EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025177 (Gene tree)
Gene ID: 110318689
Gene Symbol: Clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 4967 bases
Position: chr3:70039505-70044471
Accession: 110318689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0063627	Clp1	PF06807.14	2.1e-30	1	1
MGP_PahariEiJ_P0063628	Clp1	PF06807.14	2.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0063627	-	2332	-	MGP_PahariEiJ_P0063627	425 (aa)	-	UPI000A30D3D1
MGP_PahariEiJ_T0063628	-	1878	XM_021193895	MGP_PahariEiJ_P0063628	425 (aa)	XP_021049554	UPI000A30D3D1
MGP_PahariEiJ_T0063629	-	1174	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0025177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSG00000172409	CLP1	100	98.353	Homo_sapiens
MGP_PahariEiJ_G0025177	Clp1	97	76.540	ENSAPOG00000008242	clp1	96	76.540	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSAMEG00000014551	CLP1	98	98.824	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSACIG00000006310	clp1	97	74.537	Amphilophus_citrinellus
MGP_PahariEiJ_G0025177	Clp1	100	75.520	ENSAOCG00000010681	clp1	100	75.520	Amphiprion_ocellaris
MGP_PahariEiJ_G0025177	Clp1	99	75.231	ENSAPEG00000012165	clp1	98	76.540	Amphiprion_percula
MGP_PahariEiJ_G0025177	Clp1	99	75.463	ENSATEG00000012374	clp1	98	75.463	Anabas_testudineus
MGP_PahariEiJ_G0025177	Clp1	100	93.176	ENSACAG00000007139	CLP1	100	93.176	Anolis_carolinensis
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSANAG00000034935	CLP1	100	98.353	Aotus_nancymaae
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSACLG00000013573	clp1	98	74.537	Astatotilapia_calliptera
MGP_PahariEiJ_G0025177	Clp1	100	77.598	ENSAMXG00000014194	clp1	100	77.598	Astyanax_mexicanus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSBTAG00000006493	CLP1	100	98.824	Bos_taurus
MGP_PahariEiJ_G0025177	Clp1	99	47.209	WBGene00010304	clpf-1	99	47.209	Caenorhabditis_elegans
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSCJAG00000008748	CLP1	100	98.353	Callithrix_jacchus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSCAFG00000007815	CLP1	100	98.824	Canis_familiaris
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSCAFG00020000903	CLP1	100	98.824	Canis_lupus_dingo
MGP_PahariEiJ_G0025177	Clp1	100	98.118	ENSCHIG00000023497	CLP1	100	98.118	Capra_hircus
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSTSYG00000006824	CLP1	99	98.353	Carlito_syrichta
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSCAPG00000009703	CLP1	100	98.824	Cavia_aperea
MGP_PahariEiJ_G0025177	Clp1	98	98.798	ENSCPOG00000012554	CLP1	99	98.798	Cavia_porcellus
MGP_PahariEiJ_G0025177	Clp1	100	98.118	ENSCCAG00000031957	CLP1	100	98.118	Cebus_capucinus
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSCATG00000044628	CLP1	100	98.353	Cercocebus_atys
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSCLAG00000004094	CLP1	100	98.588	Chinchilla_lanigera
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSCSAG00000005994	CLP1	100	98.353	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025177	Clp1	100	93.882	ENSCPBG00000016843	CLP1	100	93.882	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025177	Clp1	99	63.270	ENSCING00000003779	-	98	63.270	Ciona_intestinalis
MGP_PahariEiJ_G0025177	Clp1	99	63.121	ENSCSAVG00000003437	-	99	63.121	Ciona_savignyi
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSCANG00000034335	CLP1	100	98.353	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025177	Clp1	100	99.059	ENSCGRG00001002227	CLP1	100	99.059	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025177	Clp1	100	99.059	ENSCGRG00000004328	CLP1	100	99.059	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025177	Clp1	99	73.782	ENSCSEG00000008614	clp1	98	73.782	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025177	Clp1	99	75.000	ENSCVAG00000020101	clp1	98	75.000	Cyprinodon_variegatus
