EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025160 (Gene tree)
Gene ID: 110318367
Gene Symbol: -
Alias: -
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 43015 bases
Position: chr3:66461838-66504852
Accession: 110318367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0063538	Nup35_RRM	PF05172.13	1.8e-26	1	1
MGP_PahariEiJ_P0063538	Nup35_RRM_2	PF14605.6	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0063538	-	1555	XM_021193362	MGP_PahariEiJ_P0063538	325 (aa)	XP_021049021	UPI000A30BCEC
MGP_PahariEiJ_T0063539	-	653	-	MGP_PahariEiJ_P0063539	197 (aa)	-	-
MGP_PahariEiJ_T0063536	-	2653	-	-	- (aa)	-	-
MGP_PahariEiJ_T0063541	-	632	-	-	- (aa)	-	-
MGP_PahariEiJ_T0063540	-	495	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0025160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025160	-	100	93.865	ENSG00000163002	NUP35	100	98.684	Homo_sapiens
MGP_PahariEiJ_G0025160	-	96	59.306	ENSAPOG00000003630	nup35	99	59.306	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025160	-	100	93.313	ENSAMEG00000001191	NUP35	100	93.313	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025160	-	79	59.459	ENSACIG00000023984	nup35	98	59.459	Amphilophus_citrinellus
MGP_PahariEiJ_G0025160	-	96	59.621	ENSAOCG00000007484	nup35	99	59.561	Amphiprion_ocellaris
MGP_PahariEiJ_G0025160	-	96	59.621	ENSAPEG00000020027	nup35	99	60.568	Amphiprion_percula
MGP_PahariEiJ_G0025160	-	96	59.048	ENSATEG00000019305	nup35	99	59.048	Anabas_testudineus
MGP_PahariEiJ_G0025160	-	99	83.025	ENSAPLG00000009161	NUP35	99	83.025	Anas_platyrhynchos
MGP_PahariEiJ_G0025160	-	100	79.027	ENSACAG00000008692	NUP35	100	79.027	Anolis_carolinensis
MGP_PahariEiJ_G0025160	-	100	92.638	ENSANAG00000021090	NUP35	100	92.638	Aotus_nancymaae
MGP_PahariEiJ_G0025160	-	96	58.232	ENSACLG00000013918	nup35	99	58.232	Astatotilapia_calliptera
MGP_PahariEiJ_G0025160	-	97	74.603	ENSAMXG00000003371	nup35	100	74.757	Astyanax_mexicanus
MGP_PahariEiJ_G0025160	-	100	94.190	ENSBTAG00000009777	NUP35	100	94.190	Bos_taurus
MGP_PahariEiJ_G0025160	-	100	93.558	ENSCJAG00000011104	NUP35	100	93.558	Callithrix_jacchus
MGP_PahariEiJ_G0025160	-	95	93.590	ENSCAFG00000031849	NUP35	100	93.590	Canis_familiaris
MGP_PahariEiJ_G0025160	-	100	92.705	ENSCAFG00020008408	NUP35	100	92.705	Canis_lupus_dingo
MGP_PahariEiJ_G0025160	-	95	94.839	ENSCHIG00000023148	NUP35	100	94.839	Capra_hircus
MGP_PahariEiJ_G0025160	-	100	92.923	ENSTSYG00000002117	NUP35	100	92.923	Carlito_syrichta
MGP_PahariEiJ_G0025160	-	100	75.684	ENSCAPG00000005703	NUP35	100	76.292	Cavia_aperea
MGP_PahariEiJ_G0025160	-	100	92.355	ENSCPOG00000011906	NUP35	100	92.966	Cavia_porcellus
MGP_PahariEiJ_G0025160	-	100	93.558	ENSCCAG00000025009	NUP35	100	93.558	Cebus_capucinus
MGP_PahariEiJ_G0025160	-	100	79.448	ENSCATG00000033109	NUP35	100	79.448	Cercocebus_atys
MGP_PahariEiJ_G0025160	-	100	91.743	ENSCLAG00000012559	NUP35	100	91.743	Chinchilla_lanigera
