiJ_G0025147	-	99	80.311	ENSMMUG00000020642	CWC22	100	79.648	Macaca_mulatta
MGP_PahariEiJ_G0025147	-	100	84.158	ENSMNEG00000034567	CWC22	100	84.158	Macaca_nemestrina
MGP_PahariEiJ_G0025147	-	100	84.378	ENSMLEG00000042344	CWC22	100	84.378	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025147	-	82	79.602	ENSMAMG00000018888	cwc22	77	67.334	Mastacembelus_armatus
MGP_PahariEiJ_G0025147	-	79	82.393	ENSMZEG00005021449	cwc22	64	75.753	Maylandia_zebra
MGP_PahariEiJ_G0025147	-	82	85.246	ENSMGAG00000009220	CWC22	99	69.488	Meleagris_gallopavo
MGP_PahariEiJ_G0025147	-	79	89.736	ENSMAUG00000016154	-	95	89.736	Mesocricetus_auratus
MGP_PahariEiJ_G0025147	-	89	95.144	ENSMICG00000016919	CWC22	99	84.922	Microcebus_murinus
MGP_PahariEiJ_G0025147	-	83	74.062	ENSMMOG00000019720	cwc22	92	70.865	Mola_mola
MGP_PahariEiJ_G0025147	-	75	82.310	ENSMODG00000003711	-	100	82.310	Monodelphis_domestica
MGP_PahariEiJ_G0025147	-	90	88.120	ENSMODG00000010233	-	100	76.070	Monodelphis_domestica
MGP_PahariEiJ_G0025147	-	75	82.374	ENSMODG00000020117	-	100	82.374	Monodelphis_domestica
MGP_PahariEiJ_G0025147	-	100	97.554	MGP_CAROLIEiJ_G0023696	-	100	97.554	Mus_caroli
MGP_PahariEiJ_G0025147	-	91	95.846	ENSMUSG00000095824	Gm13697	99	95.537	Mus_musculus
MGP_PahariEiJ_G0025147	-	91	95.846	ENSMUSG00000079247	Gm13691	99	95.537	Mus_musculus
MGP_PahariEiJ_G0025147	-	91	95.697	ENSMUSG00000096729	Gm13695	99	95.416	Mus_musculus
MGP_PahariEiJ_G0025147	-	91	95.846	ENSMUSG00000096484	Gm13696	99	95.537	Mus_musculus
MGP_PahariEiJ_G0025147	-	91	95.846	ENSMUSG00000094336	Gm13693	99	95.537	Mus_musculus
MGP_PahariEiJ_G0025147	-	91	95.846	ENSMUSG00000096337	Gm13694	99	95.537	Mus_musculus
MGP_PahariEiJ_G0025147	-	91	95.846	ENSMUSG00000094125	Gm13698	99	95.537	Mus_musculus
MGP_PahariEiJ_G0025147	-	100	96.128	ENSMUSG00000027014	Cwc22	100	97.376	Mus_musculus
MGP_PahariEiJ_G0025147	-	90	94.003	ENSMPUG00000002432	CWC22	99	83.956	Mustela_putorius_furo
MGP_PahariEiJ_G0025147	-	90	92.470	ENSMLUG00000024966	-	97	86.323	Myotis_lucifugus
MGP_PahariEiJ_G0025147	-	89	85.502	ENSMLUG00000013437	-	98	84.848	Myotis_lucifugus
MGP_PahariEiJ_G0025147	-	99	77.519	ENSNGAG00000013881	-	98	91.967	Nannospalax_galili
MGP_PahariEiJ_G0025147	-	51	74.536	ENSNBRG00000019380	cwc22	88	75.862	Neolamprologus_brichardi
MGP_PahariEiJ_G0025147	-	100	83.846	ENSNLEG00000006248	CWC22	100	83.846	Nomascus_leucogenys
MGP_PahariEiJ_G0025147	-	77	84.248	ENSMEUG00000011026	CWC22	99	84.712	Notamacropus_eugenii
MGP_PahariEiJ_G0025147	-	73	97.660	ENSOPRG00000007844	CWC22	84	86.107	Ochotona_princeps