MGP_PahariEiJ_G0025177	Clp1	97	79.475	ENSDARG00000063663	clp1	95	79.475	Danio_rerio
MGP_PahariEiJ_G0025177	Clp1	99	98.349	ENSDNOG00000042415	CLP1	90	98.349	Dasypus_novemcinctus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSDORG00000014685	Clp1	100	98.824	Dipodomys_ordii
MGP_PahariEiJ_G0025177	Clp1	99	55.634	FBgn0033842	cbc	99	55.634	Drosophila_melanogaster
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSETEG00000003009	CLP1	100	98.588	Echinops_telfairi
MGP_PahariEiJ_G0025177	Clp1	97	72.397	ENSEBUG00000011648	clp1	97	72.397	Eptatretus_burgeri
MGP_PahariEiJ_G0025177	Clp1	100	98.118	ENSEASG00005002093	CLP1	100	98.118	Equus_asinus_asinus
MGP_PahariEiJ_G0025177	Clp1	100	98.118	ENSECAG00000011597	CLP1	100	98.118	Equus_caballus
MGP_PahariEiJ_G0025177	Clp1	100	97.647	ENSEEUG00000012771	CLP1	100	97.647	Erinaceus_europaeus
MGP_PahariEiJ_G0025177	Clp1	97	79.097	ENSELUG00000024048	clp1	95	79.097	Esox_lucius
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSFCAG00000006633	CLP1	100	98.588	Felis_catus
MGP_PahariEiJ_G0025177	Clp1	100	91.529	ENSFALG00000011145	CLP1	100	91.529	Ficedula_albicollis
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSFDAG00000000234	CLP1	100	98.588	Fukomys_damarensis
MGP_PahariEiJ_G0025177	Clp1	99	74.306	ENSFHEG00000014760	CLP1	98	74.306	Fundulus_heteroclitus
MGP_PahariEiJ_G0025177	Clp1	97	79.426	ENSGMOG00000019340	clp1	95	79.426	Gadus_morhua
MGP_PahariEiJ_G0025177	Clp1	100	92.235	ENSGALG00000007370	CLP1	100	92.235	Gallus_gallus
MGP_PahariEiJ_G0025177	Clp1	99	74.769	ENSGAFG00000003020	clp1	99	74.769	Gambusia_affinis
MGP_PahariEiJ_G0025177	Clp1	99	76.157	ENSGACG00000017832	clp1	98	76.157	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025177	Clp1	100	93.647	ENSGAGG00000013279	CLP1	100	93.647	Gopherus_agassizii
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSGGOG00000023006	CLP1	100	98.353	Gorilla_gorilla
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSHBUG00000010436	clp1	98	74.537	Haplochromis_burtoni
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSHGLG00000009914	CLP1	100	98.588	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSHGLG00100006105	CLP1	100	98.588	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025177	Clp1	99	76.092	ENSHCOG00000010072	clp1	99	76.092	Hippocampus_comes
MGP_PahariEiJ_G0025177	Clp1	97	79.286	ENSIPUG00000016238	clp1	94	79.097	Ictalurus_punctatus
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSSTOG00000029257	CLP1	100	98.588	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025177	Clp1	100	98.118	ENSJJAG00000023691	Clp1	100	98.118	Jaculus_jaculus
MGP_PahariEiJ_G0025177	Clp1	99	74.306	ENSKMAG00000011990	clp1	98	74.306	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025177	Clp1	99	75.694	ENSLBEG00000010201	clp1	98	75.694	Labrus_bergylta
MGP_PahariEiJ_G0025177	Clp1	100	85.176	ENSLACG00000003160	CLP1	100	85.176	Latimeria_chalumnae
MGP_PahariEiJ_G0025177	Clp1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSLAFG00000014907	CLP1	100	98.353	Loxodonta_africana
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSMFAG00000046074	CLP1	100	98.353	Macaca_fascicularis
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSMMUG00000038007	CLP1	99	98.353	Macaca_mulatta
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSMNEG00000000259	CLP1	100	98.353	Macaca_nemestrina