MGP_PahariEiJ_G0025160	-	100	93.558	ENSCSAG00000012620	NUP35	100	93.558	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025160	-	100	84.404	ENSCPBG00000001303	NUP35	100	84.404	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025160	-	95	41.195	ENSCING00000009659	-	97	41.195	Ciona_intestinalis
MGP_PahariEiJ_G0025160	-	95	44.315	ENSCSAVG00000007467	-	99	44.315	Ciona_savignyi
MGP_PahariEiJ_G0025160	-	100	93.558	ENSCANG00000030785	NUP35	100	94.175	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025160	-	100	96.923	ENSCGRG00001018638	-	100	96.923	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025160	-	100	96.923	ENSCGRG00000011313	-	100	96.923	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025160	-	96	57.862	ENSCSEG00000000938	nup35	99	57.862	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025160	-	96	60.252	ENSCVAG00000001792	nup35	99	60.252	Cyprinodon_variegatus
MGP_PahariEiJ_G0025160	-	95	72.347	ENSDARG00000012222	nup35	100	72.168	Danio_rerio
MGP_PahariEiJ_G0025160	-	100	91.437	ENSDNOG00000038754	-	100	91.437	Dasypus_novemcinctus
MGP_PahariEiJ_G0025160	-	100	92.049	ENSDNOG00000009513	-	88	92.049	Dasypus_novemcinctus
MGP_PahariEiJ_G0025160	-	100	92.331	ENSDORG00000010458	-	100	92.331	Dipodomys_ordii
MGP_PahariEiJ_G0025160	-	96	92.332	ENSETEG00000005896	NUP35	100	92.332	Echinops_telfairi
MGP_PahariEiJ_G0025160	-	96	53.846	ENSEBUG00000013034	nup35	99	54.180	Eptatretus_burgeri
MGP_PahariEiJ_G0025160	-	100	93.578	ENSEASG00005022100	NUP35	100	93.578	Equus_asinus_asinus
MGP_PahariEiJ_G0025160	-	99	93.252	ENSECAG00000003968	NUP35	100	93.548	Equus_caballus
MGP_PahariEiJ_G0025160	-	100	83.792	ENSEEUG00000008469	NUP35	100	83.792	Erinaceus_europaeus
MGP_PahariEiJ_G0025160	-	96	75.478	ENSELUG00000013693	nup35	100	75.484	Esox_lucius
MGP_PahariEiJ_G0025160	-	100	91.793	ENSFCAG00000025636	NUP35	100	92.308	Felis_catus
MGP_PahariEiJ_G0025160	-	100	81.098	ENSFALG00000013175	NUP35	100	81.098	Ficedula_albicollis
MGP_PahariEiJ_G0025160	-	100	92.638	ENSFDAG00000017998	NUP35	100	92.638	Fukomys_damarensis
MGP_PahariEiJ_G0025160	-	96	59.621	ENSFHEG00000010229	nup35	99	60.568	Fundulus_heteroclitus
MGP_PahariEiJ_G0025160	-	78	55.686	ENSGMOG00000003337	nup35	100	55.686	Gadus_morhua
MGP_PahariEiJ_G0025160	-	100	81.651	ENSGALG00000002689	NUP35	100	81.651	Gallus_gallus
MGP_PahariEiJ_G0025160	-	96	58.675	ENSGAFG00000022048	nup35	99	59.621	Gambusia_affinis
MGP_PahariEiJ_G0025160	-	96	59.365	ENSGACG00000008203	nup35	99	59.365	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025160	-	95	85.531	ENSGAGG00000001967	NUP35	100	85.531	Gopherus_agassizii
MGP_PahariEiJ_G0025160	-	100	93.865	ENSGGOG00000009919	NUP35	100	93.865	Gorilla_gorilla