MGP_PahariEiJ_G0025147	-	74	89.809	ENSODEG00000005934	-	83	89.286	Octodon_degus
MGP_PahariEiJ_G0025147	-	78	95.340	ENSODEG00000007673	CWC22	93	95.000	Octodon_degus
MGP_PahariEiJ_G0025147	-	90	84.685	ENSOANG00000008649	CWC22	100	78.571	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0025147	-	87	77.922	ENSORLG00000010538	cwc22	68	76.677	Oryzias_latipes
MGP_PahariEiJ_G0025147	-	82	78.069	ENSORLG00020015117	cwc22	68	76.097	Oryzias_latipes_hni
MGP_PahariEiJ_G0025147	-	83	77.850	ENSORLG00015018073	cwc22	68	75.606	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025147	-	79	81.538	ENSOMEG00000015199	cwc22	76	70.292	Oryzias_melastigma
MGP_PahariEiJ_G0025147	-	89	93.912	ENSOGAG00000015287	CWC22	99	83.778	Otolemur_garnettii
MGP_PahariEiJ_G0025147	-	90	93.114	ENSOARG00000016905	CWC22	99	82.418	Ovis_aries
MGP_PahariEiJ_G0025147	-	89	93.912	ENSPPAG00000027833	CWC22	99	83.889	Pan_paniscus
MGP_PahariEiJ_G0025147	-	90	94.603	ENSPPRG00000001389	CWC22	99	84.176	Panthera_pardus
MGP_PahariEiJ_G0025147	-	90	94.603	ENSPTIG00000019139	CWC22	99	84.176	Panthera_tigris_altaica
MGP_PahariEiJ_G0025147	-	100	83.956	ENSPTRG00000012698	CWC22	100	83.956	Pan_troglodytes
MGP_PahariEiJ_G0025147	-	100	84.378	ENSPANG00000018976	CWC22	100	84.378	Papio_anubis
MGP_PahariEiJ_G0025147	-	77	84.119	ENSPKIG00000021346	cwc22	91	66.958	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025147	-	90	83.033	ENSPSIG00000008632	CWC22	100	71.460	Pelodiscus_sinensis
MGP_PahariEiJ_G0025147	-	77	72.656	ENSPMGG00000020129	cwc22	58	76.748	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025147	-	99	80.702	ENSPEMG00000023936	-	99	80.613	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025147	-	78	80.174	ENSPMAG00000005914	cwc22	95	65.700	Petromyzon_marinus
MGP_PahariEiJ_G0025147	-	90	88.722	ENSPCIG00000009903	-	92	88.657	Phascolarctos_cinereus
MGP_PahariEiJ_G0025147	-	76	85.125	ENSPFOG00000015025	cwc22	85	75.643	Poecilia_formosa
MGP_PahariEiJ_G0025147	-	76	83.333	ENSPLAG00000021405	cwc22	73	68.903	Poecilia_latipinna
MGP_PahariEiJ_G0025147	-	76	83.513	ENSPMEG00000007850	cwc22	72	70.346	Poecilia_mexicana
MGP_PahariEiJ_G0025147	-	76	80.859	ENSPREG00000004312	cwc22	85	67.014	Poecilia_reticulata
MGP_PahariEiJ_G0025147	-	100	83.846	ENSPPYG00000012986	CWC22	100	83.846	Pongo_abelii
MGP_PahariEiJ_G0025147	-	89	91.921	ENSPCAG00000011882	CWC22	99	81.514	Procavia_capensis
MGP_PahariEiJ_G0025147	-	92	87.113	ENSPCOG00000010195	CWC22	100	70.943	Propithecus_coquereli
MGP_PahariEiJ_G0025147	-	90	91.904	ENSPVAG00000011497	CWC22	99	83.718	Pteropus_vampyrus