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSMLEG00000043556	CLP1	100	98.353	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025177	Clp1	100	75.058	ENSMAMG00000002149	clp1	98	75.058	Mastacembelus_armatus
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSMZEG00005002850	clp1	98	74.537	Maylandia_zebra
MGP_PahariEiJ_G0025177	Clp1	100	92.235	ENSMGAG00000009643	CLP1	100	92.235	Meleagris_gallopavo
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSMAUG00000016261	Clp1	100	98.353	Mesocricetus_auratus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSMICG00000004895	CLP1	100	98.824	Microcebus_murinus
MGP_PahariEiJ_G0025177	Clp1	100	99.294	ENSMOCG00000005498	Clp1	100	99.294	Microtus_ochrogaster
MGP_PahariEiJ_G0025177	Clp1	99	76.620	ENSMMOG00000003229	clp1	98	76.620	Mola_mola
MGP_PahariEiJ_G0025177	Clp1	100	97.412	ENSMODG00000020107	-	100	97.412	Monodelphis_domestica
MGP_PahariEiJ_G0025177	Clp1	100	97.412	ENSMODG00000024148	-	100	97.412	Monodelphis_domestica
MGP_PahariEiJ_G0025177	Clp1	100	74.365	ENSMALG00000014239	clp1	98	74.365	Monopterus_albus
MGP_PahariEiJ_G0025177	Clp1	100	99.765	MGP_CAROLIEiJ_G0023726	Clp1	100	99.765	Mus_caroli
MGP_PahariEiJ_G0025177	Clp1	100	99.765	ENSMUSG00000027079	Clp1	100	99.765	Mus_musculus
MGP_PahariEiJ_G0025177	Clp1	100	99.765	MGP_SPRETEiJ_G0024646	Clp1	100	99.765	Mus_spretus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSMPUG00000000268	CLP1	100	98.824	Mustela_putorius_furo
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSMLUG00000007904	CLP1	100	98.353	Myotis_lucifugus
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSNGAG00000006165	Clp1	100	98.588	Nannospalax_galili
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSNBRG00000005225	clp1	98	74.537	Neolamprologus_brichardi
MGP_PahariEiJ_G0025177	Clp1	82	92.929	ENSNLEG00000012809	-	100	92.929	Nomascus_leucogenys
MGP_PahariEiJ_G0025177	Clp1	100	97.412	ENSMEUG00000010949	CLP1	99	97.412	Notamacropus_eugenii
MGP_PahariEiJ_G0025177	Clp1	70	98.658	ENSOPRG00000007329	CLP1	100	98.658	Ochotona_princeps
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSODEG00000011410	CLP1	100	98.588	Octodon_degus
MGP_PahariEiJ_G0025177	Clp1	99	74.306	ENSONIG00000005089	clp1	98	74.306	Oreochromis_niloticus
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSOCUG00000007045	CLP1	100	98.588	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025177	Clp1	99	73.843	ENSORLG00000003647	clp1	98	73.843	Oryzias_latipes
MGP_PahariEiJ_G0025177	Clp1	99	73.611	ENSORLG00020016676	clp1	98	73.611	Oryzias_latipes_hni
MGP_PahariEiJ_G0025177	Clp1	99	73.843	ENSORLG00015019484	clp1	98	73.843	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025177	Clp1	99	74.483	ENSOMEG00000021303	clp1	99	74.483	Oryzias_melastigma
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSOGAG00000004508	CLP1	100	98.588	Otolemur_garnettii
MGP_PahariEiJ_G0025177	Clp1	100	97.176	ENSOARG00000010145	CLP1	98	97.176	Ovis_aries
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSPPAG00000041519	CLP1	100	98.353	Pan_paniscus
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSPPRG00000006135	CLP1	100	98.588	Panthera_pardus
MGP_PahariEiJ_G0025177	Clp1	100	98.588	ENSPTIG00000015866	CLP1	100	98.588	Panthera_tigris_altaica
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSPTRG00000047318	CLP1	100	98.353	Pan_troglodytes
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSPANG00000017078	CLP1	97	98.353	Papio_anubis
MGP_PahariEiJ_G0025177	Clp1	97	80.145	ENSPKIG00000007697	clp1	94	80.145	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025177	Clp1	95	91.294	ENSPSIG00000005468	CLP1	100	91.294	Pelodiscus_sinensis