MGP_PahariEiJ_G0025160	-	100	92.661	ENSHGLG00000013230	NUP35	100	92.661	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025160	-	96	77.778	ENSHGLG00000008616	-	96	77.778	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025160	-	96	72.930	ENSHGLG00000000414	-	97	72.930	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025160	-	100	92.661	ENSHGLG00100012840	NUP35	100	92.661	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025160	-	96	77.778	ENSHGLG00100000091	-	96	77.778	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025160	-	96	72.930	ENSHGLG00100010869	-	97	72.930	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025160	-	96	58.413	ENSHCOG00000003882	nup35	99	58.413	Hippocampus_comes
MGP_PahariEiJ_G0025160	-	100	65.951	ENSIPUG00000002798	nup35	100	65.951	Ictalurus_punctatus
MGP_PahariEiJ_G0025160	-	100	93.538	ENSSTOG00000000711	NUP35	100	93.538	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025160	-	100	93.558	ENSJJAG00000016432	-	100	93.558	Jaculus_jaculus
MGP_PahariEiJ_G0025160	-	85	86.643	ENSJJAG00000006387	-	93	86.643	Jaculus_jaculus
MGP_PahariEiJ_G0025160	-	99	85.981	ENSJJAG00000017434	-	99	85.981	Jaculus_jaculus
MGP_PahariEiJ_G0025160	-	100	79.141	ENSJJAG00000007003	-	98	79.141	Jaculus_jaculus
MGP_PahariEiJ_G0025160	-	96	57.500	ENSKMAG00000011162	nup35	98	59.062	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025160	-	96	47.170	ENSLBEG00000012416	nup35	99	47.170	Labrus_bergylta
MGP_PahariEiJ_G0025160	-	95	79.421	ENSLACG00000008247	NUP35	100	79.421	Latimeria_chalumnae
MGP_PahariEiJ_G0025160	-	96	71.019	ENSLOCG00000006726	nup35	99	71.019	Lepisosteus_oculatus
MGP_PahariEiJ_G0025160	-	100	92.169	ENSLAFG00000008155	NUP35	100	92.169	Loxodonta_africana
MGP_PahariEiJ_G0025160	-	100	93.252	ENSMFAG00000000834	NUP35	100	93.851	Macaca_fascicularis
MGP_PahariEiJ_G0025160	-	100	93.558	ENSMMUG00000004140	NUP35	100	93.558	Macaca_mulatta
MGP_PahariEiJ_G0025160	-	100	93.558	ENSMNEG00000029014	NUP35	100	93.558	Macaca_nemestrina
MGP_PahariEiJ_G0025160	-	100	93.558	ENSMLEG00000035422	NUP35	100	94.175	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025160	-	96	58.544	ENSMAMG00000013232	nup35	99	57.632	Mastacembelus_armatus
MGP_PahariEiJ_G0025160	-	97	59.133	ENSMZEG00005020619	nup35	95	59.133	Maylandia_zebra
MGP_PahariEiJ_G0025160	-	100	78.593	ENSMGAG00000004412	NUP35	100	78.593	Meleagris_gallopavo
MGP_PahariEiJ_G0025160	-	100	97.231	ENSMAUG00000013776	-	100	97.231	Mesocricetus_auratus
MGP_PahariEiJ_G0025160	-	100	93.578	ENSMICG00000006790	NUP35	100	94.839	Microcebus_murinus
MGP_PahariEiJ_G0025160	-	100	95.385	ENSMOCG00000014754	-	100	95.385	Microtus_ochrogaster
MGP_PahariEiJ_G0025160	-	97	57.812	ENSMMOG00000005026	nup35	99	57.911	Mola_mola
MGP_PahariEiJ_G0025160	-	100	86.462	ENSMODG00000010578	NUP35	100	86.462	Monodelphis_domestica
MGP_PahariEiJ_G0025160	-	96	59.248	ENSMALG00000020187	nup35	99	59.248	Monopterus_albus
MGP_PahariEiJ_G0025160	-	100	98.769	MGP_CAROLIEiJ_G0023709	-	100	98.769	Mus_caroli
MGP_PahariEiJ_G0025160	-	100	98.462	ENSMUSG00000026999	Nup35	100	98.462	Mus_musculus
MGP_PahariEiJ_G0025160	-	81	85.619	MGP_SPRETEiJ_G0033063	-	100	85.619	Mus_spretus