MGP_PahariEiJ_G0025147	-	79	79.316	ENSPNYG00000010435	cwc22	93	73.867	Pundamilia_nyererei
MGP_PahariEiJ_G0025147	-	99	91.556	ENSRNOG00000038322	LOC500684	100	91.000	Rattus_norvegicus
MGP_PahariEiJ_G0025147	-	99	91.203	ENSRNOG00000012651	Cwc22	100	90.757	Rattus_norvegicus
MGP_PahariEiJ_G0025147	-	99	79.621	ENSRBIG00000036751	CWC22	99	79.734	Rhinopithecus_bieti
MGP_PahariEiJ_G0025147	-	90	94.153	ENSRROG00000037520	CWC22	100	84.048	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025147	-	68	30.572	YGR278W	-	84	30.667	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0025147	-	90	90.977	ENSSBOG00000021683	CWC22	100	81.608	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025147	-	90	71.988	ENSSHAG00000004040	-	91	70.404	Sarcophilus_harrisii
MGP_PahariEiJ_G0025147	-	86	89.465	ENSSHAG00000016596	-	99	76.844	Sarcophilus_harrisii
MGP_PahariEiJ_G0025147	-	70	82.812	ENSSFOG00015010559	cwc22	90	65.183	Scleropages_formosus
MGP_PahariEiJ_G0025147	-	79	77.436	ENSSMAG00000004724	cwc22	65	72.948	Scophthalmus_maximus
MGP_PahariEiJ_G0025147	-	80	80.339	ENSSDUG00000010656	cwc22	64	76.300	Seriola_dumerili
MGP_PahariEiJ_G0025147	-	77	82.301	ENSSLDG00000023157	cwc22	84	80.678	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025147	-	68	97.727	ENSSARG00000013596	-	64	95.028	Sorex_araneus
MGP_PahariEiJ_G0025147	-	88	79.141	ENSSPUG00000006395	CWC22	99	68.373	Sphenodon_punctatus
MGP_PahariEiJ_G0025147	-	79	81.026	ENSSPAG00000008746	cwc22	64	76.300	Stegastes_partitus
MGP_PahariEiJ_G0025147	-	90	93.853	ENSSSCG00000016008	CWC22	99	83.205	Sus_scrofa
MGP_PahariEiJ_G0025147	-	89	82.848	ENSTGUG00000009340	-	99	71.364	Taeniopygia_guttata
MGP_PahariEiJ_G0025147	-	83	77.414	ENSTRUG00000014411	cwc22	69	73.503	Takifugu_rubripes
MGP_PahariEiJ_G0025147	-	75	80.496	ENSTNIG00000005074	cwc22	88	71.471	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025147	-	95	69.319	ENSTBEG00000014539	CWC22	95	69.089	Tupaia_belangeri
MGP_PahariEiJ_G0025147	-	90	92.954	ENSTTRG00000012142	CWC22	99	82.508	Tursiops_truncatus
MGP_PahariEiJ_G0025147	-	93	92.231	ENSUAMG00000010342	CWC22	99	92.481	Ursus_americanus
MGP_PahariEiJ_G0025147	-	100	84.286	ENSUMAG00000016730	CWC22	99	84.176	Ursus_maritimus
MGP_PahariEiJ_G0025147	-	90	93.553	ENSVPAG00000008565	CWC22	73	93.274	Vicugna_pacos
MGP_PahariEiJ_G0025147	-	100	84.598	ENSVVUG00000009738	CWC22	99	84.598	Vulpes_vulpes
MGP_PahariEiJ_G0025147	-	89	80.030	ENSXETG00000014099	cwc22	99	74.708	Xenopus_tropicalis
MGP_PahariEiJ_G0025147	-	76	82.975	ENSXMAG00000013201	cwc22	73	68.036	Xiphophorus_maculatus