MGP_PahariEiJ_G0025177	Clp1	97	77.672	ENSPMGG00000012171	clp1	96	77.672	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025177	Clp1	100	99.294	ENSPEMG00000011213	-	100	99.294	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025177	Clp1	100	76.526	ENSPMAG00000006707	clp1	100	76.526	Petromyzon_marinus
MGP_PahariEiJ_G0025177	Clp1	100	96.941	ENSPCIG00000011899	CLP1	99	96.941	Phascolarctos_cinereus
MGP_PahariEiJ_G0025177	Clp1	99	74.306	ENSPFOG00000008169	clp1	98	74.306	Poecilia_formosa
MGP_PahariEiJ_G0025177	Clp1	99	74.306	ENSPLAG00000022388	clp1	99	74.246	Poecilia_latipinna
MGP_PahariEiJ_G0025177	Clp1	99	74.306	ENSPMEG00000021088	clp1	99	74.246	Poecilia_mexicana
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSPREG00000017802	clp1	98	74.537	Poecilia_reticulata
MGP_PahariEiJ_G0025177	Clp1	53	98.661	ENSPPYG00000003266	-	100	98.661	Pongo_abelii
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSPCOG00000000360	CLP1	98	98.824	Propithecus_coquereli
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSPVAG00000016270	CLP1	100	98.824	Pteropus_vampyrus
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSPNYG00000017274	clp1	97	74.537	Pundamilia_nyererei
MGP_PahariEiJ_G0025177	Clp1	97	80.000	ENSPNAG00000026460	clp1	95	80.048	Pygocentrus_nattereri
MGP_PahariEiJ_G0025177	Clp1	100	99.765	ENSRNOG00000007416	Clp1	100	99.765	Rattus_norvegicus
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSRBIG00000018191	CLP1	100	98.353	Rhinopithecus_bieti
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSRROG00000039265	CLP1	100	98.353	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSSBOG00000032517	-	100	98.353	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025177	Clp1	96	79.064	ENSSBOG00000010558	-	93	79.064	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025177	Clp1	100	97.647	ENSSHAG00000015695	CLP1	100	97.647	Sarcophilus_harrisii
MGP_PahariEiJ_G0025177	Clp1	97	78.824	ENSSFOG00015000628	clp1	96	78.824	Scleropages_formosus
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSSMAG00000019423	clp1	97	74.537	Scophthalmus_maximus
MGP_PahariEiJ_G0025177	Clp1	99	75.926	ENSSDUG00000014495	clp1	98	75.926	Seriola_dumerili
MGP_PahariEiJ_G0025177	Clp1	99	75.694	ENSSLDG00000000937	clp1	98	75.694	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025177	Clp1	52	98.206	ENSSARG00000002459	CLP1	100	98.206	Sorex_araneus
MGP_PahariEiJ_G0025177	Clp1	100	92.471	ENSSPUG00000016811	CLP1	100	92.471	Sphenodon_punctatus
MGP_PahariEiJ_G0025177	Clp1	97	76.066	ENSSPAG00000016052	clp1	96	76.066	Stegastes_partitus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSSSCG00000031442	CLP1	100	98.824	Sus_scrofa
MGP_PahariEiJ_G0025177	Clp1	100	91.294	ENSTGUG00000007002	CLP1	100	91.294	Taeniopygia_guttata
MGP_PahariEiJ_G0025177	Clp1	99	75.935	ENSTRUG00000012602	clp1	98	75.935	Takifugu_rubripes
MGP_PahariEiJ_G0025177	Clp1	99	75.467	ENSTNIG00000013125	clp1	98	75.467	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025177	Clp1	100	97.647	ENSTBEG00000009975	CLP1	100	97.647	Tupaia_belangeri
MGP_PahariEiJ_G0025177	Clp1	100	98.353	ENSTTRG00000002096	CLP1	100	98.353	Tursiops_truncatus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSUAMG00000011388	CLP1	100	98.824	Ursus_americanus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSUMAG00000018317	CLP1	100	98.824	Ursus_maritimus
MGP_PahariEiJ_G0025177	Clp1	100	98.824	ENSVVUG00000017138	CLP1	97	98.824	Vulpes_vulpes
MGP_PahariEiJ_G0025177	Clp1	98	77.458	ENSXETG00000007088	clp1	95	78.177	Xenopus_tropicalis
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSXCOG00000002287	clp1	98	74.537	Xiphophorus_couchianus
MGP_PahariEiJ_G0025177	Clp1	99	74.537	ENSXMAG00000009783	clp1	98	74.537	Xiphophorus_maculatus