MGP_PahariEiJ_G0025160	-	100	93.617	ENSMPUG00000002063	NUP35	100	93.617	Mustela_putorius_furo
MGP_PahariEiJ_G0025160	-	100	93.272	ENSMLUG00000013154	NUP35	100	93.272	Myotis_lucifugus
MGP_PahariEiJ_G0025160	-	100	93.538	ENSNGAG00000012107	-	100	93.538	Nannospalax_galili
MGP_PahariEiJ_G0025160	-	96	57.994	ENSNBRG00000020466	nup35	97	58.621	Neolamprologus_brichardi
MGP_PahariEiJ_G0025160	-	100	93.865	ENSNLEG00000035026	NUP35	100	94.498	Nomascus_leucogenys
MGP_PahariEiJ_G0025160	-	65	65.258	ENSMEUG00000003001	-	65	65.258	Notamacropus_eugenii
MGP_PahariEiJ_G0025160	-	78	91.797	ENSOPRG00000016609	NUP35	78	91.797	Ochotona_princeps
MGP_PahariEiJ_G0025160	-	100	92.661	ENSODEG00000011202	-	100	92.661	Octodon_degus
MGP_PahariEiJ_G0025160	-	99	67.692	ENSODEG00000000280	-	99	67.692	Octodon_degus
MGP_PahariEiJ_G0025160	-	96	58.125	ENSONIG00000016251	nup35	99	57.012	Oreochromis_niloticus
MGP_PahariEiJ_G0025160	-	71	85.169	ENSOANG00000006793	-	97	85.169	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0025160	-	100	93.865	ENSOCUG00000014407	NUP35	100	93.865	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025160	-	96	59.688	ENSORLG00000013588	nup35	100	59.683	Oryzias_latipes
MGP_PahariEiJ_G0025160	-	96	59.688	ENSORLG00020008201	nup35	99	59.688	Oryzias_latipes_hni
MGP_PahariEiJ_G0025160	-	96	60.000	ENSORLG00015011096	nup35	100	60.000	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025160	-	96	58.934	ENSOMEG00000007628	nup35	99	58.934	Oryzias_melastigma
MGP_PahariEiJ_G0025160	-	100	92.966	ENSOGAG00000011920	NUP35	100	93.578	Otolemur_garnettii
MGP_PahariEiJ_G0025160	-	100	94.801	ENSOARG00000016728	NUP35	100	94.801	Ovis_aries
MGP_PahariEiJ_G0025160	-	100	93.865	ENSPPAG00000036316	NUP35	100	94.498	Pan_paniscus
MGP_PahariEiJ_G0025160	-	100	91.793	ENSPPRG00000024726	NUP35	100	92.628	Panthera_pardus
MGP_PahariEiJ_G0025160	-	100	92.097	ENSPTIG00000017299	NUP35	100	92.097	Panthera_tigris_altaica
MGP_PahariEiJ_G0025160	-	100	93.865	ENSPTRG00000012711	NUP35	100	94.498	Pan_troglodytes
MGP_PahariEiJ_G0025160	-	100	93.558	ENSPANG00000013686	NUP35	100	93.558	Papio_anubis
MGP_PahariEiJ_G0025160	-	95	73.397	ENSPKIG00000022051	nup35	99	73.397	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025160	-	95	85.161	ENSPSIG00000002146	NUP35	100	85.161	Pelodiscus_sinensis
MGP_PahariEiJ_G0025160	-	95	57.508	ENSPMGG00000022915	nup35	97	57.827	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025160	-	100	97.538	ENSPEMG00000014718	-	100	97.538	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025160	-	96	56.325	ENSPMAG00000006604	nup35	97	56.325	Petromyzon_marinus
MGP_PahariEiJ_G0025160	-	100	88.073	ENSPCIG00000015482	NUP35	100	88.073	Phascolarctos_cinereus
MGP_PahariEiJ_G0025160	-	96	58.360	ENSPFOG00000010020	nup35	99	59.306	Poecilia_formosa
MGP_PahariEiJ_G0025160	-	96	58.044	ENSPLAG00000005867	nup35	99	58.991	Poecilia_latipinna
MGP_PahariEiJ_G0025160	-	96	59.365	ENSPMEG00000010552	nup35	99	60.317	Poecilia_mexicana
MGP_PahariEiJ_G0025160	-	96	59.105	ENSPREG00000021005	nup35	99	60.064	Poecilia_reticulata
MGP_PahariEiJ_G0025160	-	100	93.558	ENSPPYG00000012998	-	80	93.558	Pongo_abelii
MGP_PahariEiJ_G0025160	-	96	65.176	ENSPCAG00000000605	NUP35	96	65.176	Procavia_capensis
MGP_PahariEiJ_G0025160	-	100	93.272	ENSPCOG00000024097	NUP35	100	93.884	Propithecus_coquereli
MGP_PahariEiJ_G0025160	-	100	94.190	ENSPVAG00000015908	NUP35	100	94.190	Pteropus_vampyrus
MGP_PahariEiJ_G0025160	-	97	59.443	ENSPNYG00000012486	nup35	95	59.443	Pundamilia_nyererei
MGP_PahariEiJ_G0025160	-	96	74.841	ENSPNAG00000005181	nup35	98	74.841	Pygocentrus_nattereri
MGP_PahariEiJ_G0025160	-	100	98.154	ENSRNOG00000009290	Nup35	100	98.154	Rattus_norvegicus
MGP_PahariEiJ_G0025160	-	100	93.558	ENSRBIG00000039427	NUP35	100	94.175	Rhinopithecus_bieti
MGP_PahariEiJ_G0025160	-	100	93.558	ENSRROG00000026525	NUP35	100	93.558	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025160	-	100	93.252	ENSSBOG00000018676	NUP35	100	93.252	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025160	-	100	87.768	ENSSHAG00000009746	NUP35	100	87.768	Sarcophilus_harrisii
MGP_PahariEiJ_G0025160	-	96	73.885	ENSSFOG00015002390	nup35	99	73.885	Scleropages_formosus
MGP_PahariEiJ_G0025160	-	96	57.778	ENSSMAG00000015651	nup35	99	57.778	Scophthalmus_maximus
MGP_PahariEiJ_G0025160	-	99	56.966	ENSSDUG00000013118	nup35	99	57.944	Seriola_dumerili
MGP_PahariEiJ_G0025160	-	96	59.048	ENSSLDG00000018249	nup35	98	59.048	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025160	-	96	69.551	ENSSARG00000001535	-	100	69.551	Sorex_araneus
MGP_PahariEiJ_G0025160	-	100	80.734	ENSSPUG00000018651	NUP35	100	80.734	Sphenodon_punctatus
MGP_PahariEiJ_G0025160	-	96	59.248	ENSSPAG00000018264	nup35	99	59.248	Stegastes_partitus
MGP_PahariEiJ_G0025160	-	100	93.884	ENSSSCG00000028949	NUP35	100	93.884	Sus_scrofa
MGP_PahariEiJ_G0025160	-	100	79.939	ENSTGUG00000011278	NUP35	100	79.939	Taeniopygia_guttata
MGP_PahariEiJ_G0025160	-	90	55.593	ENSTRUG00000014111	nup35	99	55.593	Takifugu_rubripes
MGP_PahariEiJ_G0025160	-	98	51.572	ENSTNIG00000011568	nup35	97	51.572	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025160	-	100	89.908	ENSTBEG00000003328	NUP35	100	89.908	Tupaia_belangeri
MGP_PahariEiJ_G0025160	-	100	79.692	ENSTTRG00000002512	NUP35	100	79.692	Tursiops_truncatus
MGP_PahariEiJ_G0025160	-	61	94.924	ENSUAMG00000018696	-	96	94.924	Ursus_americanus
MGP_PahariEiJ_G0025160	-	93	93.137	ENSUMAG00000017104	NUP35	100	93.137	Ursus_maritimus
MGP_PahariEiJ_G0025160	-	100	94.495	ENSVPAG00000011898	NUP35	100	94.495	Vicugna_pacos
MGP_PahariEiJ_G0025160	-	95	93.910	ENSVVUG00000016832	NUP35	100	93.910	Vulpes_vulpes
MGP_PahariEiJ_G0025160	-	100	64.242	ENSXETG00000001335	nup35	100	64.242	Xenopus_tropicalis
MGP_PahariEiJ_G0025160	-	96	58.360	ENSXMAG00000000409	nup35	99	59.306	Xiphophorus_maculatus